Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10e17f
         (642 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g51540.1 68414.m05801 kelch repeat-containing protein contain...    30   1.1  
At1g24480.1 68414.m03083 hypothetical protein                          29   3.5  
At5g42170.1 68418.m05133 family II extracellular lipase, putativ...    28   4.6  
At4g19090.1 68417.m02814 hypothetical protein contains Pfam doma...    28   4.6  
At2g01050.1 68415.m00010 hypothetical protein                          28   6.1  
At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containi...    27   8.0  

>At1g51540.1 68414.m05801 kelch repeat-containing protein contains
            Pfam profile PF01344: Kelch motif
          Length = 1036

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +2

Query: 137  HTEVQWKVMKNSI-----TDMKHISTEKTLMVGKSAKE*MTSVVW 256
            H E  WKV+ NSI     T  KH  T+K ++VG+  +  + ++ W
Sbjct: 938  HIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNTLKW 982


>At1g24480.1 68414.m03083 hypothetical protein
          Length = 239

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 226 RKGMNDLCGMDLVP-DPKIIKAALH 297
           R G+ND  GMDLVP  P ++K   H
Sbjct: 113 RVGVNDSVGMDLVPYPPLVVKGDFH 137


>At5g42170.1 68418.m05133 family II extracellular lipase, putative
           similar to family II lipase EXL3 [Arabidopsis thaliana]
           GI:15054386; contains InterPro Entry IPR001087 Lipolytic
           enzyme, G-D-S-L family
          Length = 319

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 352 KDKCGNKVNEIYPYIIQEIKPTLTELGIDTPE 447
           K +C  K+NE+      +I PTL  LG + P+
Sbjct: 202 KRRCSEKLNEVARNFNAKISPTLEALGKELPD 233


>At4g19090.1 68417.m02814 hypothetical protein contains Pfam domain,
           PF04578: Protein of unknown function, DUF594
          Length = 751

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 459 VAKLLRCVNTQFGESRLDLLNDVWVDFI 376
           +AK L+ V   FGE +  +L+ VW++F+
Sbjct: 687 LAKELQRVEKNFGEDKWKILSKVWLEFL 714


>At2g01050.1 68415.m00010 hypothetical protein
          Length = 515

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 239 MTSVVWISFPTQRLSKLPFMHADESMIMPLQSGL*KPAKTNVET 370
           +T+ VW+     RLS +P+ +    ++M +  GL +P K ++ T
Sbjct: 162 VTTPVWV-----RLSNIPYNYYHRCLLMEIARGLGRPLKVDMNT 200


>At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containing
           protein / CBS domain-containing protein contains CBS and
           PPR domain repeats
          Length = 580

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +1

Query: 235 MNDLCGMDLVPDPKIIKAALHACRRVNDYALAVRFIEACKDKCGNKVNEIYPYIIQEIKP 414
           ++++  + L PD       +HAC +  D   A++F    K+    K  E Y   +Q    
Sbjct: 213 LDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKE----KAEEYYDDFLQPDVV 268

Query: 415 TLTEL 429
           T T L
Sbjct: 269 TYTTL 273


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,478,882
Number of Sequences: 28952
Number of extensions: 274564
Number of successful extensions: 696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)