Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10e24r
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.55 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   6.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   6.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.0  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 450 ASTAPGGTSPFVENCQANMDGTSTSNWSFRTSSPPKEI*H 569
           ++ APG + P V +C      ++  N+S  +S+    + H
Sbjct: 124 SAAAPGPSDPSVSSCHQGFSSSTWCNYSAYSSASRHHVDH 163


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 604 CHLRGELFPRRSHHXQHRY 660
           C+   E FP RSH  Q  Y
Sbjct: 309 CYKLMEKFPERSHEQQELY 327


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 80  LHKICHITKLIHT 118
           LH+ICHI +L HT
Sbjct: 110 LHQICHICEL-HT 121


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 150 QIKIPFSDKCLTKKKKQKNYV 212
           QIKI F ++ +  KK++KN V
Sbjct: 128 QIKIWFQNRRMKFKKEEKNKV 148


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 150 QIKIPFSDKCLTKKKKQKNYV 212
           QIKI F ++ +  KK++KN V
Sbjct: 148 QIKIWFQNRRMKFKKEEKNKV 168


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 405 LTLPK*SFSPSAVEPASTAP 464
           LT+PK   +PS ++P    P
Sbjct: 146 LTMPKYEPNPSIIDPGPALP 165


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 405 LTLPK*SFSPSAVEPASTAP 464
           LT+PK   +PS ++P    P
Sbjct: 146 LTMPKYEPNPSIIDPGPALP 165


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 595 PERCHLRGELFPRRSH 642
           P RCH   +  P RSH
Sbjct: 346 PHRCHGNLQSCPTRSH 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,398
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)