Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f02f
(622 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07) 95 4e-20
SB_24307| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 5e-20
SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_47706| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15
SB_51333| Best HMM Match : Yip1 (HMM E-Value=2.7) 68 5e-12
SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22) 38 0.009
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 38 0.009
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_52606| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 31 1.00
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 30 1.3
SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035) 30 1.7
SB_34168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_26505| Best HMM Match : DUF1299 (HMM E-Value=0.78) 29 2.3
SB_53813| Best HMM Match : RA (HMM E-Value=1.1) 29 2.3
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 29 2.3
SB_22151| Best HMM Match : MORN (HMM E-Value=6) 29 2.3
SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13) 29 3.0
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 29 3.0
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 29 3.0
SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_18414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_18409| Best HMM Match : DM (HMM E-Value=5.9) 28 5.3
SB_24802| Best HMM Match : Phage_fiber_C (HMM E-Value=1.1) 28 7.0
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_56759| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 99.5 bits (237), Expect = 2e-21
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P G+L +TGSVG+S ++W C TM SGAEY+Y DAFG PAFL
Sbjct: 61 PKGVLQQTGSVGLSLVVWAGCGLLALFGSLCYCEMGTMIPKSGAEYSYLKDAFGPLPAFL 120
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECE 608
+SW L+++PS +AI+ L+FA+Y +PF CE
Sbjct: 121 YSWTLALIIRPSSLAIVSLTFARYVTQPFFPNCE 154
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +1
Query: 214 EGSDAAPDD--PVHLKRRVGLFSGVALIVGTMIGSGIFVSPLG 336
E D P + +HLK+ V L +GVAL+VG MIGSGIF+SP G
Sbjct: 21 ENGDIPPVEIKEIHLKKEVSLINGVALVVGVMIGSGIFISPKG 63
>SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07)
Length = 530
Score = 95.1 bits (226), Expect = 4e-20
Identities = 39/96 (40%), Positives = 57/96 (59%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+G+ GS+G++ +IW+ C + T SGAEYAY M+AFG PA+L
Sbjct: 127 PTGIQKEAGSIGLALLIWLGCGILAMLGCLCYAELGALVTKSGAEYAYLMEAFGRIPAYL 186
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECEPP 614
F+W S L+++P+ AII L F +Y +PF +C PP
Sbjct: 187 FAWTSILIIRPASGAIIALIFGEYVAKPFFPDCPPP 222
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 181 DDGNSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPLG 336
D+G+S+ GS + + LK+ + + +G+ +I GT+IGSGIF+SP G
Sbjct: 82 DEGSSSSS----GSTDSERGKITLKKNITMVNGIGIIAGTVIGSGIFISPTG 129
>SB_24307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 94.7 bits (225), Expect = 5e-20
Identities = 41/93 (44%), Positives = 54/93 (58%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P ++ GSVG++ I+W C TM SGAEY Y +AFG P FL
Sbjct: 73 PRYVMENCGSVGLTLIVWGLCGLLAISGALCYSELGTMIPRSGAEYTYLYEAFGPLPGFL 132
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAEC 605
++W ST++LKPSQ+AIICL+F Y +EPF C
Sbjct: 133 YAWTSTIILKPSQVAIICLAFGAYVIEPFFPAC 165
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P ++ +GS+G + ++W+ C SGAEYAY + FG +FL
Sbjct: 295 PRWVMMFSGSLGFTLVVWVLCGLLSLLGALCYIELGLAVPKSGAEYAYLGEGFGALASFL 354
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAEC-EPPD 617
FSW LV +P+ AII L+FA Y +EP C E PD
Sbjct: 355 FSWTQVLVYRPASFAIILLTFAYYVMEPIFPGCLERPD 392
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 190 NSNPGDKLEGSDAAPDDPVH--LKRRVGLFSGVALIVGTMIGSGIFVSP 330
