Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e23f
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 37 0.014
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_38556| Best HMM Match : RVP (HMM E-Value=1.4) 29 2.9
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 29 2.9
SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_43706| Best HMM Match : RVP (HMM E-Value=1.4) 29 2.9
SB_22574| Best HMM Match : RVP (HMM E-Value=1.4) 29 2.9
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 29 2.9
SB_14604| Best HMM Match : PT (HMM E-Value=5.1) 29 2.9
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 29 3.8
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 28 5.0
SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5) 28 6.6
SB_1949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 27 8.8
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = -2
Query: 507 DVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*V 331
DV+D D V +GD G+ + +DV G S G + +++ D S +G + N N D V
Sbjct: 166 DVSDGDDVSDGDVDGANNCDDVSNGASDGDDVSNGSSDGDDVS-NGANDVSNGANDGDDV 224
Query: 330 ESGADVADTTQMQGAEVISLDVSHAAREVNDV 235
+ A+ D GA DVS+ A + +DV
Sbjct: 225 SNVANDGDDVS-NGAN-DGDDVSNGANDCDDV 254
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--N 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +
Sbjct: 336 NITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKND 395
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 396 IAVRPAKGQIILGD 409
>SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 230
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--N 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +
Sbjct: 92 NITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKND 151
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 152 IAVRPAKGQIILGD 165
>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 1283
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--N 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +
Sbjct: 348 NITTSSQSVSQADGSSQLHVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKND 407
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 408 IAVRPAKGQIILGD 421
>SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 424 SGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKSXLQIN 555
SGG L A+A +VSL+D+ S A I++ D++ LQ++
Sbjct: 665 SGGRTLVQAAADAALAVSLSDH--CSQPSAPISLYDLRDSLQVH 706
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL--ADN 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A ++
Sbjct: 13 NITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMETND 72
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 73 IAVRPAKGQIILGD 86
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--N 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +
Sbjct: 394 NITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKND 453
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 454 IAVRPAKGQIILGD 467
>SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 577
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--N 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +
Sbjct: 347 NITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKND 406
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 407 IAVRPAKGQIILGD 420
>SB_22574| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 382
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--N 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +
Sbjct: 244 NITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKND 303
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 304 IAVRPAKGQIILGD 317
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +1
Query: 331 NLVLAVPRVSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--N 489
N+ + VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +
Sbjct: 357 NITTSSQSVSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKND 416
Query: 490 IIVSDIGAAITIGD 531
I V I +GD
Sbjct: 417 IAVRPAKGQIILGD 430
>SB_14604| Best HMM Match : PT (HMM E-Value=5.1)
Length = 344
Score = 29.1 bits (62), Expect = 2.9
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = -3
Query: 425 EAKDLRTRLKMRISPSAEPTD-AETLGTARTKLSRXPT*LTRRK----CRELKSSALTSV 261
+A LRT+ K + PS P D A TLGT + R T T+ + + A T
Sbjct: 141 QATTLRTKPKPSV-PSHNPGDQATTLGTNKNPRDRAKTLGTKPQPWGPSHNPQDQAKTLG 199
Query: 260 TRPEKLMMSDAPGGLQEPA*PSR 192
T+P+ S P Q+P+ PS+
Sbjct: 200 TKPQPWGPSHNPRDQQKPSGPSQ 222
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 531 IANSYCSSDVTDNDV-VCEGDGSGSLSNDVLKGKSSGSERPQDAA 400
+ +S+ + TD D + +G+GSGS N + G +GS +++A
Sbjct: 695 LVDSHTPKEFTDTDAKLLQGEGSGSQHNVMRGGSGAGSGNLKESA 739
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -3
Query: 479 RETEAVASATTFSRASP--PEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRXPT*LT 306
++T++ +S T R P P + D +++L A PT + ++ T +S T ++
Sbjct: 983 QQTKSPSSYPTVIRPKPSLPYSHDFKSKLSSPYHSEARPTSSSSVQTGEKTISSHITGVS 1042
Query: 305 RRKCRELKSSALTSVTRPEKLMMSD 231
+ + ++ ++ T P + D
Sbjct: 1043 TAQITSMSTTTESTTTHPVRRTSRD 1067
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 28.3 bits (60), Expect = 5.0
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = -3
Query: 530 SPIVIA-APMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAET 354
+P +A AP++ T+ +A + + +++T S PEAK A+ T ET
Sbjct: 146 APAAVAPAPVTTTIPQAATASPSTQASSTAQEDSKPEAK----------PDEAKSTSTET 195
Query: 353 LGTARTKLSRXPT*LTRRKCRELKSSALTSVTRPEKLM 240
+A T S P T R E SAL + T E L+
Sbjct: 196 AASATTTAS-TPAASTPRSYIEEAESALATGTEYEGLV 232
>SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5)
Length = 207
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 NLVLAVPRVSASVG-SAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDI 507
N+ + R +AS G + EIR+ + + GGLAL + AT L ++VS +
Sbjct: 12 NISASRNRHTASFGHGGDKEIRVQYAEIVAAVLGGLALAWIADLATGRRGLGATVLVSGV 71
Query: 508 GAA 516
G A
Sbjct: 72 GLA 74
>SB_1949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 386 SPSAEPTDAETLGTA-RTKLSRXPT*LTRRKCRELKSSALTSVTRPEKLMMSDAP 225
S +A PT++ GT TK P+ T + RE + SVT PEK + P
Sbjct: 58 SNNAPPTESNKNGTKLTTKGDSSPSAYTLKVIRESLRAGSVSVTPPEKSPQTPLP 112
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 250 SGRVTDVKADDFSSLHLRRVSYVGXRLNLVLAVPRVSASVGSAEGEIRIFSRVLRSFASG 429
+GRV DD S H RV+ G L +VL G E + S L+SF
Sbjct: 38 TGRVDQFSKDDIESAHWLRVA-CGQELKIVLKSGLQFRFDGFKESDFANLSEFLKSFF-- 94
Query: 430 GLALENV 450
G+ LE +
Sbjct: 95 GVKLEEM 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,757,269
Number of Sequences: 59808
Number of extensions: 300004
Number of successful extensions: 988
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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