Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e16f
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 78 6e-15
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 76 3e-14
U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 32 0.41
AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B prote... 32 0.41
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 29 3.8
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL023845-6|CAA19536.1| 168|Caenorhabditis elegans Hypothetical ... 28 5.0
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 6.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 6.7
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 8.8
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 8.8
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 8.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 8.8
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 27 8.8
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 8.8
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 27 8.8
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 27 8.8
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 77.8 bits (183), Expect = 6e-15
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Frame = +3
Query: 177 ARPVRGEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGL 356
ARP+ P K RL +P+ WF F TGV+GPY F GL +L +KE++V E + + +
Sbjct: 99 ARPMY--PPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFEEQGHMTV 156
Query: 357 SLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQG- 533
++ + G K+ L + N + +G Q + L++A+E +KT + +
Sbjct: 157 GWILFYLLVTRTAGYKIDQGLYNGYQERVN-FFKGLIQ--EDLKEAVEFKKTSAKQTESL 213
Query: 534 ---QELLIQAKKENVLLQLEAAYRERLMYAYSEVKRRLDYQLE 653
+E A KE++ LQLEA YR+ + +E+KRR+DY E
Sbjct: 214 NSIKESYPTALKESMALQLEATYRKNVQSVATELKRRIDYLKE 256
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 75.8 bits (178), Expect = 3e-14
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Frame = +3
Query: 198 PGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVY 377
P K RL +P+ WF F TG +GPY F GL +L +KE++V E + + + ++
Sbjct: 102 PPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFEEQGHMTVGWILFYL 161
Query: 378 VAHVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWR----AQGQELL 545
+ G K+ A L K+ + + +G Q + L++A++ KT + A +E +
Sbjct: 162 LVSRTAGYKIDAGLYKDYQERVG-FFKGLIQ--EDLKEAVDFRKTSAAQTASFAALKEGM 218
Query: 546 IQAKKENVLLQLEAAYRERLMYAYSEVKRRLDYQLE 653
+ K+++ LQLEAAYR+ + +E+KRR++Y E
Sbjct: 219 PTSLKDSMQLQLEAAYRKNVQTISNEIKRRIEYLKE 254
>U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical
protein R151.8 protein.
Length = 731
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -3
Query: 450 IRSRSLQLPCP-TKQPILVRISREPHTP*PAVTVRSNIRAPLHRFPCCTGMLPD 292
+R R LQ P P T + + +EP T T I P P CT +L D
Sbjct: 26 LRERPLQSPAPITSTSLTSGLDKEPQTSTDNTTTNGEILNPSSSEPTCTSVLSD 79
>AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B protein
protein.
Length = 315
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -3
Query: 450 IRSRSLQLPCP-TKQPILVRISREPHTP*PAVTVRSNIRAPLHRFPCCTGMLPD 292
+R R LQ P P T + + +EP T T I P P CT +L D
Sbjct: 26 LRERPLQSPAPITSTSLTSGLDKEPQTSTDNTTTNGEILNPSSSEPTCTSVLSD 79
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 414 WLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQ----WRAQGQELLIQAKKENVLLQL 581
W DK E +W + +T E I+ E E W+ +++L + K+EN LL+L
Sbjct: 447 WSDKRNEENAIKWKQ---ETDNIPEVVIKNEDDETDVLYWKLSDEDVLERCKEENELLKL 503
Query: 582 EAAYRERL 605
+ +L
Sbjct: 504 DLLTEHQL 511
>Z70286-1|CAA94294.2| 194|Caenorhabditis elegans Hypothetical
protein K08C7.4 protein.
Length = 194
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 467 PNRESTGGRNRGREDG--AVARAGTGAPHPGQEGERAPAARGRLQGEA 604
P R + G R+ +E G +V + A ++ ERAP+ARGR Q A
Sbjct: 87 PRRSTRGKRSYDQETGGRSVRKVVKKAKEVNKKPERAPSARGRGQKPA 134
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 317 LAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKG 171
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 317 LAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKG 171
LAA+ C T +V+ V E E ++ K+ WL+P SKG
Sbjct: 302 LAARNCLITKELNVKISDFGLSVNESETKMKSLKKAPIRWLSPETFSKG 350
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +3
Query: 423 KEVEATENEWNEGRNQTVKALEDA-IEGEKT----EQWRAQGQELLIQAKK 560
KE+EA +W + + K L + +E +T E+W+ + QE+ IQ K+
Sbjct: 250 KEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQ 300
>AL023845-6|CAA19536.1| 168|Caenorhabditis elegans Hypothetical
protein Y51B9A.8 protein.
