BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10e03r (634 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 43 2e-04 U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 38 0.005 Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 31 0.52 Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 31 0.69 Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.91 AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 31 0.91 AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 31 0.91 AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 30 1.2 U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 29 2.1 U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.1 AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 28 6.4 AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 28 6.4 Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 27 8.4 U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 27 8.4 U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 8.4 AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 8.4 >U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like protease protein 2 protein. Length = 265 Score = 43.2 bits (97), Expect = 2e-04 Identities = 41/209 (19%), Positives = 81/209 (38%), Gaps = 8/209 (3%) Frame = -1 Query: 625 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG--EISYVHFAVNHPQFSEE 452 C +L H ++ A CF + +Y ++ G +I Y+ +P + ++ Sbjct: 54 CGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLY-KD 112 Query: 451 NYDKDVSIVRVTH-AIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSASDGNLH 275 + D++I+ + + I F + GWG+ G L Sbjct: 113 IFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSM---GLRYAERLQ 169 Query: 274 KLELIVTNKENCRNQYKDHDRVVTDHKFCAGLVRDGGRDYDNTDLGAPAFFQN-----AL 110 + + N+ +C N + + + + FCAG + +GG D D G P + L Sbjct: 170 AALIPIINRFDCVNSSQIYSSM-SRSAFCAGYL-EGGIDSCQGDSGGPFACRREDGAFVL 227 Query: 109 VGIVSFGKSNSNDAYPVVLTSISSFTEWI 23 G++S+G + P + T ++ + WI Sbjct: 228 AGVISWGDGCAQKKQPGIYTMVAPYLSWI 256 >U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like protease protein 1 protein. Length = 293 Score = 38.3 bits (85), Expect = 0.005 Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 7/209 (3%) Frame = -1 Query: 628 QCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPQFS--- 458 +C G ++ L+ A CF + +Y + G RS G V HP ++ Sbjct: 83 RCGGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGG--HRSGSGSPHRVTAVSIHPWYNIGF 140 Query: 457 EENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSASDGNL 278 +YD +I+R+ ++ + GWG+T++G S S L Sbjct: 141 PSSYD--FAIMRIHPPVNTSTTARPICLPSLPAVENRLCV--VTGWGSTIEGSSLSAPTL 196 Query: 277 HKLELIVTNKENCRNQYKDHDRVVTDHKFCAGLVRDGGRDYDNTDLGAPAFFQN----AL 110 ++ + + + C + R+ CAG G D D G P L Sbjct: 197 REIHVPLLSTLFCSSLPNYIGRIHLPSMLCAG-YSYGKIDSCQGDSGGPLMCARDGHWEL 255 Query: 109 VGIVSFGKSNSNDAYPVVLTSISSFTEWI 23 G+VS+G + P V ++ S + WI Sbjct: 256 TGVVSWGIGCARPGMPGVYGNVHSASTWI 284 >Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical protein M195.2 protein. Length = 419 Score = 31.5 bits (68), Expect = 0.52 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 437 CEHRTSNTCHPLRPKYPAGCYYPTRCRNTPGYFC 336 C+ +N+C L P+ GC PT CRNT C Sbjct: 275 CQTGCANSCAQLSPQPTEGC--PTNCRNTCNEVC 306 >Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical protein ZC84.6 protein. Length = 1474 Score = 31.1 bits (67), Expect = 0.69 Identities = 18/60 (30%), Positives = 25/60 (41%) Frame = +1 Query: 64 GRRHWNCSFQKTQCLPTHFGRRQGHPSQYYRSHGHHPGPNRRRICDQSRRDHDPYTGSCS 243 G W C + C P G R PS R +H G ++ +R +DP +G CS Sbjct: 311 GSTQWCCPTVASVCGPV--GGRPLDPSVNNRGTVYHSGVEKQGTATSTRFFYDPQSGKCS 368 >Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical protein C30F2.1 protein. Length = 307 Score = 30.7 bits (66), Expect = 0.91 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 413 CHPLRPKYPAGCYYPTRCRNTPG 345 C P+RPK P G P CR PG Sbjct: 102 CEPIRPKCPPGPPGPPGCRGEPG 124 >AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical protein W05F2.4b protein. Length = 806 Score = 30.7 bits (66), Expect = 0.91 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 94 