Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e13f
(661 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 73 3e-13
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 68 6e-12
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 65 6e-11
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 61 9e-10
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 56 2e-08
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 55 4e-08
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 54 8e-08
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 54 8e-08
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 54 8e-08
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 53 2e-07
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 52 5e-07
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 51 7e-07
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 51 1e-06
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 50 2e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 48 7e-06
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 48 9e-06
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 47 1e-05
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 47 2e-05
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 45 5e-05
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 45 5e-05
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 44 8e-05
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 44 1e-04
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 42 6e-04
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 42 6e-04
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 41 8e-04
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.010
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.039
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 36 0.039
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.21
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_569| Best HMM Match : Big_1 (HMM E-Value=1.1) 30 1.9
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 28 7.7
SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 72.5 bits (170), Expect = 3e-13
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIVRAGA 311
R+V G EA GQFP+Q+++ CG ++H W +T AHC + R
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQ----QYCGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 312 VNLTRPGLL----FETTKYIN----HPEYS----ENLNVVQP-HDIGLIDFGRKLEFNDY 452
V L L FE + + H Y E + P DI LI+ R + FN +
Sbjct: 84 VTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRPVVFNFH 143
Query: 453 IQPIRLQRSADKDRNYDNVRLVASGWGRT-WTGSASPENLNWVFLNGISNLRCMVAYNFS 629
+QPI + R + N SGWG T W GS P LN+V + +S+ C +++
Sbjct: 144 VQPICIMRPNISFK--WNTACFISGWGHTRWNGS-QPNVLNFVMVPLVSHATCNKPLSYN 200
Query: 630 PTIQPSTIC 656
TI + +C
Sbjct: 201 GTIHETALC 209
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 68.1 bits (159), Expect = 6e-12
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMV--STVGGVNACGATIIHSNWGLTAAHCTGLR-----V 287
+RIV G A +G +P+Q+S+ V + CG +++ W +TAAHC
Sbjct: 102 TRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKDY 161
Query: 288 TIIVRAGAVNLT-----RPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDY 452
TI V +N T RP + + I HP+Y+ + N +D+ LI L++ND
Sbjct: 162 TIAVGEHDLNATDGYEQRP----DVERIILHPKYAPHNN--HDYDVALIKLASPLQYNDR 215
Query: 453 IQPIRLQRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYN 623
++P+ L S +D +N + SGWG P L+ + +S C AYN
Sbjct: 216 VRPVCLP-SLKEDLE-ENTQCYISGWGHLQEAGHGPWVLHQAAVPLVSRDTCQKAYN 270
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 66.5 bits (155), Expect = 2e-11
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Frame = +3
Query: 108 RERSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC----- 272
R R L I+ G A G++P+Q+S+++ S+ + CG +I W LTAAHC
Sbjct: 537 RVRPLAMPMIMGGANAEHGEWPWQVSMKLNSS-SLPHICGGNVISPWWVLTAAHCVQDER 595
Query: 273 -TGLRVTIIVRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFND 449
+ +++T + N+ + + I+H YS N +D L+ R L F
Sbjct: 596 ASNIKLT-MGEWRLFNVDGTEQVIPVERIISHANYSYN---TVDYDYALLKLTRPLNFTQ 651
Query: 450 YIQPIRLQRSADKDRNYDNVRLVASGWGRT-WTGSASPENLNWVFLNGISNLRCMVAY-N 623
Y+QP+ L D D + V +GWG T + GS SP L V L +++ +C Y
