Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10f01r
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    55   6e-07
UniRef50_A0E6A7 Cluster: Chromosome undetermined scaffold_8, who...    32   5.0  
UniRef50_A5DK01 Cluster: Putative uncharacterized protein; n=1; ...    31   8.8  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 55.2 bits (127), Expect = 6e-07
 Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -3

Query: 306 LSIGTIASNDRLLRSFSVTRGVTATS-QIVDLRYTAPNSMRIRAIRVRQVGASQFATXXX 130
           +S+G I ++DRLL + + +R   A   Q V++RYT  +S+ I A+R    G+ Q AT   
Sbjct: 76  MSLGNIGASDRLLSASTHSRNPIANQVQTVNVRYTGSSSIIILAVRA--YGSGQGATARV 133

Query: 129 XXXXXGWNTVTLRFINSPRRGFNFNVQIWG 40
                G N++T++  ++  RGF++ ++IWG
Sbjct: 134 VEGYLGRNSITIQLQSARGRGFHYRIEIWG 163


>UniRef50_A0E6A7 Cluster: Chromosome undetermined scaffold_8, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_8,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 341

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = -3

Query: 300 IGTIASNDRLLRSFSVTRGVTATSQIVDLRYTAPNSMRIRAIRVRQ 163
           +G+ AS+DRL++     +    T QI D  +TAPNS+ +  + ++Q
Sbjct: 37  LGSEASDDRLVQCLRQVQTNGQTPQISDALFTAPNSVLVGNVILKQ 82


>UniRef50_A5DK01 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 251

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -3

Query: 327 STNRALVLSIGTIASNDRLLRSFSVTRGVTATSQIVDLRYTAPNSMRIRAIRVRQVGAS 151
           S+  AL   IGT+A+ ++L+ + S+  GV  T    D+R    ++M+  A R   +  S
Sbjct: 151 SSKAALDHLIGTVAAEEKLVHTISIAPGVVDTEMQGDIRTKFSDNMKESAERFHDLHKS 209


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,570,059
Number of Sequences: 1657284
Number of extensions: 8054554
Number of successful extensions: 22095
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22089
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)