Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f08r
(756 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 26 0.37
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 26 0.37
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 23 2.6
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 23 2.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 2.6
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 8.0
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 8.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 8.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.0
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 215 PGCR-VSTCSHSRAYELYASTVRHN 144
PGC V +CS+ + E +A +RHN
Sbjct: 376 PGCHMVDSCSNIQTGEQFARLLRHN 400
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 215 PGCR-VSTCSHSRAYELYASTVRHN 144
PGC V +CS+ + E +A +RHN
Sbjct: 383 PGCHMVDSCSNIQTGEQFARLLRHN 407
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 582 VHNNNVAVGDGQQGG 626
V+NN + GDG GG
Sbjct: 505 VYNNKIPTGDGALGG 519
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +2
Query: 137 RNDCDEQWRRTIRRLDCESRY*LCNPVGGFCHRWGKSHHE 256
R D ++ ++ + E R N V FC K+H E
Sbjct: 282 RTDLVPAFQNLLKDTEAEVRAAAANKVKDFCQNLDKAHQE 321
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +3
Query: 366 RIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSID 545
R ++G+ S + SS +++ + + + P+ ++ PD++ SD D
Sbjct: 803 RERSGSESSSISERCSSRVESLTPERKM-EPPGVPLNSTPRSTPDKREKSPTSDKAQEAD 861
Query: 546 GSVV 557
G VV
Sbjct: 862 GEVV 865
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 663 QQRKLRCEHHDPPRLAGRLRLQRYCCGL 580
Q R+++ + D P AG+ CC L
Sbjct: 166 QNRRVKYKKEDLPAAAGKASNGNKCCCL 193
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 312 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 464
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 312 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 464
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 312 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 464
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 312 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 464
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 312 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 464
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 96 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 147
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 312 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 464
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.0
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 312 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 464
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,377
Number of Sequences: 336
Number of extensions: 5301
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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