Sbjct: 652 YVQPVCL---PDSDFPAGTLCYV-TGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLT 707
Query: 624 FSPTIQPSTIC 656
S I P C
Sbjct: 708 ASRKITPRMRC 718
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 65.7 bits (153), Expect = 3e-11
Identities = 55/170 (32%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVT--IIVR 302
SRIV G A G +P+Q +R + G + CG T++H W +TA+HC T + VR
Sbjct: 247 SRIVGGTTAQRGAWPWQAMLRYYN---GNHFCGGTLVHPRWVVTASHCVHKLTTGDLYVR 303
Query: 303 AGA---VNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRL- 470
GA T F + HP Y + V +DI L+ R + Y L
Sbjct: 304 MGAHWKDGKTGSEQDFRIQRIFMHPNY--HSPVQYANDIALLLLDRPARLDRYTNLACLA 361
Query: 471 QRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAY 620
RS+ D R SGWGR +G ASP L + +S C AY
Sbjct: 362 PRSSPLP---DGTRCWISGWGRLSSGGASPNVLMQAQVPLVSGQTCSQAY 408
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 64.9 bits (151), Expect = 6e-11
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-TGLR----V 287
P SRIV G +A G++P+Q + + +G CG ++H +W +TA+HC +R
Sbjct: 207 PASRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYK 266
Query: 288 TIIVRAGAVNLTRPGLL-----FETTKYINHPEYSENLNVVQ-PHDIGLIDFGRKLEFND 449
T I+ G N T G++ K H +Y NL Q +D+ LI +
Sbjct: 267 THIISLGGHNKT--GIMSVEQRIGIAKIYLHADY--NLYPHQYNNDVALIRLAKPAIRTR 322
Query: 450 YIQPIRLQRSADKDRNY-DNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNF 626
Y+QP+ L AD ++ +GWGR +G ASPE L +S C ++
Sbjct: 323 YVQPVCL---ADGTVSFPPGTECWITGWGRLHSGGASPEILQQAKTKLLSYAECTKNGSY 379
Query: 627 SPTIQPSTI 653
ST+
Sbjct: 380 EAAAVSSTM 388
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 60.9 bits (141), Expect = 9e-10
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 296
P +RIV G A +G +P+Q +R S G CG ++IH W LTA HC R +
Sbjct: 660 PSTRIVGGTAAKQGDWPWQAQLRSTS---GFPFCGGSLIHPQWVLTATHCVSSRRPTDLN 716
Query: 297 VRAGAVNLTRPGLLFE----TTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDY 452
+R GA N R L E K I HP Y + + + HDI LI + N +
Sbjct: 717 IRLGAHN-RRANLGMEQDIKVEKIIMHPGYRKPVGLA--HDIALIKLLKPANLNRF 769
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 501 DNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAY 620
D R +GWGR +G +P+ L + +S RC AY
Sbjct: 821 DGTRCWITGWGRLASGGTAPDILQQASVPVVSRARCEKAY 860
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTIIVR 302
SRIV G A+ G +P+Q +R T G CG ++IHSNW LTAAHC + ++VR
Sbjct: 389 SRIVGGAAANPGDWPWQAQLR---TTTGFPYCGGSLIHSNWVLTAAHCISSKRPAEVVVR 445
Query: 303 AGA 311
GA
Sbjct: 446 LGA 448
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 56.0 bits (129), Expect = 3e-08
Identities = 48/156 (30%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 296
P SRIV G A G +P+Q+ M+ G CG T++ W +TAAHC + +I
Sbjct: 627 PLSRIVGGSTAPPGAWPWQV---MLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQ 683
Query: 297 VRAGAVNLTRPGLLFETTKYI----NHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPI 464
VR GA + T P E I NHP+Y +DI L+ R I
Sbjct: 684 VRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKR--SSNDIALLRLSRPTILTHRINLA 741
Query: 465 RLQRSADKDRNYDNVRLVASGWGRTWTGSASPENLN 572
+ D + +GWG +G + PE LN
Sbjct: 742 CMPN--DTVHFPNGTMCYITGWGTLSSGGSQPEALN 775
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 55.2 bits (127), Expect = 4e-08
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTII----- 296
RIV G + +G +P+ + IR GG ACG ++I W LTAAHC R I
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRK----GGHVACGGSLISEKWVLTAAHCVTHRNGNILPRSR 162
Query: 297 --VRAGAVNLTRPG----LLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQ 458
V+ G T P L ++ HP++ +V+ D+ LI + ++Y++
Sbjct: 163 FQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFD---HVLFDADLALIKLDGEAIISEYVR 219
Query: 459 PIRLQRSADKDRNYDNVRL-VASGWGRT--WTGSASPENL 569
PI L + D+ + +A GWG+T G S +NL
Sbjct: 220 PICLPETDDQASLISPSKFGMAVGWGKTVGRQGDVSVKNL 259
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +3
Query: 126 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC---TGLRVTII 296
G RIV G EA +P+Q+SIR+ G + CG +++ W LTAAHC +
Sbjct: 28 GVRIVGGDEAVPHSWPWQVSIRLK----GSHICGGSLLSPLWLLTAAHCVIRSNNSADYT 83
Query: 297 VRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQR 476
V GA G + + + H +Y + + HD+ LI + F+ + P+ L +
