Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f08f
(586 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 32 0.32
At2g37925.1 68415.m04655 copper transporter family protein simil... 31 0.75
At5g15860.2 68418.m01856 expressed protein 29 1.7
At5g15860.1 68418.m01855 expressed protein 29 1.7
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 29 2.3
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 29 3.0
At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein si... 28 4.0
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 4.0
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 28 4.0
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 28 5.3
At1g26390.1 68414.m03219 FAD-binding domain-containing protein s... 28 5.3
At4g21585.1 68417.m03124 bifunctional nuclease, putative similar... 27 7.0
At3g55160.1 68416.m06126 expressed protein 27 7.0
At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138... 27 7.0
At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containi... 27 7.0
At4g28680.1 68417.m04098 tyrosine decarboxylase, putative simila... 27 9.2
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 27 9.2
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 9.2
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 27 9.2
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 27 9.2
At2g16650.1 68415.m01911 expressed protein 27 9.2
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 31.9 bits (69), Expect = 0.32
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 577 PKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPL-TAVLYRPLARPRQSTTITL 413
P L P +T+P LPPP N PTL P+ T +Y+P P T TL
Sbjct: 68 PTLSPPVYTKPTLPPPAYTPPV----YNKPTLPAPVYTPPVYKPTLSPPVYTKPTL 119
>At2g37925.1 68415.m04655 copper transporter family protein similar
to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis
thaliana}; contains Pfam profile PF04145: Ctr copper
transporter family; supporting cDNA
gi|18496855|gb|AF466372.1|
Length = 145
Score = 30.7 bits (66), Expect = 0.75
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 330 VIVHGWNSNGNSAVNTMIRPALLAVS-----DCNVIVVDWRGLANGLYNTAV 470
V+V WN+ + T RP+LL + +C V+ W G G+Y A+
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALAL 59
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 29.5 bits (63), Expect = 1.7
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +3
Query: 300 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 473
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 474 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAH 584
F+ N I+ GG+ R++L+G S GAH
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAH 239
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 29.5 bits (63), Expect = 1.7
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +3
Query: 300 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 473
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 474 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAH 584
F+ N I+ GG+ R++L+G S GAH
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAH 239
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 363 SAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV-----WLIN 527
SA+N+++ A +AV+ V+ W+ LA ++ VP V +F+G F + WL
Sbjct: 181 SAINSLVMCASVAVTYLLGSVISWQKLA------LISTVPCVFEFVGLFFIPESPRWLSR 234
Query: 528 NG 533
NG
Sbjct: 235 NG 236
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 577 PKLKPIKWTRPQLPPPLLMSQT-KKLP-RNCPTLGTPL-TAVLYRPLARP 437
P L P +T+P +PPP+ K P PT+ P+ T +Y+P P
Sbjct: 102 PTLSPPVYTKPTIPPPVYTPPVYKPTPVYTKPTIPPPVYTPPVYKPTPSP 151
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = -1
Query: 577 PKLKPIKWTRPQLPPPL----LMSQTKKLP-RNCPTLGTPL-TAVLYRPLARPRQSTTIT 416
P L P +T+P +PPP+ + T P PT+ P+ T +Y+P P T T
Sbjct: 54 PTLSPPVYTKPTIPPPVYTPPVYKHTPSPPVYTKPTIPPPVYTPPVYKPTLSPPVYTKPT 113
Query: 415 L 413
+
Sbjct: 114 I 114
>At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase, basic
vacuolar isoform precursor SP:P52407 from [Hevea
brasiliensis]
Length = 306
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 228 WLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 374
W +R QN + + +++ S G+LP+ V GW SNG +A +
