Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10e12r
         (661 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2) ...    32   0.39 
At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1) ...    31   0.51 
At4g30420.1 68417.m04321 nodulin MtN21 family protein similar to...    31   0.51 
At2g20780.1 68415.m02442 mannitol transporter, putative similar ...    29   2.7  
At5g41190.1 68418.m05006 expressed protein  ; expression support...    28   4.8  
At4g11200.1 68417.m01813 hypothetical protein contains weak hit ...    28   6.3  
At3g13050.1 68416.m01626 transporter-related low similarity to a...    28   6.3  
At1g76430.1 68414.m08885 phosphate transporter family protein si...    28   6.3  
At5g46130.1 68418.m05673 hypothetical protein contains Pfam prof...    27   8.4  
At4g37510.1 68417.m05307 ribonuclease III family protein contain...    27   8.4  

>At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2)
           identical to inorganic phosphate transporter
           [Arabidopsis thaliana] GI:2780348
          Length = 524

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 469 FCVLVDLFPTNLRVMAAALSLTAGRGGGLIGNLSFGY 359
           F V  ++FP  LR     +S  AG+ G +IG   F Y
Sbjct: 425 FIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLY 461


>At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1)
           (PT1) identical to inorganic phosphate transporter
           [Arabidopsis thaliana] GI:2258116
          Length = 524

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 469 FCVLVDLFPTNLRVMAAALSLTAGRGGGLIGNLSFGY 359
           F V  ++FP  LR     +S  AG+ G ++G   F Y
Sbjct: 425 FIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLY 461


>At4g30420.1 68417.m04321 nodulin MtN21 family protein similar to
           MtN21 [Medicago truncatula] GI:2598575; contains Pfam
           profile PF00892: Integral membrane protein
          Length = 373

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = -1

Query: 622 VHKLGAKFFLIFSLSFAGVVTVGLYYVQNSIQNLVLSCIFEALTSLAISLVFCVLVDLFP 443
           VH L  + F+++  +FA +      Y+      + +S    +L   + SL+F V +    
Sbjct: 22  VHGLSPRVFILYRQAFATIFIFPFLYLSRRKSKIAIS----SLDLKSFSLIFLVSLIGIT 77

Query: 442 TNLRVMAAALSLTAGRGGGLIGNL 371
            N  +    L LT+   G  +GN+
Sbjct: 78  INQNLYLEGLYLTSSSMGSAVGNI 101


>At2g20780.1 68415.m02442 mannitol transporter, putative similar to 
           mannitol transporter [Apium graveolens var. dulce]
           GI:12004316; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 526

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -1

Query: 601 FFLIFSLSFAGVVTVGLYYVQNSIQNLVLSCIFEALTSLAISLVFCVLV-DLFPTNLRVM 425
           F L F+L+F G  T+G+         L+  C   A  S+ +  V  VL  ++FP  LR  
Sbjct: 381 FCLSFTLTFLGQGTLGITLA------LLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQ 434

Query: 424 AAALSLTAGR 395
           A+AL     R
Sbjct: 435 ASALGAVGNR 444


>At5g41190.1 68418.m05006 expressed protein  ; expression supported
           by MPSS
          Length = 602

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 387 PPPRPAVSDNAAAITLRFVGN-RSTSTQNTRLMASEVRASKIQDSTKFWMEFCT 545
           PP +P V+D A A  L  VGN +ST   +  ++ +       Q  T F  +F T
Sbjct: 17  PPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLTNFADKFVT 70


>At4g11200.1 68417.m01813 hypothetical protein contains weak hit to
           Pfam profile PF03108: MuDR family transposase
          Length = 462

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 548 VQTDCHHSGETQTEN 592
           V+  CHHSGE +TEN
Sbjct: 116 VRVKCHHSGEFKTEN 130


>At3g13050.1 68416.m01626 transporter-related low similarity to
           apical organic cation transporter [Sus scrofa]
           GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
           {Rattus norvegicus}; contains Pfam profile PF00083:
           major facilitator superfamily protein
          Length = 500

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/81 (23%), Positives = 35/81 (43%)
 Frame = -1

Query: 622 VHKLGAKFFLIFSLSFAGVVTVGLYYVQNSIQNLVLSCIFEALTSLAISLVFCVLVDLFP 443
           V +LG K  +   L    +  + L   Q+     VL        S A ++V+    +++P
Sbjct: 361 VDRLGRKASMASMLFTCCIFLLPLLSHQSPFITTVLLFGGRICISAAFTVVYIYAPEIYP 420

Query: 442 TNLRVMAAALSLTAGRGGGLI 380
           T +R     +  + GR GG++
Sbjct: 421 TAVRTTGVGVGSSVGRIGGIL 441


>At1g76430.1 68414.m08885 phosphate transporter family protein
           similar to phosphate transporters from [Catharanthus
           roseus] GI:2208908 and [Nicotiana tabacum] GI:12641853,
           transmembrane protein [Solanum tuberosum] GI:17065936;
           contains Pfam profile: PF00083 major facilitator
           superfamily protein
          Length = 532

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 469 FCVLVDLFPTNLRVMAAALSLTAGRGGGLIGNLSF 365
           F +  +LFP   R     +S  AG+ G ++G + F
Sbjct: 425 FIIPAELFPARFRSTCHGISGAAGKFGAIVGTVGF 459


>At5g46130.1 68418.m05673 hypothetical protein contains Pfam profile
           PF03478: Protein of unknown function (DUF295)
          Length = 376

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 41  WLCSFFLKFNKKHRILYHTVN 103
           W+CSF L F +K    YH ++
Sbjct: 208 WMCSFGLNFKEKDEPTYHIID 228


>At4g37510.1 68417.m05307 ribonuclease III family protein contains
           Pfam profile PF00636 RNase3 domain
          Length = 537

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/58 (29%), Positives = 33/58 (56%)
 Frame = +3

Query: 363 PNERFPIRPPPRPAVSDNAAAITLRFVGNRSTSTQNTRLMASEVRASKIQDSTKFWME 536
           P +RF +RPP    + D   A   RF+ +   S ++  L++S + +SK+ ++ K W++
Sbjct: 87  PPKRFILRPP----LDDKKLAE--RFLNSPQLSLKSFPLLSSCLPSSKLNNADKTWID 138


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,474,511
Number of Sequences: 28952
Number of extensions: 265733
Number of successful extensions: 768
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)