Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f02f
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0917 + 7238721-7239078,7239590-7239957 34 0.079
11_06_0216 - 21345865-21346152,21347153-21347297,21348311-213483... 31 0.56
11_03_0148 + 10762150-10762264,10762347-10762776,10764653-107647... 30 1.7
09_03_0035 - 11765108-11765376,11765909-11766005,11766505-117665... 30 1.7
03_06_0199 + 32310272-32311432 30 1.7
01_06_1086 - 34421837-34422311,34422426-34422612,34423162-344232... 30 1.7
12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475,503... 29 3.0
04_04_0676 - 27187778-27188316,27188441-27188530,27189249-271894... 29 3.0
02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 29 3.9
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 29 3.9
09_02_0096 - 4221935-4222231 28 5.2
07_01_0068 - 495582-497981 28 5.2
07_01_0040 + 325737-328181 28 5.2
02_05_0296 + 27639981-27640766 28 5.2
02_05_0177 + 26505956-26506202,26506838-26507247,26507448-265076... 28 5.2
12_01_0930 + 9235986-9236175,9237362-9237495 28 6.9
12_01_0501 + 3976156-3976292,3976364-3976949 28 6.9
03_05_0737 + 27258320-27259007,27259263-27259435,27262684-272627... 28 6.9
01_01_0652 + 4975091-4975585 28 6.9
12_02_0715 - 22453747-22453935,22454347-22454457,22454514-224545... 27 9.1
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153... 27 9.1
08_01_0161 + 1281704-1281958 27 9.1
06_03_1218 - 28488661-28488757,28488924-28488988,28489352-284894... 27 9.1
06_03_0232 - 18507872-18508792 27 9.1
04_04_1631 - 34919197-34919205,34919865-34920204,34920418-349207... 27 9.1
02_02_0558 + 11477433-11477525,11477632-11477973,11481854-114823... 27 9.1
>01_01_0917 + 7238721-7239078,7239590-7239957
Length = 241
Score = 34.3 bits (75), Expect = 0.079
Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +1
Query: 19 ERPRFFTHSTVLRAMHHNEQPTGNACN-GSTREGGLVWRGCSASCDAEDGTTGAFDDGNS 195
+RP +++ A H P AC S R L+ R C A G G ++ +S
Sbjct: 63 DRPTLQPDASLAAAFH----PCLPACTRSSARSSELIARCCCACGFGGVGQVGEYERCHS 118
Query: 196 NPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVG-TMIGSGIF--VSPLGFWRVP 351
PG LE D P P VG SG L G GS IF SPL + + P
Sbjct: 119 VPGGGLELGDTNP--PTRTLAMVGTSSGNGLSNGDDNYGSSIFSLKSPLAWTQPP 171
>11_06_0216 -
21345865-21346152,21347153-21347297,21348311-21348360,
21348564-21348938,21349717-21349842
Length = 327
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 124 VWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDDPVHLKRRV 264
VW G +A+ + G G + ++ GD++ +DAAP P +L RRV
Sbjct: 85 VW-GEAAASEGLGGGAGGWGSSSAYVGDEIRVNDAAPPLPSNLGRRV 130
>11_03_0148 +
10762150-10762264,10762347-10762776,10764653-10764735,
10764980-10765068,10765178-10765251,10765333-10765383,
10765687-10765763,10766237-10767012
Length = 564
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 128 GAGAQPAAMPKTARRERSTMATQTQETS-WRGRTQLRTTLFTSRDGWDSS 274
G GA AA A+R ++ M T Q TS +RG T+ R T WD+S
Sbjct: 148 GGGAAEAAAAAAAQRMKAAMDTFGQRTSIYRGVTKHRWTGRYEAHLWDNS 197
>09_03_0035 -
11765108-11765376,11765909-11766005,11766505-11766579,
11767367-11767650,11768466-11768562
Length = 273
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/81 (27%), Positives = 31/81 (38%)
Frame = +3
Query: 51 ASSNASQ*TADRECMQREHTRRRIGLARVLSQLRCRRRHDGSVRRWQLKPRRQAGGVGRS 230
A+S S D E +R+ T +A V + R RRR + + KP R G +S
Sbjct: 6 AASTWSTAIGDGEVRRRQATALARWIAGVSERERDRRRRAAAAAAREPKPERMVFGRSKS 65
Query: 231 SGRPCSPQETGGTLQWGGSNC 293
S SP + C
Sbjct: 66 SSSTASPPPAAAASSAAAAAC 86
>03_06_0199 + 32310272-32311432
Length = 386
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 84 RECMQREHTRRRIGLARVLSQLRCRRRHDGSVRRWQLKPRRQA--GGV 221