N D L S PV L+RRVGL SG++LIVGTMIGSGIF SP
Sbjct: 25 NDRTTDNLLASSEIEGSPVFIGLQRRVGLTSGISLIVGTMIGSGIFASP 73
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1
Query: 244 VHLKRRVGLFSGVALIVGTMIGSGIFVSP 330
V+LK+ VG+ SG+++IVGTMIGSGIF SP
Sbjct: 267 VNLKKEVGVVSGMSIIVGTMIGSGIFASP 295
>SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/96 (41%), Positives = 55/96 (57%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+G+L T S+G+S ++W C T SGAEYAY M+AFG PAFL
Sbjct: 64 PTGILGTTQSIGLSLMVWFGCGFLALLACLCYTELGTAVQKSGAEYAYLMEAFGPIPAFL 123
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECEPP 614
F+W ++ +P+ AI+ L FA+Y +PF EC PP
Sbjct: 124 FAWTGIIINRPAITAIVSLIFAEYVAKPFFPECAPP 159
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +1
Query: 244 VHLKRRVGLFSGVALIVGTMIGSGIFVSPLG 336
V L++RV L SG++ IVGT+IGSGIF+SP G
Sbjct: 36 VGLEKRVTLLSGISFIVGTVIGSGIFISPTG 66
>SB_24308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/92 (46%), Positives = 52/92 (56%)
Frame = +3
Query: 330 SGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLF 509
SG+ TGS G+ +W C TM SGAEYAY AFG AFLF
Sbjct: 269 SGVFMYTGSAGLGIAVWALCGVIAMMGSLCYAELGTMIVKSGAEYAYLNAAFGERVAFLF 328
Query: 510 SWVSTLVLKPSQMAIICLSFAKYAVEPFVAEC 605
SW ST++LKPSQ+AI+ L+F +Y VEPF C
Sbjct: 329 SWTSTILLKPSQIAIVSLAFGQYVVEPFFPTC 360
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/90 (38%), Positives = 46/90 (51%)
Frame = +3
Query: 336 LLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFLFSW 515
++ +GSVG + ++W C SG E YF AFG PAFL+SW
Sbjct: 67 VMVYSGSVGFTLVVWSLCGLLCSFGALSYIELGLAIPKSGGERTYFKAAFGELPAFLYSW 126
Query: 516 VSTLVLKPSQMAIICLSFAKYAVEPFVAEC 605
LV+KPS +A+I L+FA Y VE F C
Sbjct: 127 TVMLVIKPSALALILLTFATYLVEAFFPGC 156
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = +1
Query: 190 NSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPLG 336
N+N G+ L A P L+ VGL G++LIVGTMIGSGIF S G
Sbjct: 226 NNNMGEGL----ATSGSPATLRPEVGLLGGISLIVGTMIGSGIFASASG 270
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 241 PVHLKRRVGLFSGVALIVGTMIGSGIFVS 327
P L+R++G G+++IVG+MIGSGIF S
Sbjct: 35 PARLERKIGFVGGISIIVGSMIGSGIFAS 63
>SB_47706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 82.2 bits (194), Expect = 3e-16
Identities = 41/95 (43%), Positives = 50/95 (52%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P +L TGSVG+ + W C T+ SG E YF +AFG PAFL
Sbjct: 38 PKFVLENTGSVGMMVVAWALCGLVATLGSLCYCELGTLIQKSGGELVYFREAFGSLPAFL 97
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECEP 611
SW LVLKPS +AII ++FA YA PF+A P
Sbjct: 98 VSWTIILVLKPSSIAIISMAFASYAYLPFMAPGTP 132
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 262 VGLFSGVALIVGTMIGSGIFVSP 330
+ L GVA+I+G MIGSGIFVSP
Sbjct: 16 ITLLQGVAIIIGIMIGSGIFVSP 38
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 77.8 bits (183), Expect = 7e-15
Identities = 37/93 (39%), Positives = 48/93 (51%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P +L TGSVG+S ++W C M G EYAY M AFG AFL
Sbjct: 832 PRWVLLYTGSVGLSLLVWALCGMIALFGSLSYVELALMIPRCGGEYAYLMQAFGPFAAFL 891
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAEC 605
+SW+S LKP+ + +I L+F Y +EPF C
Sbjct: 892 YSWISVCFLKPATV-LILLAFGAYVIEPFFPHC 923
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +1
Query: 205 DKLEGSDAAP----DDPVHLKRRVGLFSGVALIVGTMIGSGIFVSP 330
+ L+ +A P D+ + L+R VGL VA +VGT+IGSGIF +P
Sbjct: 787 EPLQDENACPKQTQDEYIGLRRNVGLSGAVAFLVGTIIGSGIFATP 832
>SB_51333| Best HMM Match : Yip1 (HMM E-Value=2.7)
Length = 171
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/93 (34%), Positives = 46/93 (49%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P ++ +GSVG+S ++W M SG EY Y ++AFG PAFL
Sbjct: 60 PKWVMVYSGSVGLSLVVWCLGGLISLFGSLCYIELGLMIPVSGGEYEYLLEAFGPLPAFL 119
