Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f05r
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 52 3e-07
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 44 1e-04
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 31 0.63
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z99942-6|CAI79199.1| 119|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical ... 28 7.8
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 52.4 bits (120), Expect = 3e-07
Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 8/189 (4%)
Frame = -1
Query: 717 PYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC-----TATRVTIVIRAGTVNMT-RPA 556
P+ +LR N + CGA+I+ +TAAHC + +V+ N T
Sbjct: 39 PWTAALR--NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNE 96
Query: 555 VVFETTDYLNHPLYDESIQQIVQPHDIGLIKFG-RSLVFNDYVQPIRLQSSYHKDYNY-D 382
+F +PLY + + HDI +++ + FN+Y QPI L S KD+ Y
Sbjct: 97 QIFYLQRIHFYPLYKD-----IFSHDIAILEIPYPGIEFNEYAQPICLPS---KDFVYTP 148
Query: 381 GYRLTATGWGRTWTNGTAPENMNWVFLRGVTNAFCSEIFVINNIVQDSTICASGYNVTSQ 202
G + +GWG E + + + C I + + S CA GY
Sbjct: 149 GRQCVVSGWGSMGLR--YAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCA-GYLEGGI 205
Query: 201 STCQGDSGG 175
+CQGDSGG
Sbjct: 206 DSCQGDSGG 214
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 44.0 bits (99), Expect = 1e-04
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 5/171 (2%)
Frame = -1
Query: 666 CGATIIHSDWGLTAAHCTATR---VTIVIRAGTVNMTRPAVVFETTDYLNHPLYDESIQQ 496
CG ++I ++ LTAAHC A + +R G + + T HP Y+
Sbjct: 84 CGGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGG-HRSGSGSPHRVTAVSIHPWYNIGFPS 142
Query: 495 IVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWTNGT-APEN 319
+D +++ + + +PI L S + TGWG T + +
Sbjct: 143 ---SYDFAIMRIHPPVNTSTTARPICLPSLPAVENRL----CVVTGWGSTIEGSSLSAPT 195
Query: 318 MNWVFLRGVTNAFCSEI-FVINNIVQDSTICASGYNVTSQSTCQGDSGGGL 169
+ + + ++ FCS + I I S +CA GY+ +CQGDSGG L
Sbjct: 196 LREIHVPLLSTLFCSSLPNYIGRIHLPSMLCA-GYSYGKIDSCQGDSGGPL 245
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 42.3 bits (95), Expect = 3e-04
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Frame = -1
Query: 483 HDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWT-NGTAPENMNWV 307
HD +++ + + F++ V+PI L + Y L GWGR + +G +
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLP----RPNMYYTKSLAVPGWGRIFNESGPLIHEIPMR 198
Query: 306 FLRGVTNAFCSEIFVINNIVQDSTICASGYNVTSQS---TCQGDSGGGLTXXXXXXXXXX 136
R + + D ICA+ NV++ S TC GDSGGGL
Sbjct: 199 IDRDCKRPWSDRL----PADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAF 254
Query: 135 XGISSFVSSTGCHTDYPAGFIRPGHYHDWYLEVTGI 28
+ + GC ++ A F R Y + TG+
Sbjct: 255 LIAITSFGTRGCPSNMLARFTRVDMYLNLICNYTGV 290
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 666 CGATIIHSDWGLTAAHCT---ATRVTIVIRAGTVNMTRPAVVFE 544
CGAT+I W +TAAHC TR + +R N R V E
Sbjct: 66 CGATVIDDFWLVTAAHCALQLQTRSFVYVREPKNNRERSFSVKE 109
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 687 PEGAVNACGATIIHSDWGLTAAHCTAT----RVTIVIRAGTVNMTR 562
P+G N CG +I +T+AHC + VT + G V++ +
Sbjct: 39 PDGTTNVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNK 84
>Z99942-6|CAI79199.1| 119|Caenorhabditis elegans Hypothetical
protein H13N06.7 protein.
Length = 119
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 553 CFRDDRLFKPPTLRRIDTADCTTSRHRPHQVWTL 452
CF+ RL + R DT++C + P + WTL
Sbjct: 52 CFKSSRLENVKSCREADTSNCAAPEY-PTRKWTL 84
>Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical
protein F10F2.3 protein.
Length = 325
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 405 YHKDYNYDGYRLTATGWGRTWTNGT 331
Y + NY L AT WG TW +G+
Sbjct: 97 YFLEQNYTEAELYATTWGDTWGSGS 121
>AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical
protein H12I13.3 protein.
Length = 549
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -1
Query: 549 FETTDY-LNHPLYDESIQQIV 490
F+ +DY NHPLYDES ++++
Sbjct: 450 FDFSDYPKNHPLYDESNKKVI 470
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,609,479
Number of Sequences: 27780
Number of extensions: 337942
Number of successful extensions: 871
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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