Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f03f
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 265 7e-70
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 248 1e-64
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 160 1e-59
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 213 2e-54
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 179 5e-44
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 175 8e-43
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 161 1e-38
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 156 5e-37
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 142 5e-33
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 135 1e-30
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 120 3e-26
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 105 9e-22
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 46 4e-16
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 65 3e-14
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 77 5e-13
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 41 3e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 73 5e-12
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 46 6e-10
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 38 8e-06
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 50 4e-05
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 36 6e-04
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 33 0.004
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 41 0.023
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 36 0.10
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 31 1.5
UniRef50_Q0PAV1 Cluster: Putative uncharacterized protein; n=3; ... 33 6.0
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 265 bits (649), Expect = 7e-70
Identities = 132/199 (66%), Positives = 144/199 (72%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL Q
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYA
Sbjct: 40 ---DKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG E+NVEPVD+GPGAFRC+LDVGLARTTTG
Sbjct: 97 AAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
ARVFGAMKGAVDGGLN+PH
Sbjct: 157 ARVFGAMKGAVDGGLNIPH 175
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 248 bits (606), Expect = 1e-64
Identities = 123/199 (61%), Positives = 139/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 157 NKVFGALKGAVDGGLSIPH 175
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 160 bits (388), Expect(2) = 1e-59
Identities = 81/113 (71%), Positives = 87/113 (76%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQ
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 394
DKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 40 ---DKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 93.1 bits (221), Expect(2) = 1e-59
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +2
Query: 512 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 652
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PH
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPH 144
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 213 bits (521), Expect = 2e-54
Identities = 110/199 (55%), Positives = 128/199 (64%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQ
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY+TG +YNVE + F+ LD+GLARTTTG
Sbjct: 97 AAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTG 155
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+++F MKG DGG+NVPH
Sbjct: 156 SKIFAVMKGVADGGINVPH 174
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 179 bits (436), Expect = 5e-44
Identities = 94/196 (47%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
Frame = +2
Query: 71 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSVAHW 244
V K Y RYQVKF RRR G KTDY AR+RL+ Q
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQ------------------------ 48
Query: 245 DKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAY 424
DKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y
Sbjct: 49 DKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATY 108
Query: 425 STGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARV 604
+TG +Y+VE D F+C+LD GL RT+TGARV
Sbjct: 109 ATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARV 168
Query: 605 FGAMKGAVDGGLNVPH 652
F A+KGAVDGGL++PH
Sbjct: 169 FAALKGAVDGGLDIPH 184
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 175 bits (426), Expect = 8e-43
Identities = 95/205 (46%), Positives = 122/205 (59%), Gaps = 6/205 (2%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+Q
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQ--------------------- 62
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYA
Sbjct: 63 ---DKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYA 119
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG------AFRCYLDVGL 577
AAY+TG V + G F+ LDVGL
Sbjct: 120 AAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGL 179
Query: 578 ARTTTGARVFGAMKGAVDGGLNVPH 652
ARTTTGARVFG +KGAVDGG+ VPH
Sbjct: 180 ARTTTGARVFGVLKGAVDGGMAVPH 204
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 161 bits (392), Expect = 1e-38
Identities = 93/202 (46%), Positives = 111/202 (54%), Gaps = 3/202 (1%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++Q
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL RYG+ VGL NYA
Sbjct: 40 ---DKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYA 96
Query: 416 AAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLART 586
AAY+TG E + + + +LDVG+ RT
Sbjct: 97 AAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRT 156
Query: 587 TTGARVFGAMKGAVDGGLNVPH 652
TTG RVF A+KGA DGGLN+PH
Sbjct: 157 TTGNRVFAALKGACDGGLNIPH 178
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 156 bits (378), Expect = 5e-37
Identities = 88/199 (44%), Positives = 113/199 (56%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQ
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYA
Sbjct: 40 ---DKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY+TG + N++ P F LD+GL R+T G
Sbjct: 97 AAYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLG 151
Query: 596 ARVFGAMKGAVDGGLNVPH 652
RVF A+KGA DGG+++PH
Sbjct: 152 NRVFAALKGAADGGIHIPH 170
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 142 bits (345), Expect = 5e-33
Identities = 83/195 (42%), Positives = 104/195 (53%)
Frame = +2
Query: 68 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSVAHWD 247
K+VKN YF R+Q KF+RRRE KTDY R +L+ Q D
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQ------------------------D 39
Query: 248 KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYS 427
K KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AAY+
Sbjct: 40 KTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYA 99
Query: 428 TGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVF 607
TG EY + + P F+ LDVGLARTTTGA+VF
Sbjct: 100 TG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAKVF 154
Query: 608 GAMKGAVDGGLNVPH 652
MKGAVDGGL +PH
Sbjct: 155 AVMKGAVDGGLFIPH 169
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 135 bits (326), Expect = 1e-30
Identities = 71/182 (39%), Positives = 97/182 (53%)
Frame = +2
Query: 107 VKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSVAHWDKNKYNTPKYRLIV 286
++ K+ +G TDYYARKRL++Q DK+KYNTPKYRL+
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQ------------------------DKDKYNTPKYRLVA 342
Query: 287 RLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXX 466
R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YAAAY+TG
Sbjct: 343 RATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQI 402
Query: 467 XXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 646
+NV+ F+ LD GL RTTTG RVFG +KGA DGG+N+
Sbjct: 403 GLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINI 462
Query: 647 PH 652
PH
Sbjct: 463 PH 464
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 148
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 120 bits (289), Expect = 3e-26
Identities = 73/191 (38%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Frame = +2
Query: 83 KQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSVAHWDKNKYN 262
+ Y K +QVK +RRREGKTDY R ++ Q D N
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQ------------------------DSNSCG 39
Query: 263 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXX 442
+ K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 40 SVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAAYATGFLI 99
Query: 443 XXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 619
Y+V + +D A R +LD+GLAR+T GARVFGA+K
Sbjct: 100 GRRALTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALK 157
Query: 620 GAVDGGLNVPH 652
GA D GLNVPH
Sbjct: 158 GASDAGLNVPH 168
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 105 bits (252), Expect = 9e-22
Identities = 56/121 (46%), Positives = 67/121 (55%)
Frame = +2
Query: 290 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 469
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 470 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 649
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 650 H 652
H
Sbjct: 124 H 124
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 45.6 bits (103), Expect(3) = 4e-16
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 269 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 433
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 44.0 bits (99), Expect(3) = 4e-16
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 545 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 652
G LDVGL + G+RVF A+KGA+D G+ +PH
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPH 133
Score = 37.5 bits (83), Expect(3) = 4e-16
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 98 RYQVKFKRRREGKTDYYARKRLV 166
RY+V +RRREGKT+YY R RLV
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV 28
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 65.3 bits (152), Expect(2) = 3e-14
Identities = 45/126 (35%), Positives = 63/126 (50%)
Frame = +2
Query: 275 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXX 454
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTGML----- 88
Query: 455 XXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 634
+ V+ ++ G G LD+GLAR GARVF A+KGAVD
Sbjct: 89 --------------------FAVKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDA 126
Query: 635 GLNVPH 652
GL+VP+
Sbjct: 127 GLDVPY 132
Score = 35.5 bits (78), Expect(2) = 3e-14
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 98 RYQVKFKRRREGKTDYYARKRLV 166
RY V F+RR EGKTDYY R L+
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL 28
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 76.6 bits (180), Expect = 5e-13
Identities = 45/96 (46%), Positives = 54/96 (56%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ Q KN
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKN------------------ 53
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 343
KYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 54 ------KYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 278 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 433
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 572 GLARTTTGARVFGAMKGAVDGGLNVPH 652
GLARTTTG +VFGA+K VD GL++PH
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPH 97
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.1 bits (92), Expect(3) = 3e-12
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 545 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 652
G LD+GL T G++VF +GA+D GL++PH
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPH 132
Score = 39.5 bits (88), Expect(3) = 3e-12
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 269 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 433
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 33.1 bits (72), Expect(3) = 3e-12
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 98 RYQVKFKRRREGKTDYYARKRLV 166
RY+V +RRRE +TDY+ R RL+
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL 28
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 73.3 bits (172), Expect = 5e-12
Identities = 54/191 (28%), Positives = 83/191 (43%)
Frame = +2
Query: 80 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSVAHWDKNKY 259
N Y R+++K +RRR GKTDY R +L+ Q DK K+
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQ------------------------DKKKF 44
Query: 260 NTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXX 439
K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +Y G
Sbjct: 45 ENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLGYY 104
Query: 440 XXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 619
YN + N +D+GL R T G + F +MK
Sbjct: 105 FGKDLIEKVKQSET-----------YNKK---NYSSKITAIIDIGLKRATIGNKSFASMK 150
Query: 620 GAVDGGLNVPH 652
G+VD G+N+PH
Sbjct: 151 GSVDSGINIPH 161
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 46.4 bits (105), Expect(3) = 6e-10
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +2
Query: 545 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 652
G LDVGLA T+G RVF A++G VD GL++PH
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPH 135
Score = 31.1 bits (67), Expect(3) = 6e-10
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 95 KRYQVKFKRRREGKTDYYARKRLV 166
K +++FKRRR G+TDY R R++
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML 28
Score = 28.3 bits (60), Expect(3) = 6e-10
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 275 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 433
R +VR+SN TCQ+ GD ++ + L R+G + + A+Y TG
Sbjct: 34 RAVVRVSNTQTTCQLINYDSTGDEVIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 37.9 bits (84), Expect = 0.21
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 563 LDVGLARTTTGARVFGAMKGAVDGGLNVP 649
LD+GL ++ G+RV+ A+KG VD G +P
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIP 131
Score = 37.1 bits (82), Expect(2) = 8e-06
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 275 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 433
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 35.1 bits (77), Expect(2) = 8e-06
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +2
Query: 98 RYQVKFKRRREGKTDYYARKRLVV 169
RY+V F+RRREG+T+Y+ R +L++
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLL 29
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 512 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 652
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPH 88
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 36.3 bits (80), Expect = 0.64
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 563 LDVGLARTTTGARVFGAMKGAVDGGLNVPH 652
LD+G+ + G +++ +KGA+D GL +PH
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPH 132
Score = 35.5 bits (78), Expect(2) = 6e-04
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 101 YQVKFKRRREGKTDYYARKRLV 166
Y+V+FKRRREGKT+Y R +LV
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLV 28
Score = 30.3 bits (65), Expect(2) = 6e-04
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 269 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 433
K R++VR+++ Q+ GD + +A S L +G N +AAY TG
Sbjct: 32 KTRMVVRITSNHTITQLVKIGENGDETLVSATSKNLKEFGWLGNGKNTSAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 32.7 bits (71), Expect(2) = 0.004
Identities = 31/126 (24%), Positives = 56/126 (44%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
M + K++KN YF ++ VK +R R+ T Y YD +
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKS-----------YD---------SRFLK 40
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
++ +K+K K+R +N +++ + +S + GD IV A S +L ++G+ N
Sbjct: 41 SYTNKSK----KFRSYFTTTNTNLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLI 96
Query: 416 AAYSTG 433
+Y G
Sbjct: 97 NSYFIG 102
Score = 30.3 bits (65), Expect(2) = 0.004
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 551 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 649
F +D+G R R+ +KG +DGG+ +P
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIP 153
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 41.1 bits (92), Expect = 0.023
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +2
Query: 104 QVKFKRRREGKTDYYARKRLVVQLKN 181
+++F+R +EGKTDYYARKRL +Q KN
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKN 61
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 35.9 bits (79), Expect(2) = 0.10
Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 1/127 (0%)
Frame = +2
Query: 275 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXX 451
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVGYIA--- 84
Query: 452 XXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVD 631
+E NG + LD G + G R+ +KG D
Sbjct: 85 ----------------------GIESEKNGVES--AVLDTGRRKFRKGGRIAACLKGFTD 120
Query: 632 GGLNVPH 652
G+ VPH
Sbjct: 121 AGIEVPH 127
Score = 22.2 bits (45), Expect(2) = 0.10
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 113 FKRRREGKTDYYARKRLV 166
FKR+ G TDY R +L+
Sbjct: 6 FKRKEAGITDYSKRLKLL 23
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 30.7 bits (66), Expect(2) = 1.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 284 VRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 433
V +SN++ Q+ +++GD ++ + +S L G K + A+Y TG
Sbjct: 33 VHISNENAQVQIHAPKMDGDVVIASGHSRYLASKGWKGSRKSIPASYLTG 82
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 545 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 649
GA + G R T R+ A+KG D G++VP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVP 125
>UniRef50_Q0PAV1 Cluster: Putative uncharacterized protein; n=3;
Campylobacter jejuni|Rep: Putative uncharacterized
protein - Campylobacter jejuni
Length = 488
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 215 NVGQLSVAHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 352
N+ Q + + DKN NT K +L+ + +++T ++ +HI+
Sbjct: 3 NICQFIIENIDKNSLNTKKIKLVFNMQEQEITTISKIFKVSSEHII 48
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,839,136
Number of Sequences: 1657284
Number of extensions: 12643614
Number of successful extensions: 31643
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 30418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31626
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -