Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e03f
(632 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.007
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.048
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.048
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.063
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.15
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 33 0.25
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 33 0.25
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.8
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.2
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 7.2
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.2
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 2/165 (1%)
Frame = +2
Query: 140 QIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISY 319
Q ++ + + W +C G ++ ++ A C Y+ + R S G ++
Sbjct: 299 QAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCVFQNIEPSNYKIKLGAHDRESSEGALTI 358
Query: 320 VHFAVN-HPQF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWG 493
A++ H +F ++ +Y D++I+++ + G + GWG
Sbjct: 359 PVTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLPGLYDQVTSGTMCYVTGWG 418
Query: 494 TTVQGGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
T + G+A L + + V + E C H +V CAG
Sbjct: 419 MT-EYGNAGARLLQQARIPVVSSEECERVNNKHRKVDKVTMLCAG 462
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +2
Query: 338 HPQFSEENYDKDVSIVRVTHAIHFGPNXX---XXXXXXXXXXXXXXXXXDLLGWGTTVQG 508
HP +S ++YD D++++R+ + F + GWG
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKLW 258
Query: 509 GSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
LH+ + + + + CR + D+ +VT + FCAG
Sbjct: 259 RDRVANRLHEATVPIVDIQTCRKAHPDY--IVTANMFCAG 296
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 8/169 (4%)
Frame = +2
Query: 146 EVFLPILNQWFQQCAGIVLTNYHYLSTATCF--HGEFYDPAYRRIIAGSSRRSE------ 301
E+ L N C G ++ Y L+++ CF + R+ RR E
Sbjct: 2 EIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEII 61
Query: 302 PGEISYVHFAVNHPQFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDL 481
G+ Y+H + D DV+++++ F +
Sbjct: 62 QGDQLYIHPGLVVGDLISPG-DYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFV 120
Query: 482 LGWGTTVQGGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
GWG T +G S L++LE+ + +KE C N ++ + D FCAG
Sbjct: 121 TGWGKTAEGSPYSP-VLNELEVDIVSKEVC-NANDSYNGTINDRYFCAG 167
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 3/151 (1%)
Frame = +2
Query: 185 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG---EISYVHFAVNHPQFSE 355
C G V++ + L+ A C E + ++ G R ++ V ++H +S
Sbjct: 574 CGGNVISPWWVLTAAHCVQDE--RASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSY 631
Query: 356 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSASDGNLH 535
D D +++++T ++F + GWG+T GS S L
Sbjct: 632 NTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ 689
Query: 536 KLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
++ L + N C Y R +T CAG
Sbjct: 690 EVGLPLVNHSQCHATYLTASRKITPRMRCAG 720
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/99 (23%), Positives = 39/99 (39%)
Frame = +2
Query: 332 VNHPQFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 511
++H +S D D +++++T ++F + GWG+T G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432
Query: 512 SASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
S S L ++ L + N C Y R +T CAG
Sbjct: 433 SPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 471
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 35.1 bits (77), Expect = 0.048
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +3
Query: 126 TPAWSKLKYSYPS*INGSNSALVLFSPTTTTFQLLPVSMENSTILHTVALSLDLPVVVSQ 305
TP S S PS S SP+T+ Q++P + + L T + S +LPV Q
Sbjct: 118 TPPISSSLSSLPSERQQSQDPSRGDSPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQ 177
Query: 306 VKYLMFTLPLTIPNSL 353
+ FT P IP +
Sbjct: 178 SFRMTFTPPSMIPKPI 193
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.1 bits (77), Expect = 0.048
Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 8/159 (5%)
Frame = +2
Query: 176 FQQCAGIVLTNYHYLSTATCFH-----GEFYDPAYRRIIAGSSRRSEPGEISY---VHFA 331
F C G ++++ ++ A H G +P ++ G+ ++ + +
Sbjct: 452 FHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQI 511
Query: 332 VNHPQFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 511
+ HP++++ D++++ + + F + GWG
Sbjct: 512 IEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDT 571
Query: 512 SASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
S L + L + + ENCR +Y D V + CAG
Sbjct: 572 QQSPDILQQAMLPIASHENCRRKYGD---VSSTAHLCAG 607
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 176 FQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA--VNHPQF 349
F C G ++++ ++ A C H Y ++ +R + + + HP++
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188
Query: 350 SEENYDKDVSIVRVTHAIHF 409
++ D++++ + + F
Sbjct: 189 NDRRIVNDIALLELATPVQF 208
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 34.7 bits (76), Expect = 0.063
Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 2/150 (1%)
Frame = +2
Query: 185 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSE-PGEISY-VHFAVNHPQFSEE 358
C G ++ ++ A C Y ++ R P + ++ + H QFS
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116
Query: 359 NYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSASDGNLHK 538
+ D++++++ + + GWG TV GGSA+ G L +
Sbjct: 117 HLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSAA-GILQQ 175
Query: 539 LELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
L V +C+ V + CAG
Sbjct: 176 AMLPVAGDSDCQRTNGRLVPVDSRSMICAG 205
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 34.7 bits (76), Expect = 0.063
Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 3/151 (1%)
Frame = +2
Query: 185 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG--EISYVHFAVNHPQFS-E 355
C G V+ ++ A CF Y + + G + V + HP+++
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPH 194
Query: 356 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSASDGNLH 535
N+D DV+++++ + + + GWG + G LH
Sbjct: 195 NNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWGHLQEAGHGP-WVLH 253
Query: 536 KLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
+ + + +++ C+ Y D V+ CAG
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG 284
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 34.7 bits (76), Expect = 0.063
Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 5/161 (3%)
Frame = +2
Query: 161 ILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAV-- 334
I N Q C G ++T ++ A C + +PA ++ G+ R+ P + ++
Sbjct: 649 IYNSGRQFCGGTLVTPEWVITAAHCVVDK--NPASIQVRLGAQDRTSPDPSVEMRISIRS 706
Query: 335 --NHPQF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQ 505
NHP + S + D++++R++ + GWGT
Sbjct: 707 IHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSS 766
Query: 506 GGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
GGS + L++ + + + C Y ++ CAG
Sbjct: 767 GGSQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAG 803
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = +2
Query: 335 NHPQFSEENYDKDVSIVRVTHAIHFGP--NXXXXXXXXXXXXXXXXXXXDLLGWGTTVQG 508
+HP+FS YD D++++R+ + +LGWG T
Sbjct: 1249 SHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVT--E 1306
Query: 509 GSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
L + + V N C+ Y++ VT + CAG
Sbjct: 1307 NKRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAG 1346
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 185 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA---VNHPQFSE 355
C G +++ ++ A C G + P+Y +++ G R+ P H + HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 356 ENYDKDVSIVRVTHAI 403
D++++ ++ +
Sbjct: 152 PQLSNDIALIELSSPV 167
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 479 LLGWGTTVQGGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAGL 631
+ GWG GG+A D L + + V ++ C Y + D CAGL
Sbjct: 827 ITGWGRLASGGTAPD-ILQQASVPVVSRARCEKAYPGK---IHDSMLCAGL 873
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 146 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 316
E F+ + W QC+G ++ H ++ A C H G+++ I+ G S S E+
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197
Query: 317 YVHFAV 334
Y FAV
Sbjct: 198 Y--FAV 201
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +2
Query: 485 GWGTTVQGGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAGL 631
GWG +G ++ L + ++ + +++ C +Q DR +T++ CAG+
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM 398
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +2
Query: 146 EVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSS---RRSEPGEIS 316
+V L + Q+C G ++ L+ A CF F P + G S RR G+
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSL 1311
Query: 317 YVHFAVNHPQFSEENYDKDVSIVRVTHAIHF 409
+ HPQ++ +++ D++++++ F
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEF 1342
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 29.9 bits (64), Expect = 1.8
Identities = 33/148 (22%), Positives = 53/148 (35%)
Frame = +2
Query: 185 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPQFSEENY 364
C G ++T L+ A C +F P+ RI S+ + E + H FS +
Sbjct: 106 CGGSLITPEWVLTAAHCVE-DFPHPSAHRIKERSAIQQE----FRLTKLFKHKDFSMSHL 160
Query: 365 DKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSASDGNLHKLE 544
DV+++++ + I + GWG V GG S+ L +
Sbjct: 161 KNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGGQPSE-ILQQAM 219
Query: 545 LIVTNKENCRNQYKDHDRVVTDHKFCAG 628
L V + C + V CAG
Sbjct: 220 LPVASHSACDRKNSYLVPVEEKSMICAG 247
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 131 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 253
+LV +E + P N+W ++ +LT Y STA G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 479 LLGWGTTVQGGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAGL 631
+ GWGT GG+ L + + + ++ C Y + + D CAGL
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL 124
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 1/114 (0%)
Frame = +2
Query: 290 RRSEPGEISY-VHFAVNHPQFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXX 466
RR + E + V + HP + + D DV+++R++H
Sbjct: 1394 RRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVG 1453
Query: 467 XXXDLLGWGTTVQGGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAG 628
+ GWG T + L + + + +++ C + VVT C G
Sbjct: 1454 KNCYITGWGRTGYNRPGA-SVLQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGG 1505
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 479 LLGWGTTVQGGSASDGNLHKLELIVTNKENCRNQYKDHDRVVTDHKFCAGL 631
+ GWGT GG+ L + + + ++ C Y + + D CAGL
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL 468
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,226,719
Number of Sequences: 59808
Number of extensions: 493496
Number of successful extensions: 1162
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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