Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10e04r
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72505-7|CAA96614.1|  333|Caenorhabditis elegans Hypothetical pr...    32   0.37 
Z70780-16|CAA94829.1|  333|Caenorhabditis elegans Hypothetical p...    32   0.37 
AF098504-6|ABO52818.1|  300|Caenorhabditis elegans Serpentine re...    31   0.65 
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    28   6.1  

>Z72505-7|CAA96614.1|  333|Caenorhabditis elegans Hypothetical
           protein C50C10.1 protein.
          Length = 333

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = +3

Query: 249 ITAYLFTYKMAT*SN*YTLM*KKLDTKVEKLLCYKMYSINEGILVSKPRSEKILGLFVGT 428
           +TA L  +K+       + + +K D K EK+L   M  I   ++V  P +   + LF  +
Sbjct: 219 VTAILMFFKLLQKRKISSELHRKTDLKSEKVLTATMILILLPVVV--PATLSFVNLFAPS 276

Query: 429 KLDIYSHNYKSRCGCLSKKLHNF-CYF 506
               Y + + SRC CL  + H   CYF
Sbjct: 277 A---YPYIFLSRCICLDARAHFVSCYF 300


>Z70780-16|CAA94829.1|  333|Caenorhabditis elegans Hypothetical
           protein C50C10.1 protein.
          Length = 333

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = +3

Query: 249 ITAYLFTYKMAT*SN*YTLM*KKLDTKVEKLLCYKMYSINEGILVSKPRSEKILGLFVGT 428
           +TA L  +K+       + + +K D K EK+L   M  I   ++V  P +   + LF  +
Sbjct: 219 VTAILMFFKLLQKRKISSELHRKTDLKSEKVLTATMILILLPVVV--PATLSFVNLFAPS 276

Query: 429 KLDIYSHNYKSRCGCLSKKLHNF-CYF 506
               Y + + SRC CL  + H   CYF
Sbjct: 277 A---YPYIFLSRCICLDARAHFVSCYF 300


>AF098504-6|ABO52818.1|  300|Caenorhabditis elegans Serpentine
           receptor, class t protein61 protein.
          Length = 300

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 18/73 (24%), Positives = 32/73 (43%)
 Frame = +3

Query: 339 LLCYKMYSINEGILVSKPRSEKILGLFVGTKLDIYSHNYKSRCGCLSKKLHNFCYFCPFI 518
           L+ Y++    +  L+SK  + +I  L   T + +Y       C  L+   HN+ +  P  
Sbjct: 221 LIIYRLVKTKKRFLISKSYNAEIKVLIQATVITVY-------CTVLNVLWHNYSWMLPQN 273

Query: 519 LWKNVNIIYSWAL 557
           LW    + + W L
Sbjct: 274 LWSYTALNFMWIL 286


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 283 HKVISTHLCERNWTLKLKSYYAIKCI 360
           HKV ST+L E NW  K K +  +KC+
Sbjct: 253 HKVDSTYLSEANWEPK-KYHKNVKCV 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,759,013
Number of Sequences: 27780
Number of extensions: 362200
Number of successful extensions: 743
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)