Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e12f
(581 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13050.1 68416.m01626 transporter-related low similarity to a... 66 2e-11
At5g13740.1 68418.m01599 sugar transporter family protein contai... 36 0.026
At3g43790.3 68416.m04680 transporter-related low similarity to S... 36 0.026
At3g43790.2 68416.m04679 transporter-related low similarity to S... 36 0.026
At3g43790.1 68416.m04678 transporter-related low similarity to S... 36 0.026
At4g08878.1 68417.m01463 inorganic phosphate transporter, putati... 34 0.079
At5g43340.1 68418.m05298 inorganic phosphate transporter identic... 33 0.11
At5g43360.1 68418.m05300 inorganic phosphate transporter (PHT3) ... 31 0.42
At5g17010.1 68418.m01992 sugar transporter family protein simila... 31 0.42
At5g16150.3 68418.m01888 hexose transporter, putative strong sim... 31 0.56
At5g16150.2 68418.m01887 hexose transporter, putative strong sim... 31 0.56
At5g16150.1 68418.m01886 hexose transporter, putative strong sim... 31 0.56
At3g03090.1 68416.m00305 sugar transporter family protein simila... 30 0.98
At5g13750.1 68418.m01600 transporter-related 30 1.3
At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2) ... 29 2.3
At4g35300.2 68417.m05018 transporter-related low similarity to h... 29 2.3
At4g35300.1 68417.m05017 transporter-related low similarity to h... 29 2.3
At3g50060.1 68416.m05473 myb family transcription factor contain... 29 2.3
At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1) ... 29 3.0
At5g13750.2 68418.m01601 transporter-related 29 3.0
At5g64540.1 68418.m08111 hypothetical protein 28 4.0
At5g19480.1 68418.m02321 expressed protein 28 5.2
At4g30200.3 68417.m04295 expressed protein contains weak similar... 28 5.2
At4g30200.2 68417.m04294 expressed protein contains weak similar... 28 5.2
At4g30200.1 68417.m04293 expressed protein contains weak similar... 28 5.2
At4g11960.1 68417.m01904 expressed protein hypothetical protein ... 28 5.2
At4g22890.3 68417.m03307 expressed protein 27 6.9
At4g22890.2 68417.m03306 expressed protein 27 6.9
At4g22890.1 68417.m03305 expressed protein 27 6.9
At2g44840.1 68415.m05583 ethylene-responsive element-binding pro... 27 6.9
At1g25570.1 68414.m03174 leucine-rich repeat protein-related co... 27 6.9
At3g60380.1 68416.m06753 expressed protein 27 9.1
At1g21170.1 68414.m02647 expressed protein 27 9.1
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/99 (30%), Positives = 58/99 (58%)
Frame = +2
Query: 260 EAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPM 439
+ A+ A GFG+F +LA G+ + A+ + ++SFV P+ + +++ + +T+
Sbjct: 11 DEALVAMGFGKFQIYVLAYAGMGWVAEAMEMMLLSFVGPAVQSLWNLSARQESLITSVVF 70
Query: 440 LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSF 556
GM+IG+Y WG ++D GR+ + T ++ V G +S+F
Sbjct: 71 AGMLIGAYSWGIVSDKHGRRKGFIITAVVTFVAGFLSAF 109
>At5g13740.1 68418.m01599 sugar transporter family protein contains
Pfam profile PF00083: major facilitator superfamily
protein
Length = 486
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +2
Query: 416 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVSTL---LLDGVVGIISSF 556
G++ + MLG + S FWG +AD GRK ++L+ T+ + + + G+ S+F
Sbjct: 81 GFVGCSFMLGRALTSVFWGIVADRYGRKPIILLGTISIAIFNALFGLSSNF 131
>At3g43790.3 68416.m04680 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 416 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST---LLLDGVVGIISSF 556
G++ ++ M+G + S FWG LAD GRK ++L+ T ++ + + G+ +SF
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIILIGTFSVIIFNTLFGLSTSF 129
>At3g43790.2 68416.m04679 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 484
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 416 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST---LLLDGVVGIISSF 556
G++ ++ M+G + S FWG LAD GRK ++L+ T ++ + + G+ +SF
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIILIGTFSVIIFNTLFGLSTSF 129
