Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f03f
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 248 2e-65
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 248 2e-65
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 248 2e-65
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 248 2e-65
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 248 2e-65
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 248 2e-65
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 246 7e-65
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 169 1e-41
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 2e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 46 2e-04
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 248 bits (606), Expect = 2e-65
Identities = 123/199 (61%), Positives = 139/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 157 NKVFGALKGAVDGGLSIPH 175
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 248 bits (606), Expect = 2e-65
Identities = 123/199 (61%), Positives = 139/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 157 NKVFGALKGAVDGGLSIPH 175
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 248 bits (606), Expect = 2e-65
Identities = 123/199 (61%), Positives = 139/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 157 NKVFGALKGAVDGGLSIPH 175
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 248 bits (606), Expect = 2e-65
Identities = 123/199 (61%), Positives = 139/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 157 NKVFGALKGAVDGGLSIPH 175
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 248 bits (606), Expect = 2e-65
Identities = 123/199 (61%), Positives = 139/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 157 NKVFGALKGAVDGGLSIPH 175
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 248 bits (606), Expect = 2e-65
Identities = 123/199 (61%), Positives = 139/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 46
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 47 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 164 NKVFGALKGAVDGGLSIPH 182
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 246 bits (601), Expect = 7e-65
Identities = 122/199 (61%), Positives = 138/199 (69%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 416 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 595
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 596 ARVFGAMKGAVDGGLNVPH 652
+VFGA+KGAVDGGL++PH
Sbjct: 157 NKVFGALKGAVDGGLSIPH 175
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 169 bits (410), Expect = 1e-41
Identities = 84/122 (68%), Positives = 95/122 (77%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQLKNILYD*ADG*KWNVGQLSV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+Q
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQ--------------------- 39
Query: 236 AHWDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 415
DKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 40 ---DKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 416 AA 421
AA
Sbjct: 97 AA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 2e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 278 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 457
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 458 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 637
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 638 LNVPH 652
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +2
Query: 584 TTTGARVFGAMKGAVDGGLNVPH 652
TTTG +VFGA+KGAVDGGL++PH
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPH 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,203,555
Number of Sequences: 237096
Number of extensions: 2011961
Number of successful extensions: 3681
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3672
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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