Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f08r
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.11
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 1.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.4
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 5.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.4
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 5.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.4
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.11
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 523 PTLGTPLTAVLYRPLARPRQST 588
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 345 TTPPGPSRIQTGNPVGSATSLSSS 416
TTP PSR Q+ + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.8 bits (49), Expect = 1.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 755 HQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGN 651
+ IT GN N+ ++N N N +G N NGN
Sbjct: 225 NSTITAGNANTNASNNNNNNNNNNNNNNGANDNGN 259
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 740 NGNVNSIRNSNYNGNL 693
NGN N N+N NG++
Sbjct: 257 NGNGNGASNNNNNGDM 272
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 573 TTPVHNNNVAVGDGQQGGAD 632
+ P +N + GDG++GGA+
Sbjct: 1052 SNPSYNFSSVSGDGEEGGAE 1071
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 573 TTPVHNNNVAVGDGQQGGAD 632
+ P +N + GDG++GGA+
Sbjct: 1048 SNPSYNFSSVSGDGEEGGAE 1067
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 740 NGNVNSIRNSNYNGN 696
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 740 NGNVNSIRNSNYNGN 696
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 181 RL*EQVLTLQPGWGFLPPLG*KSP 252
R+ + LQPG F PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.4
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -2
Query: 698 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 522
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 521 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 435
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 740 NGNVNSIRNSNYNGNLPLF 684
N N N+ N+NYN L+
Sbjct: 335 NNNYNNYNNNNYNNYKKLY 353
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.4
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -2
Query: 698 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 522
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 521 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 435
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 740 NGNVNSIRNSNYNGN 696
N N N+ N+NYN N
Sbjct: 332 NYNNNNYNNNNYNNN 346
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 421 VTLDDRLVADPTGLPVW 371
+TLDD++ P P+W
Sbjct: 643 MTLDDKVFGFPLDRPMW 659
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 421 VTLDDRLVADPTGLPVW 371
+TLDD++ P P+W
Sbjct: 643 MTLDDKVFGFPLDRPMW 659
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 734 NVNSIRNSNYNGN 696
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 734 NVNSIRNSNYNGN 696
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 734 NVNSIRNSNYNGN 696
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 734 NVNSIRNSNYNGN 696
N N+ N+NYN N
Sbjct: 93 NYNNYNNNNYNNN 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,527
Number of Sequences: 438
Number of extensions: 6448
Number of successful extensions: 29
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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