Sbjct: 84 VIVGAHKRVLDGTEHKLSTFYKHEKYVGGKD--KKHDLALIKLAKPATFSTKVSPVCLPK 141
Query: 477 SADKDRNYDN 506
D + +N
Sbjct: 142 QGDLMKEREN 151
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 54.4 bits (125), Expect = 8e-08
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-----TGLRVTI 293
SR+V+G A + +P+Q+S+R V G + CG ++I +W +TAAHC T T+
Sbjct: 30 SRVVNGDNAQQHSWPWQISLR----VNGRHICGGSLIAKDWVVTAAHCVDRNPTPSGYTV 85
Query: 294 IVRA-GAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRL 470
+V A T F + H ++S +DI L+ ++ +D + + L
Sbjct: 86 VVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR---HLKNDIALLQLHEPVKASDKVNTVCL 142
Query: 471 QRSADKDRNYDNVRLVASGWGRTWTGSAS 557
S R R +GWGRT G ++
Sbjct: 143 PSSG--SRAQAGARCYITGWGRTVGGGSA 169
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 296
P +RIV G A G +P+Q +R T G CG ++I W LTA HC + +I+
Sbjct: 7 PNTRIVGGTAAKHGDWPWQAQLR---TTSGFPYCGGSLIAPQWILTATHCVERKQASSIV 63
Query: 297 VRAGA---VNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLI 419
+R GA V + TK I HP Y + HDI L+
Sbjct: 64 IRLGARRRVATVGTEKDYIVTKVITHPSYHK--PKTYSHDIALL 105
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 54.4 bits (125), Expect = 8e-08
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--VTII 296
P +RIV G +A G +P+Q +R S GG CG T++H W +TAAHC R
Sbjct: 136 PHTRIVGGTKAPPGAWPWQAMLR--SNYGG-QFCGGTLVHPQWVITAAHCVYRRGPNDFK 192
Query: 297 VRAGAVNLTRPGLL-----FETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFN 446
+R GA R G F ++ I HP Y + HDI LI+ + N
Sbjct: 193 IRMGA--HFRKGDYGTEQDFSLSRVITHPSYHKPTRYA--HDIALIELAKPAVIN 243
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 54.4 bits (125), Expect = 8e-08
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGL--RVTII 296
PG+RIV+G EA +P+ S+R + + CGAT+I W +TAAHC + T+I
Sbjct: 322 PGARIVNGQEAVSHSWPWIASLRKGRS--NYHTCGATLIRPGWAITAAHCVMRPDKYTVI 379
Query: 297 VRAGAVNLTRPGLL-FETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQ 473
V + + + + P + + H +S N V DI L++ R ND + L
Sbjct: 380 VGSHSRDASEPSAQNIKVRRVYRHRGFS-MANYVD--DIALLELERSAVINDKVSTACLP 436
Query: 474 RSADKDRNYDNVRLVASGWGR 536
K + +A GWGR
Sbjct: 437 SGEPK---VGAICYIA-GWGR 453
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 90 TFPEIARERSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAH 269
+F + A R PG+R+++G A +P+Q+S+R G ++CG T+I W +TA+H
Sbjct: 15 SFVDAACGRKPPGARVINGQNAQPHSWPWQISLR---PYGRYHSCGGTLISDRWVVTASH 71
Query: 270 C 272
C
Sbjct: 72 C 72
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 54.4 bits (125), Expect = 8e-08
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIVRAG 308
SR+V+G A++ +P+Q+S+R V G + CG ++I W LTAAHC V
Sbjct: 79 SRVVNGDNAAQHSWPWQISLR----VNGRHICGGSLITPEWVLTAAHC----VEDFPHPS 130
Query: 309 AVNLTRPGLL---FETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQRS 479
A + + F TK H ++S + +D+ L+ ++ +D + + L
Sbjct: 131 AHRIKERSAIQQEFRLTKLFKHKDFSMS---HLKNDVALLKLDNPIQPSDKVNTVCLPER 187
Query: 480 ADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNF-SPTIQPSTIC 656
R + +GWGR G E L L S+ C ++ P + S IC
Sbjct: 188 --NSRAQVGAQCFITGWGRLVGGGQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMIC 245
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGG-VNACGATIIHSNWGLTAAHC-TGL----RVT 290
SR+++G +A+ +P+Q+S+RM+S G + CG ++I S W LTAAHC G+ R +
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIRNPRRYS 95
Query: 291 IIVRAGAVN-LTRPGLLFETTKYINHPEYSENL 386
+ V A ++ T+ +K +H +YS +L
Sbjct: 96 VYVGAHELDGTTQVEEKISISKIYSHEKYSSSL 128
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 51.6 bits (118), Expect = 5e-07
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Frame = +3
Query: 126 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC---TGLRVTII 296
G+RI++G EA +P+QLS+R V G + CGA+++ W LTAAHC +
Sbjct: 83 GTRIINGEEAVPNSWPWQLSLR----VYGSHNCGASLLSPGWALTAAHCVQRSSNPADYT 138
Query: 297 VRAGA---VNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIR 467
+ AGA VN +L ++ I+H E+S + ++ +D+ L+ ++ +D I I
Sbjct: 139 LAAGAHRRVNDAHAQVL-RVSQVISHKEFS--MGHLR-NDVTLLRLSAPVQLSDKIGTIC 194
Query: 468 LQRSADK 488
L D+
Sbjct: 195 LPAHGDR 201
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 51.2 bits (117), Expect = 7e-07
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 12/190 (6%)
Frame = +3
