Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e23r
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 36 0.038
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_38556| Best HMM Match : RVP (HMM E-Value=1.4) 31 0.61
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 31 0.61
SB_43706| Best HMM Match : RVP (HMM E-Value=1.4) 31 0.61
SB_22574| Best HMM Match : RVP (HMM E-Value=1.4) 31 0.61
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 31 0.61
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 29 2.5
SB_56925| Best HMM Match : RVP (HMM E-Value=2.3) 29 3.3
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_44556| Best HMM Match : RVP (HMM E-Value=2.3) 29 3.3
SB_7574| Best HMM Match : RVP (HMM E-Value=2.3) 29 3.3
SB_1949| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_34639| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-25) 29 4.3
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 28 5.7
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 27 9.9
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018) 27 9.9
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 40.7 bits (91), Expect = 0.001
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Frame = +3
Query: 21 VDDELGDATPEHGCTSAAIGPSG*TGIFSRKLLTAGPTSRPKRLIWR-LDLTSPIVIAAP 197
+DD+ GD + E GC PS T + R T T+ PK+ ++ T P I +P
Sbjct: 26 LDDDCGDESDERGC-----APSAATQVSGR--TTPRATTTPKKATSETMNFTKPAGILSP 78
Query: 198 MSLTMMLSARETEAVASATTFSRASPPEAKDLXTRLKMRISPSAEPTDAETLGTARTKLS 377
+ L+ + T + S T R + + + R + + SA+PT T+GT T S
Sbjct: 79 VVLSTQRTFLRTTPIPS-TVKPRLTTTNSSTVTVRTTIGDTNSAKPTSV-TIGTIST-AS 135
Query: 378 RVPT*LTRRICRE-LKSSALTSVT 446
R T R I L++SA + T
Sbjct: 136 RTTTPTHRNISETGLRTSATSRKT 159
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 35.5 bits (78), Expect = 0.038
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 197 DVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPXDAXENADFSFSGTD*C*NSGNSQD*V 373
DV+D D V +GD G+ + +DV G S G + + + D S +G + N N D V
Sbjct: 166 DVSDGDDVSDGDVDGANNCDDVSNGASDGDDVSNGSSDGDDVS-NGANDVSNGANDGDDV 224
Query: 374 ESGADVADTTHMQGAEVISLDVSHAAREVNDV 469
+ A+ D GA DVS+ A + +DV
Sbjct: 225 SNVANDGDDV-SNGAN-DGDDVSNGANDCDDV 254
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 32.7 bits (71), Expect = 0.26
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Frame = -3
Query: 436 VKADDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFAS 278
V D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+
Sbjct: 372 VTVDSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSF 430
Query: 277 GGLALENVVAEATASVSLAD--NIIVSDIGAAITIGD 173
GL +EN+ E A + +I V I +GD
Sbjct: 431 EGLVVENLDVEVLAGTPFMEKNDIAVRPAKGQIILGD 467
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 317 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 375
Query: 268 ALENVVAEATASVSLAD--NIIVSDIGAAITIGD 173
+EN+ E A + +I V I +GD
Sbjct: 376 VVENLDVEVLAGTPFMEKNDIAVRPAKGQIILGD 409
>SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 230
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 73 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 131
Query: 268 ALENVVAEATASVSLAD--NIIVSDIGAAITIGD 173
+EN+ E A + +I V I +GD
Sbjct: 132 VVENLDVEVLAGTPFMEKNDIAVRPAKGQIILGD 165
>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 1283
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 329 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLHVVGETRLSFTRADKSFSFEGL 387
Query: 268 ALENVVAEATASVSLAD--NIIVSDIGAAITIGD 173
+EN+ E A + +I V I +GD
Sbjct: 388 VVENLDVEVLAGTPFMEKNDIAVRPAKGQIILGD 421
>SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 577
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 328 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 386
Query: 268 ALENVVAEATASVSLAD--NIIVSDIGAAITIGD 173
+EN+ E A + +I V I +GD
Sbjct: 387 VVENLDVEVLAGTPFMEKNDIAVRPAKGQIILGD 420
>SB_22574| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 382
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 225 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 283
Query: 268 ALENVVAEATASVSLAD--NIIVSDIGAAITIGD 173
+EN+ E A + +I V I +GD
Sbjct: 284 VVENLDVEVLAGTPFMEKNDIAVRPAKGQIILGD 317
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 338 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 396
Query: 268 ALENVVAEATASVSLAD--NIIVSDIGAAITIGD 173
+EN+ E A + +I V I +GD
Sbjct: 397 VVENLDVEVLAGTPFMEKNDIAVRPAKGQIILGD 430
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Frame = -3
Query: 406 MRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGLALENVVA 248
M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL +EN+
Sbjct: 1 MIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDV 59
