Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10f06f
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/62 (19%), Positives = 22/62 (35%)
 Frame = -3

Query: 387  WVMFLETVWREPPEFHWFVPTVRRRFPERLPSVNTATMQ*AAVSTERAVSTEPPQTKLLM 208
            W     T W       W+  T  RR     P+  + T +    +     +T PP   ++ 
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMP 1094

Query: 207  KI 202
            ++
Sbjct: 1095 EV 1096


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 167 PELPGYPPQYERSG 126
           P LPGY P Y R G
Sbjct: 395 PALPGYVPVYIRPG 408


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 167 PELPGYPPQYERSG 126
           P LPGY P Y R G
Sbjct: 220 PALPGYVPVYIRPG 233


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 203 YH*SLLPYGGGCPELPGYPPQYERS 129
           Y  ++L Y G     P Y P Y+ S
Sbjct: 360 YQVAVLEYKGTQTNYPSYEPTYDNS 384


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 77  PRQPQRAPQKVFRILCSFLPSPESD 3
           PR P RA    +  +   +P PE++
Sbjct: 56  PRDPNRARSVSYSTVIQSVPHPETE 80


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 187 YHMGVAALSCLATPHNTSVPV 125
           YH  +A ++C+  P     PV
Sbjct: 164 YHQFLAIIACMGPPPQPEPPV 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,545
Number of Sequences: 336
Number of extensions: 3361
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)