Query: 126 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTG--------- 278
G+RI+SG +A +P+ + I + CG T++ W +TAAHC
Sbjct: 349 GTRIISGSDAQPNSWPWMVQINY----NNGHHCGGTLVSPQWVVTAAHCVDHVKDPKNYN 404
Query: 279 -LRVTIIVRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYI 455
L +T+ + + F + I HP+Y E + +DI LI + N Y+
Sbjct: 405 ELAITLGEHKRSAS-EGTEQRFSVARIIVHPQYFEPTAI--NNDIALIKLNKPARLNKYV 461
Query: 456 QPIRLQRSADKDRNYDNVRLVASGWGRTWTG--SASPENLNWVFLNGISNLRCMVAYNFS 629
L R ++ D A+GWG T G + + L L ++ C Y+
Sbjct: 462 NLACLPRQGEE--LSDGKICYATGWGLTVGGDWKSQSDVLKQTPLPVVNRQECQTDYDDI 519
Query: 630 PTIQPSTICT 659
P I + +CT
Sbjct: 520 P-ITTAMMCT 528
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRV--TII 296
P +RIV G A + +P+Q +R S G CG T++H + +TA+HC + ++
Sbjct: 20 PSTRIVGGTAAPKNAWPWQAQLRSAS---GFPFCGGTLVHPRFVVTASHCIDKKTPSSLR 76
Query: 297 VRAGAVNLTRPGLL----FETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFN 446
+R GA G F + I H YS +N+ +DI +I+ N
Sbjct: 77 IRLGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLA--NDIAVIELEEPARLN 128
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +3
Query: 108 RERSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGL-- 281
R P RIV+G +A +P+QLS R G + CGA+++ W LTAAHC L
Sbjct: 232 RSEKTPPLRIVNGEDAVPHSWPWQLSFRYK----GSHICGASLLTPGWALTAAHCLTLSD 287
Query: 282 -RVTIIVRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQ 458
+ AGA G +F +K H +S V +D+ L+ ++ +D +
Sbjct: 288 DASDYTLVAGAHQRENDGQVFGISKIRKHKGFS---MVHVRNDVALLKLSTYVQLSDKVG 344
Query: 459 PIRL 470
I L
Sbjct: 345 TICL 348
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 50.4 bits (115), Expect = 1e-06
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNA--CGATIIHSNWGLTAAHCT---------- 275
RI G ++ G +P+Q+++ + N CG T+I +W LTAAHC
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSGIPYH 1219
Query: 276 GLRVTIIVR-AGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDY 452
GLRV + V A ++ + + +HP +S DI LI K +Y
Sbjct: 1220 GLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRFSWR---TYDSDIALIRLRWKANITEY 1276
Query: 453 IQPIRLQRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAY 620
++P+ L + + V GWG T S + L + +++ C AY
Sbjct: 1277 VRPVCLPNGYQRRLVKPRAKGVMLGWGVTENKRPS-KTLKEAIVPVVNHNACKKAY 1331
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.0 bits (114), Expect = 2e-06
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 4/181 (2%)
Frame = +3
Query: 126 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIVRA 305
GSRIV G EA +P+Q + + + G CG ++I W LTAAHC
Sbjct: 27 GSRIVGGTEAPINGWPWQAML--LRSPNGDQFCGGSLIDPGWVLTAAHCLVGEQPDSALL 84
Query: 306 GAVNLTRPGLLFE----TTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQ 473
GA + + E + I H Y + + +DI L+ + + + L
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMA--NDIALLKLENPANLVNGVGTVCLA 142
Query: 474 RSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNFSPTIQPSTI 653
+ + + +GWG +G A+P+ L + +S RC N++ I S +
Sbjct: 143 NNNTHLPVDEFGKCYITGWGSLSSGGAAPDRLMQASVPLVSKSRCDTG-NYTGKIHESML 201
Query: 654 C 656
C
Sbjct: 202 C 202
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 50.0 bits (114), Expect = 2e-06
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 9/181 (4%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC----TGLRVT 290
P SRIV G EA +P+Q+ I + + + CG ++I W LT++HC +
Sbjct: 242 PESRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQ 301
Query: 291 IIVRAGAVNLTR-PGL--LFETTKYINHPEYSENLNVVQP--HDIGLIDFGRKLEFNDYI 455
+R G ++ + G + + K HP +++ P +D+ LI R F+ +
Sbjct: 302 FEIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVVG-DLISPGDYDVALIKLKRPAVFHKCV 360
Query: 456 QPIRLQRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNFSPT 635
+ L S + + +GWG+T GS LN V ++ +S C +++ T
Sbjct: 361 YSVCLP-SVTANLT-TGTKCYVTGWGKTAEGSPYSLVLNEVEVDIVSKEVCNANDSYNGT 418
Query: 636 I 638
I
Sbjct: 419 I 419
Score = 34.3 bits (75), Expect = 0.089
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Frame = +3
Query: 222 CGATIIHSNWGLTAAHCT--------GLRVTIIVRAGAVNLTRPGLLFETTKYINHPEYS 377
CG +II +W +TA HC G RV + + + HP +
Sbjct: 10 CGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHPGFV 69
Query: 378 ENLNVVQP--HDIGLIDFGRKLEFNDYIQPIRLQRSADKDRNYDNVRL-VASGWGRT 539