Query: 247 EATASVSL--ADNIIVSDIGAAITIGD 173
E A ++I V I +GD
Sbjct: 60 EVLAGTPFMETNDIAVRPAKGQIILGD 86
>SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -3
Query: 280 SGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKSNLQIN 149
SGG L A+A +VSL+D+ S A I++ D++ +LQ++
Sbjct: 665 SGGRTLVQAAADAALAVSLSDH--CSQPSAPISLYDLRDSLQVH 706
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/99 (25%), Positives = 42/99 (42%)
Frame = +3
Query: 93 TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRAS 272
+G+ SR + +GP R + R P +A P L A+ T +A+ S S
Sbjct: 256 SGVHSRPVFDSGPGHRSLK---RFASEGPATMALP--LPDYGDAQTTNEIAANGETSGPS 310
Query: 273 PPEAKDLXTRLKMRISPSAEPTDAETLGTARTKLSRVPT 389
PE+ + + + +A P+D+ + T T PT
Sbjct: 311 EPESSNKSSEPDSTPATNAPPSDSPSTTTPTTPQPPTPT 349
>SB_56925| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 226
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 146 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 204
Query: 268 ALENVVAEATA 236
+EN+ E A
Sbjct: 205 VVENLDVEVLA 215
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 226 LADNIIVSDIGAAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYPDGPIAAEVXPCSG 47
+ ++++++D G T+ + NL + + G V AV + K+P YP I P
Sbjct: 1807 IVESVLINDFGCYFTVN--RYNLAM-MVGSNVMKAVESLAGKVPEYPPEEIPFHERPAHS 1863
Query: 46 VA 41
+A
Sbjct: 1864 LA 1865
>SB_44556| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 305
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 225 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 283
Query: 268 ALENVVAEATA 236
+EN+ E A
Sbjct: 284 VVENLDVEVLA 294
>SB_7574| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 253
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = -3
Query: 427 DDFSSLHMRRVSYVGTRL--NLVLAVPRVSASVGSAE----GEIRI-FXRVXRSFASGGL 269
D ++ +M R+S TRL N+ + VS + GS++ GE R+ F R +SF+ GL
Sbjct: 173 DSGATGNMIRLS-TATRLGCNITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGL 231
Query: 268 ALENVVAEATA 236
+EN+ E A
Sbjct: 232 VVENLDVEVLA 242
>SB_1949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 318 SPSAEPTDAETLGTA-RTKLSRVPT*LTRRICRELKSSALTSVTRPEKLMMSDAP 479
S +A PT++ GT TK P+ T ++ RE + SVT PEK + P
Sbjct: 58 SNNAPPTESNKNGTKLTTKGDSSPSAYTLKVIRESLRAGSVSVTPPEKSPQTPLP 112
>SB_34639| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-25)
Length = 941
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/106 (24%), Positives = 44/106 (41%)
Frame = -3
Query: 352 RVSASVGSAEGEIRIFXRVXRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITIGD 173
R S +G+ G+ ++ L +N V E + + A ++ D G +I +
Sbjct: 38 RTSIQIGTINGKEIVYAVAVSHVVVTDLDGDNAV-ELPKTDNQAVGLLTRD-GQGDSIPE 95
Query: 172 VKSNLQINLFGREVGPAVNNFLEKIPVYPDGPIAAEVXPCSGVASP 35
+ LQI L PA LE +P DGP A + +++P
Sbjct: 96 YRPELQIGLLIGINCPAAFEPLEVLPSQRDGPFAIRLRHGRSISTP 141
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 115 NFLEKIPVYPDGPIAAEVXPCSGVASPNSS 26
+FL PV P G ++ E P SG SPN++
Sbjct: 659 DFLGSKPVSPPGRVSPEGSPRSGSPSPNAT 688
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/116 (23%), Positives = 49/116 (42%)
Frame = +2
Query: 236 SGSLSNDVLKGKSSGSERPXDAXENADFSFSGTD*C*NSGNSQD*VESGADVADTTHMQG 415
SGS +N + KS + +P EN D + N+G+ D AD+ +
Sbjct: 19 SGSTTNVDVNSKSETASKPHIPTENYDLDDRLSL---NAGDDSDGCTKKADLTS----KN 71
Query: 416 AEVISLDVSHAAREVNDV*CTRRAPGASVAVTADRISRSQQFTDFIEXV*DHDVKD 583
+I D ++ ++ + SV + DR+S Q ++ + + D +VKD
Sbjct: 72 TTLIDKDAGSLTKDPSE----QDTNPESVFMAKDRVSAIQSLCEYEDSIEDGEVKD 123
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 27.5 bits (58), Expect = 9.9
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +3
Query: 174 SPIVIA-APMSLTMMLSARETEAVASATTFSRASPPEAKDLXTRLKMRISPSAEPTDAET 350
+P +A AP++ T+ +A + + +++T S PEAK A+ T ET
Sbjct: 146 APAAVAPAPVTTTIPQAATASPSTQASSTAQEDSKPEAK----------PDEAKSTSTET 195
Query: 351 LGTARTKLSRVPT*LTRRICRELKSSALTSVTRPEKLM 464
+A T S P T R E SAL + T E L+
Sbjct: 196 AASATTTAS-TPAASTPRSYIEEAESALATGTEYEGLV 232
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 173 IANSYCSSDVTDNDV-VCEGDGSGSLSNDVLKGKSSGS 283
+ +S+ + TD D + +G+GSGS N + G +GS
Sbjct: 695 LVDSHTPKEFTDTDAKLLQGEGSGSQHNVMRGGSGAGS 732
>SB_33949| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 720
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -3
Query: 358 VPRVSASVGSAEGEIRIFXRVXRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITI 179
V V AS+ + G + + + A GG A+ + A A + ++ D+GA + +
Sbjct: 528 VATVLASMAAKGGHVEVLKVMDEYCADGGEAMTEAMGAAAAEGQVGVVELLIDLGADVDV 587
Query: 178 G 176
G
Sbjct: 588 G 588
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,380
Number of Sequences: 59808
Number of extensions: 320026
Number of successful extensions: 1099
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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