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAEC 605
F+W+ +L +K + I+ L F Y EPF C
Sbjct: 120 FAWLYSLFIKNMGIVILLLVFGAYVTEPFYPGC 152
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Frame = +1
Query: 181 DDGNSNPGDKLEGSDAAPDDPVH------LKRRVGLFSGVALIVGTMIGSGIFVSP 330
+D N N + + D APD+ ++ LKR +G+ +GV+L+VG +IGSGIF +P
Sbjct: 6 EDPNENVTLRAD-EDGAPDESLNVEPSVTLKRPLGVPTGVSLLVGIIIGSGIFATP 60
>SB_35680| Best HMM Match : Sushi (HMM E-Value=4.4e-22)
Length = 442
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 127 WRGCSASCDAEDGTTGAFDDGNSNPGD-KLEGSDAAPDDPVH 249
W G +ASC DG DDG+ + GD +G+D DD H
Sbjct: 94 WTGSTASCTGNDGHEDGHDDGDGDDGDADGDGNDHGDDDGFH 135
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 127 WRGCSASCDAEDGTTGAFDDGNSNPGD-KLEGSDAAPDDPVH 249
W G +ASC DG DDG+ + GD +G+D DD H
Sbjct: 1607 WTGSTASCTGNDGHEDGHDDGDGDDGDADGDGNDHGDDDGFH 1648
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 79 PTGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPD 237
P G+ C+ GG GC A CD+ D G + G +G DA D
Sbjct: 56 PDGDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDAGCD 108
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 79 PTGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDD 240
P G+ C+ GG GC A CD+ D G + G +G D+ D
Sbjct: 4 PDGDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDSGGPD 57
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 79 PTGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPD 237
P G+ C+ GG GC A CD+ G G DG + G +G DA D
Sbjct: 18 PDGDGCDAGCDSGGPDGDGCDAGCDS-GGPDG---DGCDSGGPDGDGCDAGCD 66
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 79 PTGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPD 237
P G+ C+ +G GC A CD+ D G + G +G DA D
Sbjct: 46 PDGDGCDSGGPDGD----GCDAGCDSGGPDGDGCDAGCDSGGPDGDGCDAGCD 94
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 79 PTGNACNGSTREGGLVWRGCSASCDA-EDG 165
P G+ C+ GG GC A CD+ E+G
Sbjct: 84 PDGDGCDAGCDSGGPDGDGCDAGCDSGENG 113
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 190 NSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVS 327
+ P ++ + + L+R +GL + ++L G M+GSGIF+S
Sbjct: 240 SGEPVASVDAGNGKKSEEFGLRRDLGLCASISLSGGAMVGSGIFIS 285
>SB_52606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 250 LKRRVGLFSGVALIVGTMIGSGIFVS 327
L+R +GL + ++L G M+GSGIF+S
Sbjct: 25 LRRDLGLCASISLSGGVMVGSGIFIS 50
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Frame = +3
Query: 216 GVGRSSGRPCSPQETGGTLQWGGSNCRHYDWIRNIRIPSGL-------LARTGSVGISFI 374
G G +G+ P+E G G C + + SG+ L +GSVG+S +
Sbjct: 9 GTGGDAGKAKKPEEFGLRRDLG--LCASISLSGGVMVGSGIFISAQWVLVYSGSVGMSLL 66
Query: 375 IWMAC 389
IW+ C
Sbjct: 67 IWLLC 71
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 30.7 bits (66), Expect = 1.00
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = +1
Query: 52 LRAMHHNEQPTGNACNGSTREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEG 219
LR NE P +CN T +GG S +CD E G DDG S G++ EG
Sbjct: 1163 LREELDNEHPV-ISCN--TEQGGPQEAQDSRACDGEHSDDGEADDG-SESGEESEG 1214
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 93 MQREHTRRRIGLARVLSQLRCRRRHDGSVRRWQ----LKPRRQAGGVGRSSGR 239
++R RRR L R+ + R RRR +RR + L+ RR+ GG R GR
Sbjct: 365 LRRRRNRRRRRLRRIRRRRRRRRRRRRKLRRRRRRRPLRRRRRRGGRRRRRGR 417
>SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035)
Length = 624
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Frame = +1
Query: 133 GCSASCDAEDGTTGAFDDGNSNPG--DKLEGSDAAPDD----PVHLKRRVGLFSGVALIV 294
GC CD ++G G DDG+ G +G D D V + V VA++V
Sbjct: 375 GCDDGCDGDEGDGGGDDDGDGGDGGCSNDDGGDDEGDSGDAVMVVVMMMVMAVMVVAMVV 434
Query: 295 GTMI-GSGIFVSPL 333
M+ G G+ V L
Sbjct: 435 VVMVDGDGMVVMTL 448
>SB_34168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 178 TLPSCRLRHRSWLSTRAKPIRLRVCS 101
T CR+R R +L T P+R+R+CS