V P +DI L+ + ++F+D IQPI L + D + ++ +GWG T
Sbjct: 70 IG-GVSHPGYYDIALLHLAKPIQFSDRIQPICLPQD---DTEFPAGKMCYLTGWGET 122
Score = 33.9 bits (74), Expect = 0.12
Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 11/163 (6%)
Frame = +3
Query: 168 FPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIV-------RAGAVN-LT 323
F Y + +V G + CG ++I W +T+ HC R + R G T
Sbjct: 544 FLYHAQVDLVVN-GTRHNCGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHREST 602
Query: 324 RPGL--LFETTKYINHPEYS-ENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQRSADKDR 494
G + + K HP+Y L+ +DI L+ R F + + L +
Sbjct: 603 TEGWEEIIKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLPEKSWSPP 662
Query: 495 NYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYN 623
D +GWGRT + L + +S C +Y+
Sbjct: 663 --DGAGCYVTGWGRTAENEGYSDVLREAQVRLVSRDTCNASYS 703
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +3
Query: 198 STVGGVNACGATIIHSNWGLTAAHC-----TGLRVTIIVRAGAVNLTRPGLLFETTKYIN 362
+T+ G + CG +++ S W LTAAHC T+IV GA G + + +
Sbjct: 332 ATLNGHHICGGSLLSSTWVLTAAHCVIRSHNTSDYTVIV--GAHKRVLDGTEHKLSAFYK 389
Query: 363 HPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQRSADKDRNYDNVRLVASGWGR 536
H +Y + + HD+ LI + F+ + P+ L + D N N +GWGR
Sbjct: 390 HEKYVGGKD--KKHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKN--CYTTGWGR 443
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +3
Query: 114 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLR--- 284
R G+RI++G A +P+Q+S+R S G + CG ++I W +TAAHC
Sbjct: 99 RKPAGARIINGQNAQPHSWPWQISLRGRS---GFHTCGGSLISDRWVVTAAHCIHRNKNP 155
Query: 285 --VTIIVRAGAV-NLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFN 446
T++V A T ++ I HP+Y++ V +DI L++ ++F+
Sbjct: 156 GGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIV---NDIALLELATPVQFD 209
Score = 39.9 bits (89), Expect = 0.002
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 13/182 (7%)
Frame = +3
Query: 114 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAH------CT 275
R G+RI++G A +P+Q+S+R S G + CG ++I W +TAA
Sbjct: 422 RKPAGARIINGQNAQPHSWPWQISLRGRS---GFHTCGGSLISDRWVVTAAQGIHRNKNP 478
Query: 276 GLR-----VTIIVRAGAV-NLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKL 437
G R T++V A T ++ I HP+Y++ V +DI L++ +
Sbjct: 479 GGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIV---NDIALLELATPV 535
Query: 438 EFNDYIQPIRLQRSADKDRNYDNVRLVASGWGR-TWTGSASPENLNWVFLNGISNLRCMV 614
+F D + D+ R R +GWG SP+ L L S+ C
Sbjct: 536 QF-DSAGKVGTVCLTDQ-RPAPGKRCYITGWGAINGDTQQSPDILQQAMLPIASHENCRR 593
Query: 615 AY 620
Y
Sbjct: 594 KY 595
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 126 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
G+RIV G EA +P+Q +R + GG CG ++IH W LTAAHC
Sbjct: 257 GTRIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 126 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
G+RIV G EA +P+Q +R + GG CG ++IH W LTAAHC
Sbjct: 217 GTRIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHC 262
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 48.8 bits (111), Expect = 4e-06
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC--TGLRVTIIVR 302
SR+VSG +A+ G++P+Q + V+ G V CG ++I W LTA HC T V
Sbjct: 60 SRVVSGDDATLGEWPWQAWLH-VTPHGFV--CGGSLIAPQWVLTAGHCILTEDPEKYRVV 116
Query: 303 AGAVNL-TRPG--LLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQ 473
G V+ T G +F + I HP YS +V +D+ L+ R ++ + L
Sbjct: 117 LGDVDRDTTEGSEQIFHVRRIIKHPHYSR--DVPYDNDVALLQLSRPAFVTSFVNTVCLP 174
Query: 474 RSADK---DRN 497
+K DRN
Sbjct: 175 AQEEKVPEDRN 185
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 48.0 bits (109), Expect = 7e-06
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 6/179 (3%)
Frame = +3
Query: 21 IWTVVIFLVAFVGGQALADDTDFTFPEIARERSLPGSRIVSGWEASEGQFPYQLSIRMVS 200
I T + F + FV QA + + + +RS+ R+VSG E +P+Q+ +
Sbjct: 6 ILTFLGFCLIFVNVQARSARSIDIDSDKCGQRSILEKRVVSGSEVEPQSWPWQVHLLQSR 65
Query: 201 TVGGVNACGATIIHSNWGLTAAHCTGLRVTII---VRAGAVN--LTRP-GLLFETTKYIN 362
++ CG +I W +TAAHC + V G N + P F+ +
Sbjct: 66 DGSFLHKCGGALIDREWVVTAAHCVFQEPDVSHYKVILGDFNRDIKEPTEQEFDVSTLHL 125
Query: 363 HPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQRSADKDRNYDNVRLVASGWGRT 539
H + + +DI L+ R N++++ + L A R + +GWG+T
Sbjct: 126 HQRFLTDKG--YGYDIALLKLSRPAVINEFVRTVCL--PAQGSRALEGTMCFITGWGKT 180
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 48.0 bits (109), Expect = 7e-06
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Frame = +3
Query: 36 IFLVAFVGGQALADDTDFTFPEIARERSLPGSRI----VSGWEA----SEGQFPYQLSIR 191
+F+ V G+++ + T T+ ++ + +PG R+ +S A S+ +P+Q+++
Sbjct: 1200 VFVRLVVSGRSVTEVT-MTYEHVSLTK-IPGKRLKDVNLSALAACGVRSDDSWPWQVALT 1257
Query: 192 MVSTVGGVNACGATIIHSNWGLTAAHC---TGLRVTIIVRAGAVNLTR---PGLLFETTK 353
+ V CG +I ++W LTAAHC + V+ G ++ R G
Sbjct: 1258 LSGNP--VQRCGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKA 1315
Query: 354 YINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQRSADKDRNYDNVRLVASGWG 533
HP+Y+ + + HD+ ++ + EFN + PI + A+++ VA GWG
Sbjct: 1316 IFVHPQYNSSSH---EHDLAVLQLQQPAEFNSRVSPICI--VANEEVQAGRACAVA-GWG 1369
Query: 534 RTW 542
+++
Sbjct: 1370 QSY 1372
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 47.6 bits (108), Expect = 9e-06
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 5/175 (2%)
Frame = +3
Query: 99 EIARERSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-- 272
E +P +R++SG EA G++P+Q + + T G + CG +++ W LTAAHC
Sbjct: 20 ETCGRAEVPATRVISGSEALLGEWPWQAWLHLQHT-GFI--CGGSLVAPGWVLTAAHCIL 76
Query: 273 ---TGLRVTIIVRAGAVNLTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEF 443
++ + + + I H Y+ V +D+ L+
Sbjct: 77 SDDASKYKVVLGDVDRKKIEGSEQMIDVAMVIKH--YAYGNPVPNANDVALLKLRDYPTK 134
Query: 444 NDYIQPIRLQRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRC 608
D++ + L + D + + +GWGR++ + L L +SN C
Sbjct: 135 TDFVNTVCLPQYMDHVEIGKDCFI--TGWGRSYYPGPTANKLQQADLRVVSNRAC 187
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 47.2 bits (107), Expect = 1e-05
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 11/182 (6%)
Frame = +3
Query: 111 ERSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVT 290
E + P RIV G EAS +P+Q+ + +V+ G + CG ++I W +T+ HC R
Sbjct: 242 ENNKPQPRIVGGREASPNSWPWQVDL-VVN--GTRHNCGGSLIDKQWVVTSGHCFDQRPY 298
Query: 291 IIV-------RAGA-VNLTRPGL--LFETTKYINHPEYS-ENLNVVQPHDIGLIDFGRKL 437
+ R G T G + + K HP+Y L+ +DI L+ R
Sbjct: 299 AYIPLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPA 358
Query: 438 EFNDYIQPIRLQRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVA 617
F + + L + D +GWGRT + L + +S C +
Sbjct: 359 VFYKRVHSVCLPEKSWSPP--DGAGCYVTGWGRTAENEGYSDVLREAQVRLVSRDTCNAS 416
Query: 618 YN 623
Y+
Sbjct: 417 YS 418
Score = 33.5 bits (73), Expect = 0.16
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Frame = +3
Query: 222 CGATIIHSNWGLTAAHC----TGLRVTIIVRAGAVNLTR-PGL--LFETTKYINHPEYSE 380
CG ++I W LT++HC + +R G + R G + + + HP
Sbjct: 15 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLYIHPGLVV 74
Query: 381 NLNVVQP--HDIGLIDFGRKLEFNDYIQPIRLQRSADKDRNYDNVRLVASGWGRTWTGSA 554
+++ P +D+ LI R F+ + + L S + + +GWG+T GS
Sbjct: 75 G-DLISPGDYDVALIKLKRPAVFHKRVHSVCLP-SVTANLT-TGTKCFVTGWGKTAEGSP 131
Query: 555 SPENLNWVFLNGISNLRCMVAYNFSPTIQPSTIC 656
LN + ++ +S C +++ TI C
Sbjct: 132 YSPVLNELEVDIVSKEVCNANDSYNGTINDRYFC 165
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 47.2 bits (107), Expect = 1e-05
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 6/181 (3%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-TGLRVTIIVRAG 308
RI+ G ++ Q P+ +++ + S ACG +++ +W +TAAHC R+ V AG
Sbjct: 40 RIMGGQRSTIEQHPWMVAMMLDSA----QACGGSLVPEDWIVTAAHCFDSNRLRWRVVAG 95
Query: 309 AVNLTRPGLLFETTKYINHPEYSENLNVVQ----PHDIGLIDFGRKLEFNDYIQPIRL-Q 473
++ + HP+Y N+ ++ +D+ L+ + + PI L
Sbjct: 96 NDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTVPICLVP 155
Query: 474 RSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNFSPTIQPSTI 653
R +D D +GWGR G L V ++ + C A ++ I +
Sbjct: 156 RDTPRDLKRD---CYVAGWGRRSFGGEQSLALREVQVHMVPRELCNSANSYGGVIHERAL 212
Query: 654 C 656
C
Sbjct: 213 C 213
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIVR 302
P +RIV G A + +P+Q +R T G CG ++IH W LTA HC + +
Sbjct: 50 PHTRIVGGTAAKQNSWPWQAQLR---TTSGFPYCGGSLIHPQWILTATHCVSGKSASSIV 106
Query: 303 AGAVNL 320
VNL
Sbjct: 107 IRNVNL 112
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 46.8 bits (106), Expect = 2e-05
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 2/177 (1%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC-TGLRVTIIVRAG 308