Length = 168
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 287 CGSGNIPVQQGNLCNGARILLRTVTAGHGVCG 382
C +GN V G+ C A+++ T+T G+ G
Sbjct: 36 CPAGNTEVSSGDCCPTAQVVNGTITCNGGLVG 67
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 413 LVGQGXXXXXXXXXXXXXPNRESTGGR-NRGREDGAVARAGTGAPHPGQEGERAPAARG 586
L+G G P GG G + G G G P PGQ G P G
Sbjct: 157 LMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 413 LVGQGXXXXXXXXXXXXXPNRESTGGR-NRGREDGAVARAGTGAPHPGQEGERAPAARG 586
L+G G P GG G + G G G P PGQ G P G
Sbjct: 437 LMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 423 KEVEATENEWNEGRNQTVKALEDAIE-GEKTEQWRAQGQELLIQAKKENVLLQLEAAYRE 599
KE E + E + + + + E + E+ ++ R +E+ ++ K E ++LEA RE
Sbjct: 440 KEEERKKKEEEDEKRRKAEESERVRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMRE 499
Query: 600 RLMYAYSEVKRR 635
+ A E+KRR
Sbjct: 500 KAEQA--EIKRR 509
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 27.5 bits (58), Expect = 8.8
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Frame = +3
Query: 228 EEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEY--YSGLSLLVMVYVAHVKFGP 401
EEW F G YT+ L TY KE ++ Y +S + ++ KF
Sbjct: 1314 EEWDSFQFCSKQHWGIYTWPAKLITYAPLKEQTAIDRSYEQFSEVEKYIVDMFQDEKFMT 1373
Query: 402 KLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKE 563
+L E++ + +N + L T +R Q E+L+ + KE
Sbjct: 1374 RLRELFSIEMKKEDEVFNAVHFSLFQGLFRCYGDVLTHAFRTQ-LEILLASSKE 1426
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +2
Query: 548 PGQEGERAPAARGRLQGEAHV---RLLRG-EAASGLP 646
PG++GE PAAR +G+A + LRG + SGLP
Sbjct: 1021 PGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLP 1057
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +2
Query: 548 PGQEGERAPAARGRLQGEAHV---RLLRG-EAASGLP 646
PG++GE PAAR +G+A + LRG + SGLP
Sbjct: 1020 PGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLP 1056
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +2
Query: 548 PGQEGERAPAARGRLQGEAHV---RLLRG-EAASGLP 646
PG++GE PAAR +G+A + LRG + SGLP
Sbjct: 1020 PGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLP 1056
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +2
Query: 548 PGQEGERAPAARGRLQGEAHV---RLLRG-EAASGLP 646
PG++GE PAAR +G+A + LRG + SGLP
Sbjct: 1021 PGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLP 1057
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 423 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRER 602
K EA + E + ++ + A+E E + + + + KK+N ++ EAA R R
Sbjct: 556 KREEAARLQKLEQEAREIEERKAALEAEDRRKREIEEYNRMCE-KKKNEIIAKEAADRMR 614
Query: 603 LMYAYSEVKRRLD 641
L A +RRL+
Sbjct: 615 LEEATERERRRLE 627
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +2
Query: 548 PGQEGERAPAARGRLQGEAHV---RLLRG-EAASGLP 646
PG++GE PAAR +G+A + LRG + SGLP
Sbjct: 1057 PGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLP 1093
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 465 SDLRSIRSRSLQLPCPTKQPILVRISREP 379
SD+ S+R++ ++P T QP+L ++P
Sbjct: 541 SDIESVRNKKRKVPATTSQPMLALDLKKP 569
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -3
Query: 465 SDLRSIRSRSLQLPCPTKQPILVRISREP 379
SD+ S+R++ ++P T QP+L ++P
Sbjct: 829 SDIESVRNKKRKVPATTSQPMLALDLKKP 857
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 215 WLYS*RMVPILPLENWCDGSLHFWC 289
W Y V ++ L NWC H WC
Sbjct: 95 WFYLHSKVHLISLANWCSSVAH-WC 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,228,878
Number of Sequences: 27780
Number of extensions: 327596
Number of successful extensions: 1109
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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