KTQCLPTHFGRRQGHPSQYYRSHGHHPGPNRRR 192 K + PT FGR Q H +Q + + + PNR R Sbjct: 390 KRRSFPTSFGRPQAHQAQQHHAPSDYEKPNRFR 422 >AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical protein W05F2.4a protein. Length = 834 Score = 30.7 bits (66), Expect = 0.91 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 94 KTQCLPTHFGRRQGHPSQYYRSHGHHPGPNRRR 192 K + PT FGR Q H +Q + + + PNR R Sbjct: 418 KRRSFPTSFGRPQAHQAQQHHAPSDYEKPNRFR 450 >AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density lipoprotein receptorrelated protein 2 protein. Length = 2192 Score = 30.3 bits (65), Expect = 1.2 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = -3 Query: 437 CEHRTS--NT-CHPLRPKYPAGCYYPTRCRNTPGY 342 CE + NT C P+ K P C+ RC +TPGY Sbjct: 1863 CEQNAAAHNTDCSPICQKQPNWCHNGGRCLDTPGY 1897 >U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical protein R04E5.8b protein. Length = 142 Score = 29.5 bits (63), Expect = 2.1 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +1 Query: 115 HFGRRQGHPSQYYRSHGHHPGPNRRRICDQSR-RDHD 222 H + H + + GHH GP R D++R R+HD Sbjct: 57 HIAPARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHD 93 >U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein R04E5.8a protein. Length = 997 Score = 29.5 bits (63), Expect = 2.1 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +1 Query: 115 HFGRRQGHPSQYYRSHGHHPGPNRRRICDQSR-RDHD 222 H + H + + GHH GP R D++R R+HD Sbjct: 901 HIAPARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHD 937 >AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-modifier protein protein. Length = 944 Score = 27.9 bits (59), Expect = 6.4 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 Query: 109 PTHFGRRQGHPSQYYRSHGHHPGPNRRRICDQSRRDH 219 P H +QG P Y HHP ++ DQ +R H Sbjct: 463 PMHHQMQQGPPRMMYMHQQHHP---MHQVEDQMQRQH 496 >AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array expression modifierprotein 1 protein. Length = 944 Score = 27.9 bits (59), Expect = 6.4 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 Query: 109 PTHFGRRQGHPSQYYRSHGHHPGPNRRRICDQSRRDH 219 P H +QG P Y HHP ++ DQ +R H Sbjct: 463 PMHHQMQQGPPRMMYMHQQHHP---MHQVEDQMQRQH 496 >Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical protein Y49E10.14 protein. Length = 335 Score = 27.5 bits (58), Expect = 8.4 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = +1 Query: 136 HPSQYYRSHGHHPGPNRRRICDQSRRDHDPYTGSCSFL 249 H + R +H NRR+IC R + Y C F+ Sbjct: 170 HHDENRRPSNNHGSSNRRQICHNFERGNCRYGPRCRFI 207 >U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. Length = 335 Score = 27.5 bits (58), Expect = 8.4 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = +1 Query: 136 HPSQYYRSHGHHPGPNRRRICDQSRRDHDPYTGSCSFL 249 H + R +H NRR+IC R + Y C F+ Sbjct: 170 HHDENRRPSNNHGSSNRRQICHNFERGNCRYGPRCRFI 207 >U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell lineage protein 13 protein. Length = 2248 Score = 27.5 bits (58), Expect = 8.4 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -1 Query: 247 ENCRNQYKDHDRVVTDHKFCAGLVRDGGRDYDNTDLGAPAFFQNALVGIVSFGKSNSND- 71 E+CR + H V + H LV G++Y+N +G + + +L I S SN+ + Sbjct: 2152 EHCRKAHVFHILVKSSHSTRGELVVTTGQEYENY-VGLKSVTRASLNSISSQRASNAGET 2210 Query: 70 AYPVVL 53 A P VL Sbjct: 2211 AQPSVL 2216 >AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger protein LIN-13 protein. Length = 2248 Score = 27.5 bits (58), Expect = 8.4 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -1 Query: 247 ENCRNQYKDHDRVVTDHKFCAGLVRDGGRDYDNTDLGAPAFFQNALVGIVSFGKSNSND- 71 E+CR + H V + H LV G++Y+N +G + + +L I S SN+ + Sbjct: 2152 EHCRKAHVFHILVKSSHSTRGELVVTTGQEYENY-VGLKSVTRASLNSISSQRASNAGET 2210 Query: 70 AYPVVL 53 A P VL Sbjct: 2211 AQPSVL 2216 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,588,371 Number of Sequences: 27780 Number of extensions: 395378 Number of successful extensions: 1107 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1077 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1106 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1395683256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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