Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10e06f
         (597 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162...   238   2e-63
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315...   228   3e-60
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043...    41   9e-04
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412...    40   0.001
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081...    29   3.7  
07_03_0894 + 22362717-22363514                                         29   3.7  
03_02_0243 - 6744164-6744415,6744518-6745135                           29   3.7  
02_01_0516 + 3727742-3727936,3729115-3729192,3729292-3729552,372...    29   3.7  
03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399     28   4.9  
10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175     28   6.5  
10_02_0098 + 5286827-5287019,5287380-5287476,5287872-5287992,528...    27   8.6  
08_02_0805 + 21400345-21400701,21400797-21400975,21401223-214012...    27   8.6  
06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184...    27   8.6  
02_03_0182 + 16101861-16101955,16102226-16102372,16102465-161025...    27   8.6  
01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739...    27   8.6  
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043...    27   8.6  

>06_03_0510 -
           21615724-21615909,21615992-21616075,21616164-21616217,
           21616324-21616371,21616529-21616611,21616963-21617113,
           21617648-21617785,21617966-21618094,21618391-21618596,
           21618734-21618845,21619145-21619204,21619331-21619429,
           21619520-21619575,21620230-21620313,21621407-21621500
          Length = 527

 Score =  238 bits (583), Expect = 2e-63
 Identities = 114/152 (75%), Positives = 127/152 (83%)
 Frame = +2

Query: 140 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSG 319
           + Y+TVSGV GPLVILD+VK PK+ EIV ++L DGT R GQVLEV G KAVVQVFEGTSG
Sbjct: 59  MEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSG 118

Query: 320 IDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRI 499
           ID K T  +FTG++L+TPVS DMLGR+FNGSGKPID GPPIL E +LDI G  INP  R 
Sbjct: 119 IDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERT 178

Query: 500 YPEEMIQTGISAIDVMNSIARGQKIPIFSAAG 595
           YPEEMIQTGIS IDVMNSIARGQKIP+FSAAG
Sbjct: 179 YPEEMIQTGISTIDVMNSIARGQKIPLFSAAG 210


>01_06_0458 +
           29531069-29531126,29531247-29531302,29531407-29531505,
           29531989-29532048,29532285-29532396,29532459-29532694,
           29533092-29533220,29533325-29533462,29534043-29534193,
           29534394-29534476,29534658-29534705,29534828-29534881,
           29534971-29535054,29535152-29535337
          Length = 497

 Score =  228 bits (557), Expect = 3e-60
 Identities = 115/161 (71%), Positives = 127/161 (78%), Gaps = 9/161 (5%)
 Frame = +2

Query: 140 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSG 319
           + Y+TVSGV GPLVILD+VK PK+ EIV ++L DGT R GQVLEV G KAVVQVFEGTSG
Sbjct: 19  MEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSG 78

Query: 320 IDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQ---------G 472
           ID K T  +FTG++L+TPVS DMLGRVFNGSGKPID GPPIL E +LDI          G
Sbjct: 79  IDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYLDISDFDIGFAGAG 138

Query: 473 QPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAG 595
             INP  R YPEEMIQTGIS IDVMNSIARGQKIP+FSAAG
Sbjct: 139 SSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAG 179


>06_03_1014 -
           26902971-26903085,26903182-26903270,26904302-26904380,
           26904488-26904585,26904848-26904952,26905031-26905117,
           26905218-26905412,26905890-26905996,26906559-26906754,
           26906865-26906966,26907100-26907171,26907404-26907505,
           26907638-26907675,26907769-26907880,26907972-26908028,
           26908122-26908177,26908283-26908409,26908856-26908910,
           26908919-26909049
          Length = 640

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 24/90 (26%), Positives = 48/90 (53%)
 Frame = +2

Query: 155 VSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGIDAKN 334
           V  V+GP+V+ D +      E+V++   D  +  G+++ + G  A +QV+E T+G+   +
Sbjct: 60  VLAVSGPVVVADGMGGAAMYELVRVG-NDNLI--GEIIRLEGDSATIQVYEETAGLMVND 116

Query: 335 TLCEFTGDILRTPVSEDMLGRVFNGSGKPI 424
            +   T   L   +   +LG +F+G  +P+
Sbjct: 117 PVLR-TRKPLSVELGPGILGNIFDGIQRPL 145


>02_01_0561 +
           4120268-4120339,4121462-4121588,4121715-4121770,
           4121841-4121912,4122017-4122128,4122247-4122284,
           4122412-4122513,4122619-4122675,4122755-4122826,
           4122992-4123093,4123210-4123405,4123988-4124094,
           4124497-4124691,4124771-4124857,4124905-4124913,
           4125599-4125703,4126067-4126164,4126250-4126328,
           4126912-4127000,4127086-4127200
          Length = 629

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = +2

Query: 128 SQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFE 307
           S+    Y  V  V+GP+V+ D +      E+V++   D  +  G+++ + G  A +QV+E
Sbjct: 13  SEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVG-HDNLI--GEIIRLEGDSATIQVYE 69

Query: 308 GTSGIDAKNTLCEFTGDILRTPVSEDM----LGRVFNGSGKPI 424
            T+G+   + +      +   P+S ++    LG +F+G  +P+
Sbjct: 70  ETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPL 112


>11_08_0092 -
           28307180-28307380,28307471-28307936,28308008-28308117,
           28308206-28308493,28309024-28309059
          Length = 366

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 116 WRLPGHVPWSPGRERSPLPFF 54
           WR+ GH+P   G  R P+ FF
Sbjct: 252 WRVQGHLPQRQGPRRVPIDFF 272