Sbjct: 222 WDGSRGYQNLFDALLDVVYSAVERSG-GGSLPVVVSESGWPSNGGNAAS 269
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 201 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 374
+ NG NN N NN NGN N+ N+N N N +G N+NGN+ N
Sbjct: 87 NNNGNNNN----DNNNGNNKDNNNNGNNNNGNNNNGNDN-------NGNNNNGNNNDN 133
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 396 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 575
L+ D V +D+R G + V S F+ N + GG+ R++L+G S
Sbjct: 232 LSERDIIVACIDYRNFPQGSISDMVKDASSGISFVCNHIA----EYGGDPDRIYLMGQSA 287
Query: 576 GAH 584
GAH
Sbjct: 288 GAH 290
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 396 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 575
LA D V +D+R G + V+ F+ N I+ GG+ R++L+G S
Sbjct: 176 LAERDIIVACLDYRNFPQGTISDMVSDAAQGISFVCNN----ISAFGGDPNRIYLMGQSA 231
Query: 576 GAH 584
GAH
Sbjct: 232 GAH 234
>At1g26390.1 68414.m03219 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 530
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 14 QHEAPTSAGWLNSIVFWQCYP 76
+HE WLNS +FW YP
Sbjct: 330 KHEDCQEMSWLNSTLFWADYP 350
>At4g21585.1 68417.m03124 bifunctional nuclease, putative similar to
bifunctional nuclease [Zinnia elegans]
gi|4099833|gb|AAD00694
Length = 299
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 165 DLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFV 332
D+ +P L G N + RR N H V N + S + YN +LPL +
Sbjct: 151 DIHQPLHVGFL-GDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKSLPLMI 205
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 27.5 bits (58), Expect = 7.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 41 WLNSIVFWQCYPHDPWRQQ 97
WL+S ++ CYP P+R++
Sbjct: 762 WLSSFLYLSCYPSAPYRRK 780
>At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 579
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -1
Query: 526 LMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLF 347
+ S +KL CP +T +L R L PR + E + T+EFP L+
Sbjct: 397 MTSNERKLAGLCPLNAKEVTRLL-RALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLY 455
Query: 346 QPWTI 332
+ I
Sbjct: 456 NKYDI 460
>At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -3
Query: 287 VDIAICNNLMVVLV---TSGEKPVLVVCTVP*HKDVFLGRFFQVNEVRNTLAIRHPNVSA 117
VD+ + + VL + G P +V+C + H LGRF + +V +L R
Sbjct: 423 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 482
Query: 116 YTF 108
YTF
Sbjct: 483 YTF 485
>At4g28680.1 68417.m04098 tyrosine decarboxylase, putative similar
to SP|P54768 Tyrosine/DOPA decarboxylase 1 [Includes:
DOPA decarboxylase (EC 4.1.1.28) (DDC); Tyrosine
decarboxylase (EC 4.1.1.25)] {Papaver somniferum},
SP|Q06086 Tyrosine decarboxylase 2 (EC 4.1.1.25)
{Petroselinum crispum}; contains Pfam profile PF00282:
Pyridoxal-dependent decarboxylase conserved domain
Length = 545
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 237 TRRNQNNHQVITNGNVNSIRNSNYNGN 317
T +N TNGN ++ N NYNGN
Sbjct: 14 TGNGYSNGNGYTNGNGHTNGNGNYNGN 40
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 246 NQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCN 416
N N + N NV +I + + NL +FV H N + +V+ ++ ++ AV +C+
Sbjct: 33 NNNKKKNNNNNNVRNIHVAAFEKNLNVFVRDH--LENCSVSVDDVVDDSIKAVPECS 87
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 380 DPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWSSQCRT 493
D P L ++YC G + SC+ + C SQCR+
Sbjct: 620 DCPCLTNETCCEKYC-GCSKSCKNRFRGCHCAKSQCRS 656
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 578 AQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 474
A A+++ +P+A+ V +P V E S GN+
Sbjct: 779 ASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 578 AQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 474
A A+++ +P+A+ V +P V E S GN+
Sbjct: 779 ASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At2g16650.1 68415.m01911 expressed protein
Length = 511
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 311 WKPASLCYCPRLEQQRKLRCEHH 379
+ PA LC+C +LE ++ E H
Sbjct: 149 YAPALLCFCEKLEAEKGYEVEEH 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,257,696
Number of Sequences: 28952
Number of extensions: 323995
Number of successful extensions: 1321
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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