Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e04f
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical ... 212 2e-55
AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 41 9e-04
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 31 0.71
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 31 0.71
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 1.2
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 1.2
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 1.2
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 5.0
Z82264-3|CAB05166.1| 277|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC006696-3|AAF39984.1| 391|Caenorhabditis elegans Hypothetical
protein W08E12.7 protein.
Length = 391
Score = 212 bits (517), Expect = 2e-55
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Frame = +2
Query: 62 TIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKEKDS 241
T+A D VVTKY++A +I N VL++V+A A A ++C+ GDKL+LE+T K++KKEK+
Sbjct: 22 TLANDAVVTKYQVAAEITNAVLKEVLANIKEGAIAGDLCDLGDKLILEKTGKLYKKEKNF 81
Query: 242 KKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVG-- 415
KGIA TC+S++NCICH++P+ SE +LK G + K+DLG HIDG IA AHTVVVG
Sbjct: 82 TKGIAMPTCISIDNCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVVVGAS 141
Query: 416 -ESEVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQL 592
+++V+G+ AD+ +P TEN +T+ I K +AE+G PIE MLSHQL
Sbjct: 142 KDNKVTGKLADLLRGTHDALEIAIRSLRPDTENTTITKNIDKTAAEFGLTPIENMLSHQL 201
Query: 593 KQFRIDGEKSIIQNPSEAQR 652
++ IDGEK IIQN E Q+
Sbjct: 202 ERNEIDGEKKIIQNSGEKQK 221
>AL117205-8|CAB55167.1| 444|Caenorhabditis elegans Hypothetical
protein Y116A8A.9 protein.
Length = 444
Score = 60.5 bits (140), Expect = 1e-09
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Frame = +2
Query: 38 ADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNK 217
++E++ I+ + V Y+ + + +V + V + P + EICE LE T++
Sbjct: 115 SNEEKKALDISYEEVWQDYRRSAEAHRQVRKYVKSWIKPGMTMIEICER-----LETTSR 169
Query: 218 VFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVA 397
KE+ + G+AF T S+N+C H++P A + +L+ GD+ KID G H+ G + A
Sbjct: 170 RLIKEQGLEAGLAFPTGCSLNHCAAHYTPNAGDTT-VLQYGDVCKIDYGIHVRGRLIDSA 228
Query: 398 HTVVVGES----EVSGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKP 565
TV + R A E + ++ Y KP
Sbjct: 229 FTVHFDPKFDPLVEAVREATNAGIKESGIDVRLCDVGEIVEEVMTSHEVELDGKSYVVKP 288
Query: 566 IEGMLSHQLKQFRIDGEKSI 625
I + H + Q+RI K++
Sbjct: 289 IRNLNGHSIAQYRIHAGKTV 308
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 40.7 bits (91), Expect = 9e-04
Identities = 29/109 (26%), Positives = 45/109 (41%)
Frame = +2
Query: 260 STCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRA 439
S C SVN ICH P + L+ GDL +D+ + GF + T +VG+ +V +
Sbjct: 173 SCCTSVNEVICHGIPDMRK----LENGDLCNVDVTVYHRGFHGDLNETFLVGD-KVDEES 227
Query: 440 ADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSH 586
+ KPG + + IQK + G ++G H
Sbjct: 228 RKLVKVTFECLQQAIAIVKPGVKFREIGNVIQKHANANGFSVVKGYCGH 276
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.71
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 8 FSQKSQS*EMADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFG 187
F Q+ ++ + K V K++ + +++K++L Q VL C+ A I +FG
Sbjct: 273 FRDLVQTNDIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFG 323
Query: 188 DKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDL 361
+++ L ET + ++KD SK +TC + + PI D +++ D +DL
Sbjct: 324 ERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDL 382
Query: 362 G 364
G
Sbjct: 383 G 383
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 31.1 bits (67), Expect = 0.71
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 8 FSQKSQS*EMADEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFG 187
F Q+ ++ + K V K++ + +++K++L Q VL C+ A I +FG
Sbjct: 273 FRDLVQTNDIDEVKNVSKSLYDKGLISKHEL--QSGTEVL------CMSSDGAL-IDQFG 323
Query: 188 DKLVLEETNKVFKKEKD--SKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDL 361
+++ L ET + ++KD SK +TC + + PI D +++ D +DL
Sbjct: 324 ERVYLSETTSIDLEDKDRVSKSSTRMTTCGDGAESLRYHWPIDEMLDELIEL-DSCTMDL 382
Query: 362 G 364
G
Sbjct: 383 G 383
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 234 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 97
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 234 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 97
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 372 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 414
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 234 FSFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPAN 97
F L T+ N +LSP S LA AS + + TC T+ P N
Sbjct: 400 FGLLSTIWSGGNMNLSPGS---LASASASPTSSTCDHNDHTLVPIN 442
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 176 CEFGDKLVLEETNKVFKKEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKI 355
C+FGDK + E +K+ K FS C + +P+A + + I KKG++ K+
Sbjct: 72 CKFGDKCL--EDHKIPKPGTRLCGSCRFSKCEQMG-----MNPMAIKSEIISKKGNILKM 124
Query: 356 DL-GAHIDGFIAVVAHTVVVGE 418
+L H IAV + E
Sbjct: 125 ELVKKHNRQLIAVTKEIAIDDE 146
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 499 RLQETKSRFTSMMSCQQNICSTSRDFTFTHNYCMSYNSYKSINVSTK 359
RL + S +T+ +C Q C T + T+T C+ N + +TK
Sbjct: 709 RLLSSWSEWTTTGTCNQTACGTCQTLTYTRT-CLKTNGCFCMGSATK 754
>Z82264-3|CAB05166.1| 277|Caenorhabditis elegans Hypothetical
protein C49C3.7 protein.
Length = 277
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 44 EKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVF 223
EKE+ K D++ K L+ +I N + ++ + VP+ S R+I E + L +E + +
Sbjct: 173 EKEMWKDRFNDVLSEKLALSARIRNVIGDRSESVEVPNDSNRDIWELREDLEMERSAR-R 231
Query: 224 KKEKDSK 244
K E++ K
Sbjct: 232 KAEEELK 238
>Z74033-7|CAA98472.2| 325|Caenorhabditis elegans Hypothetical
protein F38B7.4 protein.
Length = 325
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/91 (21%), Positives = 38/91 (41%)
Frame = -3
Query: 343 ISFFQNVIRFARNGRKVTNAVVHRNAC*KCNAFLGVFLLFENLVSLLQYKFIAKFTYFSC 164
++ F + +F +N K R K N +L + + ++ + L+ F F F
Sbjct: 207 VATFAKIFKFYKNQNKTDKESRKRI---KKNIYLFIQTVLQDSLYLIDISFTFYFNSFYD 263
Query: 163 *CVWNAFCDDLLKDSVHYLSC*LVLGHNQIL 71
W FC + S+H L +++ N+ L
Sbjct: 264 YRFWTFFCGTFVWQSLHSLDGFIMIMFNERL 294
>Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical
protein F22B5.6 protein.
Length = 223
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 213 LVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPANLYLV 85
++S N S I +A+ THF +TC T F +L +V
Sbjct: 57 IISWNMLNSSRGKIVNENATNTHFGLTCVTTAFLCILTSLIIV 99
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 395 AHTVVVGESEVSGRAAD 445
AH + +GESE++G AAD
Sbjct: 350 AHPIHIGESEIAGHAAD 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,435,591
Number of Sequences: 27780
Number of extensions: 299546
Number of successful extensions: 1058
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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