>07_03_0894 + 22362717-22363514
          Length = 265

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 453 SSAKIGGPLSMGLPEPLNTRPNMSSETGVRRMSPVNSQSVFFASIPDV 310
           SSA     L+ GLP  +  R +++ E GVR +    ++S F A  P +
Sbjct: 56  SSAAKADALAAGLPRAVAVRADVADEAGVRSLFDA-AESAFGAGAPHI 102


>03_02_0243 - 6744164-6744415,6744518-6745135
          Length = 289

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -1

Query: 225 CTISENLGNLTSSKMTRGPFTPDTVL*VSLG 133
           C ++E++  L S  +T  P TPDTVL VS G
Sbjct: 23  CEVNESM--LDSVTVTHAPLTPDTVLEVSGG 51


>02_01_0516 +
           3727742-3727936,3729115-3729192,3729292-3729552,
           3729921-3730238,3730527-3730685,3730768-3730961,
           3731644-3731647
          Length = 402

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 167 NGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQV 301
           NGP+ + +  KF   ++ +  KLAD T   G    + G  +V  V
Sbjct: 321 NGPMGVFEFEKFAAGTDAIAKKLADLTTTKGATTIIGGGDSVAAV 365


>03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399
          Length = 146

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -3

Query: 454 VLGQDWGTLVDGFAGTVEHATQHVFRDRCTKNVTRELAECVLR 326
           VLGQDW  + DG    V  +  H  R RC     RE  E V R
Sbjct: 32  VLGQDWKQIEDGRRRPVAVSYSHGRRLRCIAEGRREEEEEVGR 74


>10_08_0527 - 18555231-18555882,18556334-18556463,18557073-18557175
          Length = 294

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -1

Query: 414 PEPLNTRPNMSSETGVRRMSPVNSQSVFFASIPDVPSNTWTTALEPLTSS 265
           P P    P  S  TG     P    S      PD+P  TWTT L+ +T++
Sbjct: 202 PPPPPPPPPPSDATGGEVSIPCFPFSPLPFIEPDLPELTWTTDLDDITAT 251


>10_02_0098 +
           5286827-5287019,5287380-5287476,5287872-5287992,
           5288458-5288511,5288868-5288918,5289004-5289099,
           5289709-5289807,5289989-5290111,5290666-5290809,
           5290902-5290973,5291053-5291128,5291208-5291350,
           5291453-5291561,5291629-5291816,5292045-5292134,
           5292256-5292438,5293187-5293360,5293466-5293537
          Length = 694

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -3

Query: 478 GLTLDVQEVLGQDWGTLVD--GFAGTVEHATQ 389
           G  +D+ EV+G D+G  VD  GF   +E A Q
Sbjct: 165 GYPVDLTEVMGVDYGLSVDREGFDAAMEEARQ 196


>08_02_0805 +
           21400345-21400701,21400797-21400975,21401223-21401271,
           21401310-21401390,21401988-21402605
          Length = 427

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +3

Query: 339 SASSRVTFFVHRSL--KTCWVACSTVPANPSTRVPQSWPRTSWTSRVSPS 482
           SA  R  +++ +SL  + C VA  T+P   + ++ Q  P T+W  RV+ S
Sbjct: 164 SAGDRGVWWI-KSLFGRVCLVASHTLPQFATPKLWQDSPPTNWVPRVNGS 212


>06_01_0244 -
           1844161-1844241,1844356-1844394,1844510-1844617,
           1844638-1844685,1845058-1845111,1845214-1845268,
           1845442-1845522,1846238-1846615,1847196-1847401
          Length = 349

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = -3

Query: 226 LYDLRELGELDFIQDDERTVYTRHSLVSEPGLGNEVPGDCQD 101
           +YD  E+ E +  + +E+ +   +  + EPGL  ++ GD ++
Sbjct: 299 IYDTEEMSESEDEEKEEQRIRKLYEDLEEPGLHEKLFGDVEE 340


>02_03_0182 +
           16101861-16101955,16102226-16102372,16102465-16102515,
           16102617-16102782,16103055-16103283,16104067-16104638
          Length = 419

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 121 VPGDCQDMFLGRLGVRDHLCHFSVFTYRQS 32
           + GD  D+ +GRL + DHL HF +   R S
Sbjct: 201 IAGD--DLAVGRLPINDHLVHFFLSRRRHS 228


>01_05_0655 -
           23972488-23973152,23973193-23973241,23973883-23973940,
           23974184-23974215,23975961-23976040,23976509-23977898
          Length = 757

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +2

Query: 446 AEDF---LDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAA 592
           AEDF   L + G P+ P    +P      G+S  DV  + +  +K  +  AA
Sbjct: 216 AEDFAGNLQLCGSPLPPCKSFFPSPSPSPGVSPADVPGAASSSKKRRLSGAA 267


>01_05_0627 +
           23802235-23802853,23803357-23803430,23804207-23804364,
           23804640-23804964
          Length = 391

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +3

Query: 333 THSASSRVTFFVHRSLKTCWVACSTVPANPSTRVPQSWPRTSWTSRVSPSTHGHVSTQRR 512
           T ++SSR   +  RS     VA ++ P  PST    SW           +T    ST RR
Sbjct: 67  TRTSSSRPAPWWRRSRMAAAVAVTSSPPRPSTSPRLSWSSWEADELEEAATAPRPSTSRR 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,597,401
Number of Sequences: 37544
Number of extensions: 450667
Number of successful extensions: 1329
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)