>At3g43790.1 68416.m04678 transporter-related low similarity to
SP|P39843 Multidrug resistance protein 2
(Multidrug-efflux transporter 2) {Bacillus subtilis};
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 478
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +2
Query: 416 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST---LLLDGVVGIISSF 556
G++ ++ M+G + S FWG LAD GRK ++L+ T ++ + + G+ +SF
Sbjct: 79 GFVGSSFMIGRALTSIFWGKLADRYGRKPIILIGTFSVIIFNTLFGLSTSF 129
>At4g08878.1 68417.m01463 inorganic phosphate transporter, putative
similar to inorganic phosphate transporter (GI:3869190)
[Arabidopsis thaliana]
Length = 280
Score = 33.9 bits (74), Expect = 0.079
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 443 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISS 553
G +G F+GCL D GRK V TLL+ + I SS
Sbjct: 62 GTFLGQIFFGCLGDKLGRKRVYGLTLLIMTICSIASS 98
>At5g43340.1 68418.m05298 inorganic phosphate transporter identical
to inorganic phosphate transporter [Arabidopsis
thaliana] GI:3869190
Length = 516
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 359 VSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVV 538
+ + +P ++ + ++ G IG F+GCL D GRK V TLL+ +
Sbjct: 53 IYYQVPGSSSPGSLPDGISAAVSGVAFAGTFIGQIFFGCLGDKLGRKRVYGLTLLIMTIC 112
Query: 539 GIIS 550
I S
Sbjct: 113 SICS 116
>At5g43360.1 68418.m05300 inorganic phosphate transporter (PHT3)
identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2780347
Length = 521
Score = 31.5 bits (68), Expect = 0.42
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +2
Query: 293 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL--------TAAPML 442
+HF + + G+ + A + VS V L F TSA G L +
Sbjct: 20 YHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRLYYFNPTSAKPGSLPPHVAAAVNGVALC 79
Query: 443 GMVIGSYFWGCLADTKGRKVVLVSTLLL 526
G + G F+G L D GRK V TL++
Sbjct: 80 GTLAGQLFFGWLGDKLGRKKVYGITLIM 107
>At5g17010.1 68418.m01992 sugar transporter family protein similar
to D-xylose proton-symporter [Lactobacillus brevis]
GI:2895856; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 503
Score = 31.5 bits (68), Expect = 0.42
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 299 FCLLAVTGLIYANT--AIGITIVSFVLPSAT--CDFRMTSADKGWLTAAPMLGMVIGSYF 466
F A+ GL+Y A +S PS + + ++S D G +T+ + G + GS
Sbjct: 51 FLFPALGGLLYGYEIGATSCATISLQSPSLSGISWYNLSSVDVGLVTSGSLYGALFGSIV 110
Query: 467 WGCLADTKGRKVVLVSTLLLDGVVGIISS 553
+AD GR+ L+ LL V ++++
Sbjct: 111 AFTIADVIGRRKELILAALLYLVGALVTA 139
>At5g16150.3 68418.m01888 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 413 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFV 559
+GW+ ++ + G +GS+ G LAD GR T LD + I +F+
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGR----TRTFQLDAIPLAIGAFL 190
>At5g16150.2 68418.m01887 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 413 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFV 559
+GW+ ++ + G +GS+ G LAD GR T LD + I +F+
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGR----TRTFQLDAIPLAIGAFL 190
>At5g16150.1 68418.m01886 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 413 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFV 559
+GW+ ++ + G +GS+ G LAD GR T LD + I +F+
Sbjct: 146 QGWIVSSLLAGATVGSFTGGALADKFGR----TRTFQLDAIPLAIGAFL 190
>At3g03090.1 68416.m00305 sugar transporter family protein similar
to xylose permease [Bacillus megaterium] GI:1924928;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 503
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +2
Query: 392 FRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRK--VVLVSTLLLDG-VVGIISSFVQ 562
+ ++S D G +T+ + G +IGS +AD GR+ ++L + L L G +V +++
Sbjct: 86 YDLSSVDVGIITSGSLYGALIGSIVAFSVADIIGRRKELILAAFLYLVGAIVTVVAPVFS 145
Query: 563 ILPI 574
IL I
Sbjct: 146 ILII 149
>At5g13750.1 68418.m01600 transporter-related
Length = 478
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 416 GWLTAAPMLGMVIGSYFWGCLADTKGRK-VVLVST 517
G++ + MLG S WG +AD GRK V+L+ T
Sbjct: 80 GFVGCSFMLGRAFTSVAWGLVADRYGRKPVILIGT 114
>At5g43370.1 68418.m05301 inorganic phosphate transporter (PHT2)
identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2780348
Length = 524
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Frame = +2
Query: 293 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL---TAAPMLGMVI- 454
+HF + + G+ + A + VS V L F SA G L AA + G+ +
Sbjct: 20 YHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYFNPESAKPGSLPPHVAAAVNGVALC 79
Query: 455 ----GSYFWGCLADTKGRKVVLVSTLLL 526
G F+G L D GRK V TL++
Sbjct: 80 GTLSGQLFFGWLGDKLGRKKVYGLTLIM 107
>At4g35300.2 68417.m05018 transporter-related low similarity to
hexose transporter [Solanum tuberosum] GI:8347246;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 729
Score = 29.1 bits (62), Expect = 2.3
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 311 AVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTK 490
+V GLI A + IG T+++ TC + AD WL PML + YF G L
Sbjct: 43 SVEGLIVAMSLIGATLIT------TCSGGV--AD--WLGRRPMLILSSILYFVGSLVMLW 92
Query: 491 GRKV-VLVSTLLLDGV-VGIISSFVQI 565
V VL+ LLDG VG++ + V I
Sbjct: 93 SPNVYVLLLGRLLDGFGVGLVVTLVPI 119
>At4g35300.1 68417.m05017 transporter-related low similarity to
hexose transporter [Solanum tuberosum] GI:8347246;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 739
Score = 29.1 bits (62), Expect = 2.3
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 311 AVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTK 490
+V GLI A + IG T+++ TC + AD WL PML + YF G L
Sbjct: 43 SVEGLIVAMSLIGATLIT------TCSGGV--AD--WLGRRPMLILSSILYFVGSLVMLW 92
Query: 491 GRKV-VLVSTLLLDGV-VGIISSFVQI 565
V VL+ LLDG VG++ + V I
Sbjct: 93 SPNVYVLLLGRLLDGFGVGLVVTLVPI 119
>At3g50060.1 68416.m05473 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA MYB-related protein (1107 bp)
GI:1263096
Length = 301
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -3
Query: 546 MIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVADGST 367
M P +P+ V ++T+ P S+ Q ++PM I V QPL E+ S D T
Sbjct: 147 MSPESPNGIDVSDSSTI-PSPSSPVAQLFKPMPISGGFTVVPQPLPVEMSSSSE--DPPT 203
Query: 366 NDTIVIPMA 340
+ ++ +P A
Sbjct: 204 SLSLSLPGA 212
>At5g43350.1 68418.m05299 inorganic phosphate transporter (PHT1)
(PT1) identical to inorganic phosphate transporter
[Arabidopsis thaliana] GI:2258116
Length = 524
Score = 28.7 bits (61), Expect = 3.0
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Frame = +2
Query: 293 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL---TAAPMLGMVI- 454
+HF + + G+ + A + VS V L F SA G L AA + G+ +
Sbjct: 20 YHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYFNPESAKPGSLPPHVAAAVNGVALC 79
Query: 455 ----GSYFWGCLADTKGRKVVLVSTLLL 526
G F+G L D GRK V TL++
Sbjct: 80 GTLSGQLFFGWLGDKLGRKKVYGLTLVM 107
>At5g13750.2 68418.m01601 transporter-related
Length = 392
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 437 MLGMVIGSYFWGCLADTKGRK-VVLVST 517
MLG S WG +AD GRK V+L+ T
Sbjct: 1 MLGRAFTSVAWGLVADRYGRKPVILIGT 28
>At5g64540.1 68418.m08111 hypothetical protein
Length = 440
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 558 TNDEMIPTTPSSSRVDTNTTLRP 490
T+ +PTTPSSS+++T T+ P
Sbjct: 280 TSSHSVPTTPSSSQLNTTTSDSP 302
>At5g19480.1 68418.m02321 expressed protein
Length = 207
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 552 DEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYE 457
D++IP SSR DTN ++PFV + + +E
Sbjct: 66 DQLIPNASLSSR-DTNARIQPFVLDELKEAFE 96
>At4g30200.3 68417.m04295 expressed protein contains weak
similarities to Pfam profiles: PF00041 Fibronectin type
III domain, PF00628 PHD-finger; supporting cDNA
gi|11177136|dbj|AB050977.1|
Length = 702
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -3
Query: 555 NDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVAD 376
ND ++P PSS D N+ +AK+ ++ I I V Q + + + V D
Sbjct: 485 NDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQIEKDVEQIVLLDDEEQEAVLD 544
Query: 375 GSTNDTIVI 349
+ ++T V+
Sbjct: 545 KTESETPVV 553
>At4g30200.2 68417.m04294 expressed protein contains weak
similarities to Pfam profiles: PF00041 Fibronectin type
III domain, PF00628 PHD-finger; supporting cDNA
gi|11177136|dbj|AB050977.1|
Length = 714
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -3
Query: 555 NDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVAD 376
ND ++P PSS D N+ +AK+ ++ I I V Q + + + V D
Sbjct: 497 NDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQIEKDVEQIVLLDDEEQEAVLD 556
Query: 375 GSTNDTIVI 349
+ ++T V+
Sbjct: 557 KTESETPVV 565
>At4g30200.1 68417.m04293 expressed protein contains weak
similarities to Pfam profiles: PF00041 Fibronectin type
III domain, PF00628 PHD-finger; supporting cDNA
gi|11177136|dbj|AB050977.1|
Length = 685
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -3
Query: 555 NDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVAD 376
ND ++P PSS D N+ +AK+ ++ I I V Q + + + V D
Sbjct: 468 NDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQIEKDVEQIVLLDDEEQEAVLD 527
Query: 375 GSTNDTIVI 349
+ ++T V+
Sbjct: 528 KTESETPVV 536
>At4g11960.1 68417.m01904 expressed protein hypothetical protein
F7H19.70 - Arabidopsis thaliana, PID:e1310057
Length = 313
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 227 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 135
PFS IFTW IV ++LT+ + K +
Sbjct: 225 PFSFIFTWFAAVPAIVYLALSLTKLILKDFL 255
>At4g22890.3 68417.m03307 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 227 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 135
P+S IFTW +IV +++T+ + K +
Sbjct: 236 PYSFIFTWFAAVPVIVYLALSITKLIIKDFL 266
>At4g22890.2 68417.m03306 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 227 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 135
P+S IFTW +IV +++T+ + K +
Sbjct: 236 PYSFIFTWFAAVPVIVYLALSITKLIIKDFL 266
>At4g22890.1 68417.m03305 expressed protein
Length = 324
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 227 PFSIIFTWSFTFKIIVRYEITLTRYMAKSLV 135
P+S IFTW +IV +++T+ + K +
Sbjct: 236 PYSFIFTWFAAVPVIVYLALSITKLIIKDFL 266
>At2g44840.1 68415.m05583 ethylene-responsive element-binding
protein, putative
Length = 226
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = -3
Query: 465 KYEPMTI-PNIGA---AVSQPLSAEVMRKSHVADGSTNDTIVIP 346
KYEP+ I P + +VS L++E R+SHV DG + ++V+P
Sbjct: 156 KYEPVRIRPRRRSPEPSVSDQLTSEQKRESHVDDGES--SLVVP 197
>At1g25570.1 68414.m03174 leucine-rich repeat protein-related
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to light
repressible receptor protein kinase [Arabidopsis
thaliana] gi|1321686|emb|CAA66376
Length = 628
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -3
Query: 576 NMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVS 421
N G+ W +DE + S S + +TL Q Y PM + VS
Sbjct: 217 NFGRSWQSDEDFRSEDSRSVARSLSTLEKIKGVDQAPNYFPMKLYQTAVTVS 268
>At3g60380.1 68416.m06753 expressed protein
Length = 743
Score = 27.1 bits (57), Expect = 9.1
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = -2
Query: 493 ALCISQATPEI*TNDHTQHRRGCKPALVRRSHAEITCRRR*HERHYCDSNGGVSVDQPRD 314
+L S +PE+ ND T+ R P LV + T RR H RHY S+G + + R
Sbjct: 348 SLSPSPPSPELVPND-TRRR---SPELV----TDDTPRRASHSRHY--SDGSLLEEDVRR 397
Query: 313 RKQAKVEATETRSRNGGF 260
+ ++E ++ R R F
Sbjct: 398 GFENELEGSKVRGRKAEF 415
>At1g21170.1 68414.m02647 expressed protein
Length = 1090
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 38 RHPWSDRRDAAPYIRGGARASLSVAYGDDDK 130
+ P +R AAP +GGA+AS + +DD+
Sbjct: 44 QQPRRQKRAAAPPSKGGAKASRKPSMDEDDE 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,411,027
Number of Sequences: 28952
Number of extensions: 286127
Number of successful extensions: 779
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -