Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10f02f
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 82 3e-16
U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid tran... 80 1e-15
AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid tr... 80 1e-15
U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid tran... 59 3e-09
AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid tr... 53 1e-07
AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid tr... 52 4e-07
AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid tr... 52 4e-07
AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid tr... 52 4e-07
Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 31 0.88
AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical ... 29 2.0
AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical ... 29 2.0
Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical pr... 29 2.7
U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid tran... 29 2.7
AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity ... 29 2.7
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical pr... 28 6.2
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/97 (36%), Positives = 54/97 (55%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+G+ + GSVG+S I+W+ T+ SG +YAY M+AFG AF+
Sbjct: 54 PTGVQEQAGSVGLSLIVWLISGIFTAIGAYCYAELGTLIKKSGGDYAYIMEAFGPFVAFI 113
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECEPPD 617
W+ +V++P + I+ L+FA Y + PF +C PPD
Sbjct: 114 RLWIEAIVVRPCTVTIVALTFAIYGLRPFFPDCAPPD 150
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 184 DGNSNPGDKLEGSDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSPLG 336
+G+ P ++ EG L++ + LF+GV++IVG +IGSGIFVSP G
Sbjct: 12 EGDEAPQNETEGKGKG------LEKSLTLFNGVSMIVGCIIGSGIFVSPTG 56
>U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid
transporter protein 2 protein.
Length = 483
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/97 (37%), Positives = 55/97 (56%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P G+L GS G+S +IW+ T+ SG +YAY +AFG P+FL
Sbjct: 41 PKGVLLEAGSAGMSLLIWLLSGVFAMIGAVCYSELGTLIPKSGGDYAYIYEAFGPLPSFL 100
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECEPPD 617
F WV+ +++ P+ +AII ++ A YA++PF + C PD
Sbjct: 101 FLWVALVIINPTSLAIIAITCATYALQPFYS-CPVPD 136
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 244 VHLKRRVGLFSGVALIVGTMIGSGIFVSPLG 336
+ LK R+ LF+G +I+G +IGSGIFVSP G
Sbjct: 13 IKLKPRISLFNGCTIIIGVIIGSGIFVSPKG 43
>AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid
transporter protein 3 protein.
Length = 493
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/96 (36%), Positives = 55/96 (57%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+G+ A+ GSVG+S I+W+ T+ SG +YAY M+AFG AFL
Sbjct: 54 PTGIQAQAGSVGLSLIVWVLSGLFAGIGAFCYAELGTLIRKSGGDYAYIMEAFGPFLAFL 113
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVEPFVAECEPP 614
W+ ++V++P I+ L+FA Y ++PF +C+ P
Sbjct: 114 RLWIESIVVRPCTATIVALTFAIYMLKPFYPDCDSP 149
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/29 (58%), Positives = 25/29 (86%)
Frame = +1
Query: 250 LKRRVGLFSGVALIVGTMIGSGIFVSPLG 336
L++ + LF+GV++IVG +IGSGIF+SP G
Sbjct: 28 LEKTMTLFNGVSIIVGCIIGSGIFISPTG 56
>U70850-4|AAB09125.3| 483|Caenorhabditis elegans Amino acid
transporter protein 8 protein.
Length = 483
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPP-AF 503
P G++ GSVG+S IIW+ C T SGA+ AY +D G P AF
Sbjct: 31 PKGIVEHAGSVGLSLIIWVFCALLNMITAINYIELGTSIPESGADLAY-IDYMGWTPIAF 89
Query: 504 LFSWVSTLVLKPSQMAIICLSFAKY---AVEPFV 596
W+S L+ S A++ L+F KY A+EP V
Sbjct: 90 SLLWLSLLIQSSSSAAVLYLTFGKYLVQALEPIV 123
Score = 34.7 bits (76), Expect = 0.054
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 259 RVGLFSGVALIVGTMIGSGIFVSPLG 336
++GL + IVG++IGSGIF++P G
Sbjct: 8 KIGLIGATSYIVGSIIGSGIFIAPKG 33
>AF040647-7|AAB94996.2| 506|Caenorhabditis elegans Amino acid
transporter protein 7 protein.
Length = 506
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/86 (32%), Positives = 39/86 (45%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+ +L GSVG+S +W C T SG ++AY P A
Sbjct: 36 PTSILNHAGSVGLSLCLWALCACISLFGALSYVELGTSIRKSGCDFAYLSHFGWRPLASS 95
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAV 584
F WVST + P+ +AI +SF +Y V
Sbjct: 96 FMWVSTCLSYPAVLAIQAISFGEYIV 121
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 253 KRRVGLFSGVALIVGTMIGSGIFVSP 330
K +GL + ++ VG ++GSGIF+SP
Sbjct: 11 KHTIGLITAISYTVGDIVGSGIFISP 36
>AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid
transporter protein5, isoform c protein.
Length = 278
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+ +L S+G+S +IW+ C T +G ++AY AF
Sbjct: 29 PASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSIAFA 88
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVE 587
F WVS L+ P+ +AI +F +Y +E
Sbjct: 89 FMWVSVLMTYPATIAICAETFGQYLIE 115
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 RVGLFSGVALIVGTMIGSGIFVSPLGFWR 345
++G + ++G +IGSGIF++P R
Sbjct: 6 KMGFLGATSYVIGNIIGSGIFITPASILR 34
>AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid
transporter protein5, isoform b protein.
Length = 521
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+ +L S+G+S +IW+ C T +G ++AY AF
Sbjct: 29 PASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSIAFA 88
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVE 587
F WVS L+ P+ +AI +F +Y +E
Sbjct: 89 FMWVSVLMTYPATIAICAETFGQYLIE 115
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 RVGLFSGVALIVGTMIGSGIFVSPLGFWR 345
++G + ++G +IGSGIF++P R
Sbjct: 6 KMGFLGATSYVIGNIIGSGIFITPASILR 34
>AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid
transporter protein5, isoform a protein.
Length = 537
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+ +L S+G+S +IW+ C T +G ++AY AF
Sbjct: 29 PASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSIAFA 88
Query: 507 FSWVSTLVLKPSQMAIICLSFAKYAVE 587
F WVS L+ P+ +AI +F +Y +E
Sbjct: 89 FMWVSVLMTYPATIAICAETFGQYLIE 115
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 259 RVGLFSGVALIVGTMIGSGIFVSPLGFWR 345
++G + ++G +IGSGIF++P R
Sbjct: 6 KMGFLGATSYVIGNIIGSGIFITPASILR 34
>Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical
protein T11F9.4 protein.
Length = 523
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +3
Query: 327 PSGLLARTGSVGISFIIWMACXXXXXXXXXXXXXXXTMNTSSGAEYAYFMDAFGGPPAFL 506
P+ ++ SVG+S IW+ T SG ++AY P AF
Sbjct: 42 PTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRLSGGDFAYLCFMKWYPVAFA 101
Query: 507 FSWVSTLVLKPSQMAIICLSFAKY 578
F + + P+ +A+ +FA+Y
Sbjct: 102 FMCIGCTINYPATLAVQAQTFAEY 125
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 220 SDAAPDDPVHLKRRVGLFSGVALIVGTMIGSGIFVSP 330
S + PDD +++GL ++ IVG ++GSGIF++P
Sbjct: 8 SASMPDDS--RSQKMGLLGAISYIVGNIVGSGIFITP 42
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 171 GSVRRWQLKPRRQAGGVGRSSGRPCSPQETGGTLQWGGSNCRH 299
GS RR + ++ G+G SS RP S + TG + G +C H
Sbjct: 130 GSPRRGSFRSSPRSDGMGSSSKRPRSGRRTGRRGRGGPGHCFH 172
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical protein
C44B9.4 protein.
Length = 1150
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 150 RCRRRHDGSVRRWQLK--PRRQAGGVGRSSGRPCSPQETGGTLQWGGSNCRH 299
R R+ D ++ + Q K P+ G GR GRP + + G++ GG + RH
Sbjct: 848 RNRKEGDTTIPKQQRKRNPQPVGRGRGRGGGRPRGSRSSRGSMDDGGGSRRH 899
>AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical
protein Y53H1C.1b protein.
Length = 527
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +1
Query: 238 DPVHLKRRVGLFSGVALIVGTMIGSGIFVSP 330
D + ++GL+S ++ ++ +IG+GIF++P
Sbjct: 12 DVAATRHQMGLWSCMSYVIANIIGAGIFITP 42
>AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical
protein Y53H1C.1a protein.
Length = 541
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +1
Query: 238 DPVHLKRRVGLFSGVALIVGTMIGSGIFVSP 330
D + ++GL+S ++ ++ +IG+GIF++P
Sbjct: 12 DVAATRHQMGLWSCMSYVIANIIGAGIFITP 42
>Z69884-8|CAA93752.2| 582|Caenorhabditis elegans Hypothetical
protein F31F6.6 protein.
Length = 582
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 453 GAEYAYFMDAFGGPPAFLFSWVS----TLVLKPSQMAIICLSFAKYAVEPFVAECE 608
G+E A M F G FL W+S T ++ P ++I + + +E VA CE
Sbjct: 124 GSEPARVMAGFMGVTGFLSMWISNTATTALMVPILQSVITELVSNHRMEDLVALCE 179
>U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid
transporter protein 4 protein.
Length = 526
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/26 (34%), Positives = 21/26 (80%)
Frame = +1
Query: 253 KRRVGLFSGVALIVGTMIGSGIFVSP 330
+ ++GL+S ++ ++ +IG+GIF++P
Sbjct: 17 RHQMGLWSCMSYVIANIIGAGIFITP 42
>AY090484-1|AAM11893.1| 582|Caenorhabditis elegans low-affinity
dicarboxylate transporterINDY1 protein.
Length = 582
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 453 GAEYAYFMDAFGGPPAFLFSWVS----TLVLKPSQMAIICLSFAKYAVEPFVAECE 608
G+E A M F G FL W+S T ++ P ++I + + +E VA CE
Sbjct: 124 GSEPARVMAGFMGVTGFLSMWISNTATTALMVPILQSVITELVSNHRMEDLVALCE 179
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
protein F31E3.4 protein.
Length = 1131
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 350 RLSGHKLHHLDGMW--PALVAWSACVCGIRDNEYII 451
RL H+ H+DG W PAL+A+ ++ +E II
Sbjct: 840 RLHDHEARHIDGRWKLPALLAYKKKNFDVKTSEDII 875
>U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical
protein K09E3.1 protein.
Length = 675
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 448 HLALNTPISWTPSGAHPHSSFH 513
H A+N+ + + +GAH +S+FH
Sbjct: 377 HQAINSQVRYPSAGAHDYSAFH 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,396,999
Number of Sequences: 27780
Number of extensions: 389571
Number of successful extensions: 1161
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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