RIV G EA+ G +P+Q+++ M G CG ++++ NW +TA HC L ++ +
Sbjct: 53 RIVGGVEAAPGAWPWQVALLM----NGTQFCGGSLVNENWVVTARHCFHELWSSMDTASW 108
Query: 309 AVNLTRPGLLFETTKYINHPEYSENLNVVQPHD-IGLIDFGRKLEFNDYIQPIRLQRSAD 485
+L L+ T++ S L+ Q I L+ + + ++Y+ PI L D
Sbjct: 109 TASLGEHHLV--TSEGFEQSSRSNALSFTQRTTWITLLRLAKPAKLDEYVSPICL--LPD 164
Query: 486 KDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNFSPTIQPSTIC 656
+GWG+T P+ + + + C +++ +I +C
Sbjct: 165 GFEFPWAKECYITGWGKTEFEGTKPQVIREATVKLVPPEICNQVESYNGSIHVRALC 221
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTG-----LRVTI 293
SR++ G +A G +P+Q++++ G CG +++ S W +TAAHC + I
Sbjct: 475 SRVIGGKDAIPGAWPWQIALKS----RGNFICGGSLVSSTWVVTAAHCVARSSNPAQYQI 530
Query: 294 IVRAGAVNLTR-PGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRL 470
IV N+ K I HP+Y+ N +DI LI+ + + + P+ L
Sbjct: 531 IVGEHNRNVNEVTEETLNVKKVIAHPQYN---NPRLSNDIALIELASPAKLSSRVNPVCL 587
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +3
Query: 126 GSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
G+R++ G +A+ +P+Q+S+R V G + CG T+I +W LTA HC
Sbjct: 433 GARVIGGEDAAPHSWPWQISLR----VRGKHMCGGTLISPDWVLTAGHC 477
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 114 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
R G+RI++G A +P+Q+S+R + CG +I W +TA+HC
Sbjct: 839 RKPAGARIINGQNAQPHSWPWQISLRQGRRF---HLCGGALISDRWVVTASHC 888
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 114 RSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
R P SR++ G A +P+Q+S+ M G +++CG +I S W +TAAHC
Sbjct: 470 RRPPMSRVIGGEAARPYSWPWQVSVSM----GKLHSCGGALISSKWVITAAHC 518
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 45.2 bits (102), Expect = 5e-05
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 8/158 (5%)
Frame = +3
Query: 108 RERSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC---TG 278
R+ S RIV G EA G +P+ +I V G CG +I +W +TAAHC G
Sbjct: 715 RDSSDKRFRIVGGREAKAGAWPWLAAIY----VKGSFRCGGALIARDWVVTAAHCFYYDG 770
Query: 279 LRV--TIIVRAGAVNLTRPGLLFETTKYIN---HPEYSENLNVVQPHDIGLIDFGRKLEF 443
V I+VR G + T + + N HP ++N D+ LI ++
Sbjct: 771 KIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLANKN---GLDFDVALIQLKGGVKL 827
Query: 444 NDYIQPIRLQRSADKDRNYDNVRLVASGWGRTWTGSAS 557
Y++ + L + D + +GWG T G AS
Sbjct: 828 TAYVRTVCLPQPTDAILVRPGSVGIVAGWGSTQKGDAS 865
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGG-VNACGATIIHSNWGLTAAHC 272
+RIV G EA G +P+Q+ I G + CG +I+ W LTAAHC
Sbjct: 125 ARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 44.0 bits (99), Expect = 1e-04
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 5/167 (2%)
Frame = +3
Query: 123 PGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRV---TI 293
P SRI+ G A+ +P+Q I + + CG T+I + W +TAAHC +
Sbjct: 281 PMSRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQNIEPSNY 340
Query: 294 IVRAGAVN--LTRPGLLFETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIR 467
++ GA + + L T H + + + +DI ++ I P
Sbjct: 341 KIKLGAHDRESSEGALTIPVTAIHMHTRFMTDGS--YGYDIAIMKLANPAPIGHTISPAC 398
Query: 468 LQRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRC 608
L D+ + +GWG T G+A L + +S+ C
Sbjct: 399 LPGLYDQVTS--GTMCYVTGWGMTEYGNAGARLLQQARIPVVSSEEC 443
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
SR+V+G A + +P+Q+S+R G + CG ++I W LTAAHC
Sbjct: 36 SRVVNGANAPQHAWPWQISLR----TNGQHICGGSLITPEWVLTAAHC 79
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 41.5 bits (93), Expect = 6e-04
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 15/202 (7%)
Frame = +3
Query: 96 PEIARERSLPGSRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC- 272
P I R+ G RIV G A +P+Q ++ + CG ++I+ W +TAAHC
Sbjct: 421 PFICGVRNALG-RIVGGQTAKVEDWPWQAGLK--KGLDDTIVCGGSLINREWVVTAAHCI 477
Query: 273 -------TGLRV---TIIVRAGAVNLTR---PGLLFETTKYINHPEYSENLNVVQPHDIG 413
TG V I V G ++T+ + + + HP+Y E + +D+
Sbjct: 478 DRNNPSRTGCVVPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHE---IKLTNDLA 534
Query: 414 LIDFGRKL-EFNDYIQPIRLQRSADKDRNYDNVRLVASGWGRTWTGSASPENLNWVFLNG 590
LI + F +++P+ L SA D +G+GR L +
Sbjct: 535 LIRLRTPITTFTKHVRPVCLPTSATPDLAV-GTNCTVTGYGRVGENEDLSTQLRHATIPV 593
Query: 591 ISNLRCMVAYNFSPTIQPSTIC 656
+S C Y+ TI IC
Sbjct: 594 LSVSECRANYS-GHTINDKVIC 614