Sbjct: 411 TRAPCRVRIRLFLVTTTPPLRVRICS 436
>SB_26505| Best HMM Match : DUF1299 (HMM E-Value=0.78)
Length = 535
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 65 ITMNSRQGMHATGAHAKADWFGAGAQPAAMPKTARRERSTMATQTQETSW 214
+T+N R+G +++ +G +PA MP+ +RR +T++ + W
Sbjct: 382 MTLNMRKGGSYAVGRSQSFAGESGHKPATMPRLSRRATTTLSNRKANDLW 431
>SB_53813| Best HMM Match : RA (HMM E-Value=1.1)
Length = 553
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 178 TLPSCRLRHRSWLSTRAKPIRLRVCS 101
T CR+R R +L T P+R+R+CS
Sbjct: 510 TRAPCRVRIRLFLVTTTPPLRVRICS 535
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 65 ITMNSRQGMHATGAHAKADWFGAGAQPA-AMPKTARRERSTMAT 193
+ S G H T +H+ + + GA +QPA ++ AR S+ T
Sbjct: 415 VANRSLSGTHGTSSHSSSSFHGASSQPAGSLSVNARSSSSSHVT 458
>SB_22151| Best HMM Match : MORN (HMM E-Value=6)
Length = 186
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 96 QREHTRRR-IGLARVLSQLRCRRRHDGSVRRWQLKPRRQAGGVGRSSG--RPCSPQETGG 266
+RE RRR + R + + R R RR +++ RR+ GVGR SG R + G
Sbjct: 46 RREMERRREMERRREMERRREMERRREMERRREMERRRERSGVGRWSGGERWSGVERWSG 105
Query: 267 TLQWGG 284
+W G
Sbjct: 106 GERWSG 111
>SB_44981| Best HMM Match : AA_permease (HMM E-Value=9.6e-13)
Length = 446
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 214 EGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFV 324
+G D P D L+R + F +L VGT++G+G++V
Sbjct: 15 KGQDFGPSDSP-LRRCLNTFDLTSLGVGTVVGAGLYV 50
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 214 EGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFV 324
+G D P D L+R + F +L VGT++G+G++V
Sbjct: 297 KGQDFGPSDSP-LRRCLNTFDLTSLGVGTVVGAGLYV 332
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 106 TREGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDDPVHLKRRVGL 270
+++ G+ A D+E+GT G + G+K+ S ++ D H KR++ L
Sbjct: 283 SQDSGVAEAESPAEQDSEEGTPGMSPPVDETDGNKVHRSTSSISDDGHKKRKLQL 337
>SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 112 EGGLVWRGCSASCDAEDGTTGAFDDGNSNPGDKLEGSDAAPDD 240
+GG GC +S D ++ + DDG + D +G D DD
Sbjct: 77 DGGCGGGGCGSSSDGDNDDSNDVDDGGGDGDDDNDG-DGVDDD 118
>SB_18414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 126 LARVLSQLRCRRRHDGSVRRWQLKPRRQAGGVGRSSGRPCSPQETGGTLQWGGSNC 293
+ V+S R RRR D R R+ AG G G+P +E +W NC
Sbjct: 177 MVAVMSMTRIRRRADVGSRNCT---RKTAGQKGTVRGKPLVKKELYAEDRWSKRNC 229
>SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 154 AEDGTTGAFDDGNSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGI 318
AE G A D SNP + + DAA D +H+ + + I+ M+G G+
Sbjct: 161 AEKGERTADQDEQSNPLPEQQTDDAA-SDAIHVTLTTSVALSLYFIITIMMGVGL 214
>SB_18409| Best HMM Match : DM (HMM E-Value=5.9)
Length = 190
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 208 CLLGLSCHRRTLPSCRLRHRSWLSTRAK--PIRLRVCSRCMHSLSA 77
C+ + RT+ CR H +W+S A+ + +R RC ++ SA
Sbjct: 112 CIQCVDVVMRTVRGCRYAHSAWMSLCAQCVGVVIRTVRRCRYAHSA 157
>SB_24802| Best HMM Match : Phage_fiber_C (HMM E-Value=1.1)
Length = 1072
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 247 EQGRPELRPTPPACLLGLS-CHRRTLPSCRLRHRSWL 140
E G L PA L G++ C RT+PS + SW+
Sbjct: 596 EGGAISLTNAQPAVLSGVTKCESRTVPSATASNHSWI 632
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 220 SDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPLGF 339
+ + P H +R + S + +V TMIG G+ P F
Sbjct: 216 NSSTPIKAEHHERHGTILSSIFTLVSTMIGGGVLSLPFAF 255
>SB_56759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 229 APDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPLGFWRV 348
AP + + + FS + +VG +IG + ++ GF+RV
Sbjct: 99 APAQRISVFGKFNAFSSLGFVVGPLIGGHLAMTDNGFFRV 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,022,101
Number of Sequences: 59808
Number of extensions: 557600
Number of successful extensions: 1689
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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