Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10e13r
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0743 + 24835349-24836009,24836925-24837068,24837154-248373...    31   0.76 
01_05_0283 - 20354065-20354154,20354579-20354890,20355566-203557...    30   1.8  
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57...    30   2.3  
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825...    29   5.4  
10_08_1033 - 22444757-22444862,22444965-22445542                       28   7.1  
07_03_0804 - 21639016-21639231,21639379-21639555,21640120-216405...    28   7.1  

>01_05_0743 +
           24835349-24836009,24836925-24837068,24837154-24837306,
           24837627-24837742,24837826-24837993,24838610-24838737,
           24838827-24838926,24839119-24839205
          Length = 518

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 185 TQLKHPTQQKHP*PQKHPR*QKHLTQQKHPRPQKPDTETSA 63
           T   H    + P PQ  P+ Q    QQ+ PRPQ+P    +A
Sbjct: 5   TSRHHRAAPEQPPPQPKPKPQPQQQQQQWPRPQQPTPPPAA 45


>01_05_0283 -
           20354065-20354154,20354579-20354890,20355566-20355763,
           20356371-20356754,20357445-20357858,20359771-20360022
          Length = 549

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 170 PTQQKHP*PQKHPR*QKHLTQQKHPRPQKPDTETSA 63
           P QQ  P PQ  P  Q+    Q  P+PQ P+ E  A
Sbjct: 37  PQQQPQPQPQSEPEPQQQPQPQPQPQPQ-PEAEAEA 71


>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
            579266-579370,579975-580028,580244-580344,580454-581423,
            582030-582203,582341-582643,582719-582856,582993-583247,
            584230-584370,585008-585289,585395-585540,585627-585690,
            585723-585799,586285-586301,587728-587867,587972-588029,
            588121-588218,588727-588776,589260-589743
          Length = 2630

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
 Frame = -1

Query: 573  AYNFSPTIQPSTI---CTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQ-------VGVTS 424
            A NF P +QPST     +L  N+ +Q+ CQ D      V  ++G  TQ       V V  
Sbjct: 1956 AQNFQPELQPSTSLFDASLESNNISQTDCQSDRA---VVFLQEGATTQQHLLDTGVVVDD 2012

Query: 423  FVSSEGCHVDIPAGFI 376
             V+ E  H + P   I
Sbjct: 2013 IVAEEPSHSESPTYII 2028


>08_02_0516 +
           18080706-18080760,18081796-18081885,18082479-18082573,
           18083658-18083726,18083812-18084393
          Length = 296

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 182 QLKHPTQQKHP*PQKHPR*QKHLTQQKHPRPQKP 81
           Q   P  Q  P PQ+ P  Q  L  Q HP+PQ+P
Sbjct: 231 QQLQPQSQLPPQPQQPP--QLQLQSQLHPQPQQP 262



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 173 HPTQQKHP*PQKHPR*QKHLTQQKHPRPQKP 81
           HP Q  HP  Q+ P+ Q     Q HP+PQ+P
Sbjct: 188 HPQQLLHPQSQQTPQPQ----PQVHPQPQQP 214


>10_08_1033 - 22444757-22444862,22444965-22445542
          Length = 227

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 380 LSGPATTSTGLRRSPV*ISIGHRAQHKHLRQQK 282
           L+  A+ S  LRRSP  + +  R+ H H +QQ+
Sbjct: 8   LTRSASLSPRLRRSPTALCVSPRSMHHHHQQQQ 40


>07_03_0804 -
           21639016-21639231,21639379-21639555,21640120-21640588,
           21640608-21641218
          Length = 490

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 456 LHRSLSEDHRCHPGKWTAWCRCNQACKWW 542
           LH    ED RC P   +  C C++  KWW
Sbjct: 413 LHPYHPEDKRCAPCCMSN-CNCHEPLKWW 440


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,315,428
Number of Sequences: 37544
Number of extensions: 323830
Number of successful extensions: 1026
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)