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
RIV G E++ G +P+Q ++ + T + CG ++I S W +TAAHC
Sbjct: 26 RIVGGIESANGAWPWQAALFLNGTH---HRCGGSVIKSQWVVTAAHC 69
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHCTGLRVTIIVRAGA 311
+IV G G +P+Q+ I T+G + CG +I++S W +TAAHC + R
Sbjct: 1782 QIVGGKVTEHGAWPWQVQIGY-KTMGHI--CGGSIVNSQWIVTAAHCVTTKPPGASRYTM 1838
Query: 312 VNLTRPGLLFETTKYINHPEYSENLN----VVQP------HDIGLIDFGRKLEFNDYIQP 461
+ + + +N+ VV P +DI L+ + + FN Y+
Sbjct: 1839 YAFSDLNVTLGEHQLYQLDGSEQNIPIEGIVVHPSYNDLDYDIALLKLRQPITFNAYVSQ 1898
Query: 462 IRLQRSADKDRNYDNVRLVASGWGRTWTGSASP 560
+ L ++A SGWGR G +SP
Sbjct: 1899 VCLPQAA----LLAGTPCYVSGWGR--IGESSP 1925
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 129 SRIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
S I+ G +A+ G++P+Q+S+ + G V CG T++ S W LTAA C
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTH-YGPV--CGGTLLTSEWVLTAARC 300
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 339 FETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQRSA-DKDRNYDNVRL 515
++ Y HP YS + DI LI + + F DY++PI L +A D + NV
Sbjct: 191 YDAEMYKIHPHYSPDS---YDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSG 247
Query: 516 VASGWGR 536
SGWG+
Sbjct: 248 TISGWGK 254
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +3
Query: 342 ETTKYINHPEYSENLNVVQPHDIGLIDFGRKLEFNDYIQPIRLQRSADKDRNYDNVRLVA 521
+ +K I HP Y + + + HDI L+ + N+ + + L + D
Sbjct: 186 KVSKVILHPSYGKPVTLA--HDIALLKLEKSATVNNNVHTVCLPFNGPAPS--DCTHCWI 241
Query: 522 SGWGRTWTGSASPENLNWVFLNGISNLRCMVAY 620
+GWG +G +P+ L + +S RC AY
Sbjct: 242 TGWGHLASGGDTPDLLQQASVPIVSRSRCDKAY 274
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 132 RIVSGWEASEGQFPYQLSIRMVSTVGGVNACGATIIHSNWGLTAAHC 272
RIV G +SEG +P+Q+++ + C ++I + W +TA HC
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLNDR----QVCAGSLIEARWIITAGHC 95
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 278 TGAVSSCKPPVAMNDGGSAGVDSSHSTDHTNRELVRELAFTRLPS 144
T A+ P +AM G S GV+ + ++ + R +++TRLPS
Sbjct: 1004 TAAIIQQDPAIAMAQGTSYGVEKASEVENEMTSVERVISYTRLPS 1048
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 79 TPISLSLKSLASVPCRVLELYQDGRRVKASSL--TSSRFVWSVLWEESTPAEPPSFIATG 252
TP+ +S +P +VL LY+ K+S L +SS + S L++ S P + S +
Sbjct: 564 TPLQVSTPLQVLIPLQVLPLYKSSALYKSSPLYKSSSLYKSSPLYKSSPPYKSSSLYKSS 623
Query: 253 GL 258
L
Sbjct: 624 SL 625
>SB_569| Best HMM Match : Big_1 (HMM E-Value=1.1)
Length = 256
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 43 WWRSSGVRRSPTTPISLSLKSLASVP 120
+WR SG R P P+SLSL S P
Sbjct: 228 FWRHSGERHKPEPPLSLSLTSRQKEP 253
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 453 IQPIRLQRSADK-DRNYDNVRLVASGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNFS 629
I IRL +D+ + R +GWG+ + ++P+ L + + RCM AY
Sbjct: 429 IDDIRLTSCSDQVPEPKEGDRCYITGWGKLSSHGSAPDILQQATVPVVGRARCMKAYR-- 486
Query: 630 PTIQPSTIC 656
I S +C
Sbjct: 487 GQIHESMLC 495
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 248 VAMNDGGSAGVDSSHSTDHTNRELVRELAFTRLPS 144
+AM G S GV+ + ++ + R +++TRLPS
Sbjct: 779 IAMAQGTSYGVEKASEVENEMTSVERVISYTRLPS 813
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 522 SGWGRTWTGSASPENLNWVFLNGISNLRCMVAYNFSPTIQPSTIC 656
+GWGR +G ++P+ L V + S RC +Y I S IC
Sbjct: 29 TGWGRLSSGGSTPDYLQQVSVPIRSRARCDSSY--PNKIHDSMIC 71
>SB_58889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 238 MMVAPQALTPPTVLTIRIESW 176
+M +P TPPTV TIR ES+
Sbjct: 41 VMTSPPQATPPTVRTIRPESY 61
>SB_44697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 27.9 bits (59), Expect = 7.7
Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = -3
Query: 344 LEKQAGTGQVHCSSSDDDCYTQTGAVSSCKPPVAMNDGGSAGVDSSHSTDHTNRELVREL 165
LEK+ CS+S D T + C PV++ G S HS +T + L
Sbjct: 312 LEKELNNASP-CSTSLGDSLTSLSIATMCSAPVSI-----PGTGSPHS--YTPQSPTSPL 363
Query: 164 AFTRLPS*YNSRTRQGTL-ASDF-RESEIGVVGERLTPDERHQKYHNSPDCHFSYD 3
+ S Y S+ + AS F R S G + + LT + K NSP H D
Sbjct: 364 G--QYTSSYGSQKQANPYRASSFVRSSLHGSIFDPLTTQLQSPKSLNSPQLHSPLD 417
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,162,512
Number of Sequences: 59808
Number of extensions: 408022
Number of successful extensions: 1253
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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