R+ + R +RR L RV +LR R H RRW L+ RR+A GGV
Sbjct: 137 RQGLLRRPRQRR--LLRVRGELRVRS-HQAGRRRWPLRRRRRARVGGV 181
>01_06_1086 -
34421837-34422311,34422426-34422612,34423162-34423291,
34423485-34423720,34423804-34423961,34424048-34424128,
34424216-34424281,34424364-34424432,34424722-34424866,
34425645-34426138,34426244-34426811,34429529-34429574
Length = 884
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 231 SGRPCSPQETGGTLQWGGSNCRHYDWIRNIRI 326
+G PCSP+E W G C +YD +N RI
Sbjct: 388 NGDPCSPKE----YTWEGVKCNYYDGKQNPRI 415
>12_01_0611 -
5034481-5034709,5034863-5035020,5035231-5035475,
5036686-5036983,5037644-5038482,5039763-5039823
Length = 609
Score = 29.1 bits (62), Expect = 3.0
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Frame = +1
Query: 40 HSTVLRAMHHNEQPTGNACNGST--REGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKL 213
H V + + Q +C T +EGGL GC D +G + DD + + D L
Sbjct: 102 HGVVTAPLANGWQWGARSCPPGTESKEGGLPLSGCDPETDNAEGYDTSDDDNDDDMSDDL 161
Query: 214 E---GSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPLGFWRVPA 354
SDA+ + ++ LF G ++ + + P W PA
Sbjct: 162 SDDYDSDAS-EKSFETRKNHKLFKGFFEVLEALSVEQL-NEPTRQWHCPA 209
>04_04_0676 -
27187778-27188316,27188441-27188530,27189249-27189480,
27189569-27189899,27190369-27190591,27190772-27191132
Length = 591
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 214 EGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVS 327
E S+ +KRR+ + V L VG M+G+G+FV+
Sbjct: 31 ETSEVRDRSGARMKRRLEWYDLVGLGVGGMLGAGVFVT 68
>02_05_1057 +
33809982-33810366,33810436-33810687,33810727-33810926,
33811021-33811122
Length = 312
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 82 TGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPG 204
TG+AC+ T EG GC C E+ TG G G
Sbjct: 57 TGDACSPGTAEG-----GCGGGCGGENDDTGNGGGGGGGGG 92
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +1
Query: 154 AEDGTTGAFDDGNSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPL 333
A DG G G +GSDA D+ L R+G +G A T +G+G V+P
Sbjct: 691 ARDGDGGGAPGDGERGGVDGDGSDATGDEKAAL--RMGTGTGTA---ATRLGTGTAVAPT 745
Query: 334 GFWRVP 351
+ P
Sbjct: 746 WLGQAP 751
>09_02_0096 - 4221935-4222231
Length = 98
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 268 LFSGVALIVGTMIGSGIFVSP-LGFWRV 348
L V IVG I G+F+SP L FWR+
Sbjct: 6 LIRNVVGIVGNAISFGLFLSPVLTFWRI 33
>07_01_0068 - 495582-497981
Length = 799
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 211 ACLLGLSCHRRTLPSCRLRHRSWLSTRAKPIRLR 110
A +L L C R + +H +WLS A+ +RL+
Sbjct: 356 AAILMLLCSNRMIVFLEAKHMAWLSRVARAVRLQ 389
>07_01_0040 + 325737-328181
Length = 814
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 211 ACLLGLSCHRRTLPSCRLRHRSWLSTRAKPIRLR 110
A +L L C R + +H +WLS A+ +RL+
Sbjct: 386 AAILMLLCSNRMIVFLEAKHMAWLSRVARAVRLQ 419
>02_05_0296 + 27639981-27640766
Length = 261
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 228 SSGRPCSPQETGGTLQWGGSNCRHYDWIRNIRIP 329
SSG P SP+ +G + G CR W+ IR P
Sbjct: 56 SSGEP-SPRSSGKHAFYRGIRCRSGKWVSEIREP 88
>02_05_0177 +
26505956-26506202,26506838-26507247,26507448-26507624,
26507775-26507999,26508089-26508265,26508357-26508593,
26508855-26508944,26509102-26509254
Length = 571
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 250 LKRRVGLFSGVALIVGTMIGSGIFV 324
L R++G+F V L +G IG+GIFV
Sbjct: 47 LVRQLGVFELVLLGIGASIGAGIFV 71
>12_01_0930 + 9235986-9236175,9237362-9237495
Length = 107
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 136 CSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGT 300
CS + G G DD G K+ + PD P+ + F V L+ T
Sbjct: 27 CSGGLTTKQGERGQHDDRGGRHGTKMADEELGPDLPIAATKDDCYFPHVRLMRDT 81
>12_01_0501 + 3976156-3976292,3976364-3976949
Length = 240
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 268 LFSGVALIVGTMIGSGIFVSPLG-FWRV 348
L V IVG +I G+F+SP+ FWR+
Sbjct: 6 LIRNVVGIVGNVISFGLFLSPVPIFWRI 33
>03_05_0737 +
27258320-27259007,27259263-27259435,27262684-27262758,
27262832-27263296
Length = 466
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 229 LRPTPPACLLGLSCHRRTLPSCRLRHRSWLSTRAKPI 119
L + PA +G+S HR L SC R WL +PI
Sbjct: 187 LAASRPAAAVGVS-HRDALQSCAQHARLWLRRADEPI 222
>01_01_0652 + 4975091-4975585
Length = 164
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = +1
Query: 151 DAEDGTTGAFDDGNSNPGDKLEGSDAAPDD------PVHLKRRVGLFSG 279
D +DG DD + + GD + D APDD H RRV L G
Sbjct: 86 DDDDGGPDDLDDDDPDNGDLGDDDDGAPDDDDGGLGTGHWGRRVALAEG 134
>12_02_0715 - 22453747-22453935,22454347-22454457,22454514-22454572,
22454893-22455067,22455255-22455307,22455670-22455739,
22457044-22457218,22457639-22457703,22458196-22460826
Length = 1175
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 194 QTQETSWRGRTQLRTTLFTSRDGWDSSVGWL*LSAL*LDQEYSY 325
+T E WR R + F DG DSS+ L + D +YSY
Sbjct: 1038 ETYERDWRPGLNFRFSRFDRSDGNDSSIREL-TGQMLQDMKYSY 1080
>08_01_0181 +
1530623-1531626,1531723-1531902,1531998-1532177,
1532363-1532442,1532528-1532701,1533001-1533118,
1533223-1533301
Length = 604
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 475 MK*AYSAPDDVFIVPNS-AYASAPSNESRPHAIQMMKLMPTEPVRAKSPEGIRIFLI 308
M + ++PD + IV NS A + N H ++L+P P A +P G I I
Sbjct: 547 MNPSLASPDPLEIVSNSQAPPTQAGNIYDDHESNQIELLPESPFAASAPAGNSISTI 603
>08_01_0161 + 1281704-1281958
Length = 84
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 55 RAMHHNEQPTGNACNGSTREGGLVWRGCSASCDAEDGTTGA 177
+A+ G C G + GG R CSA DA DG A
Sbjct: 23 QAVRRERDDVGGRCGGCS--GGAALRPCSAVRDAADGYCAA 61
>06_03_1218 -
28488661-28488757,28488924-28488988,28489352-28489448,
28489647-28489852,28489853-28490152
Length = 254
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 276 WGGSNCRHYDWIRNIRIPSGLLARTGSVGIS 368
W G NCR + +R+I +PS LA + S +S
Sbjct: 12 WEGINCRGENTVRDISLPSKGLAGSISPSLS 42
>06_03_0232 - 18507872-18508792
Length = 306
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -1
Query: 619 LSGGSHSATKGSTAYLAKLRQIMAICDGFKTNVDTHEKRNAGGPPKASMK*AYSAPDDVF 440
LS + ++ S+ L+ I +C V E+R +AS + + + D+V+
Sbjct: 164 LSSSASPSSSSSSPIKKALQAIFCMCAKTAKKVKKIERRQKEDRREASKEVSDDSEDEVY 223
Query: 439 IVPNSAYASA 410
+ P AY +A
Sbjct: 224 VDPLEAYEAA 233
>04_04_1631 -
34919197-34919205,34919865-34920204,34920418-34920726,
34920781-34921307,34921700-34921852,34922102-34922186,
34922360-34922364
Length = 475
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 KPRRQAGGVGRSSGRPCSPQETGGTLQWGGSNCRHYD-WI 311
KP ++ VG G+ ETGG ++W G R + W+
Sbjct: 265 KPEKKGEWVGNKKGKD-DKNETGGKIKWNGKCFRCQEPWV 303
>02_02_0558 +
11477433-11477525,11477632-11477973,11481854-11482381,
11482459-11482956
Length = 486
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -1
Query: 613 GGSHSATKGSTAYLAKLRQIMAICDGFKTNVDTHEKRNAGGPPKASMK*AYSAPDDVFIV 434
G H+A +LA +R++ F+ + D +K+ GG + A +AP+ + +
Sbjct: 2 GKKHAAAGSGGGWLAAVRKV------FRPSKDAADKKGGGGGDREEEAAAEAAPEVLLLE 55
Query: 433 PNSAYASAPSNE 398
A ++PS E
Sbjct: 56 HFPAGGTSPSAE 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,055,892
Number of Sequences: 37544
Number of extensions: 542371
Number of successful extensions: 1901
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1901
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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