Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10e02f
(612 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 51 6e-07
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 48 5e-06
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 46 2e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 46 3e-05
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 43 2e-04
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 41 0.001
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 40 0.002
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 38 0.008
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.015
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.020
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.020
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.026
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.026
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.034
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.045
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 35 0.045
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.079
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 34 0.10
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.10
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.18
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 33 0.18
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.24
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.24
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 31 0.56
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 30 1.7
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8) 28 5.2
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 6.9
SB_32032| Best HMM Match : PAN (HMM E-Value=0.029) 28 6.9
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 28 6.9
SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31) 28 6.9
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 27 9.1
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 51.2 bits (117), Expect = 6e-07
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWR-TRNAQARQF 358
+RIVGG+ A G P A L+ G CG +L+ VTA+HC R +
Sbjct: 209 SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTH 268
Query: 359 TLAFGTAN---IFSGGTRVTTSSVHLHGSYNM--NNLNNDVAII 475
++ G N I S R+ + ++LH YN+ + NNDVA+I
Sbjct: 269 IISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALI 312
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
+R++GG A GA P IAL + ICG SL+++T VTAAHC R++ Q+
Sbjct: 475 SRVIGGKDAIPGAWPWQ----IALKSRGNFICGGSLVSSTWVVTAAHC-VARSSNPAQYQ 529
Query: 362 LAFGTANIFSGGTRVTTSSVH---LHGSYNMNNLNNDVAII 475
+ G N T +V H YN L+ND+A+I
Sbjct: 530 IIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALI 570
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 48.8 bits (111), Expect = 3e-06
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
+RIVGGS A GA P V+ + N CG +L+T +TAAHC +N + Q
Sbjct: 629 SRIVGGSTAPPGAWPWQ---VMLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 362 LAF--GTANIFSGGTRVTTSSVHLHGSY-NMNNLNNDVAIINHNHVGFNNNIQRINLA 526
L T+ S R++ S+H H Y + +ND+A++ + + RINLA
Sbjct: 686 LGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTH--RINLA 741
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL 364
RIV G A PH ++ + ICGASLLT ++TAAHC T + A +TL
Sbjct: 240 RIVNGE----DAVPHSWPWQLSFRYKGSHICGASLLTPGWALTAAHC-LTLSDDASDYTL 294
Query: 365 AFGTANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAIIN-HNHVGFNNNIQRINLAS 529
G + G S + H ++M ++ NDVA++ +V ++ + I L S
Sbjct: 295 VAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALLKLSTYVQLSDKVGTICLPS 350
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
+R+V G A + P L + NGR ICG SL+ VTAAHC RN +T
Sbjct: 30 SRVVNGDNAQQHSWPWQISLRV---NGR-HICGGSLIAKDWVVTAAHC-VDRNPTPSGYT 84
Query: 362 LAFGTANIFSGGTRVTTS----SVHLHGSYNMNNLNNDVAIIN-HNHVGFNNNIQRINLA 526
+ G A+ +G T V + + H ++M +L ND+A++ H V ++ + + L
Sbjct: 85 VVVG-AHHRTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLP 143
Query: 527 S 529
S
Sbjct: 144 S 144
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
+RIVGG+AAN G P A L T G CG SL+ + +TAAHC ++
Sbjct: 389 SRIVGGAAANPGDWPWQAQL--RTTTG-FPYCGGSLIHSNWVLTAAHCISSKRPAEVVVR 445
Query: 362 LAFGT--ANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAII 475
L + ++ + + S++ H +YN + ND+A++
Sbjct: 446 LGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALL 485
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGL--VIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQ 355
TRIVGG+ A GA P + V ICG S++ VTAAHC+ + A+
Sbjct: 102 TRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCF-AYSKDAKD 160
Query: 356 FTLAFG--TANIFSG-GTRVTTSSVHLHGSY-NMNNLNNDVAIIN-HNHVGFNNNIQRIN 520
+T+A G N G R + LH Y NN + DVA+I + + +N+ ++ +
Sbjct: 161 YTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVC 220
Query: 521 LAS 529
L S
Sbjct: 221 LPS 223
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQF 358
GTRI+ G A + P L + ++ CGASLL+ ++TAAHC + R++ +
Sbjct: 83 GTRIINGEEAVPNSWPWQLSLRVYGSHN----CGASLLSPGWALTAAHCVQ-RSSNPADY 137
Query: 359 TLAFGT-ANIFSGGTRV-TTSSVHLHGSYNMNNLNNDVAII 475
TLA G + +V S V H ++M +L NDV ++
Sbjct: 138 TLAAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLL 178
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +2
Query: 176 DGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQ 355
DG RIVGG A PH +++ + ICG SLL+ +TAAHC R+ +
Sbjct: 27 DGVRIVGGDEAV----PHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC-VIRSNNSAD 81
Query: 356 FTLAFGTANIFSGGTRVTTSSVHLHGSY-NMNNLNNDVAII 475
+T+ G GT S+ + H Y + +D+A+I
Sbjct: 82 YTVIVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKHDLALI 122
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL 364
RIVGG A P AGL L + T +CG SL+ VTAAHC N +
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHCIDRNNPSRTGCVV 489
Query: 365 AFGTANIFSGGTRVTT---SSVH-------LHGSYNMNNLNNDVAII 475
+ G + VT + +H +H Y+ L ND+A+I
Sbjct: 490 PDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALI 536
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
+RIVGG A + P +++ N T CG SL+ +T++HC+ T N + QF
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFE 303
Query: 362 LAFGTANI 385
+ G ++
Sbjct: 304 IRLGEHDV 311
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 41.5 bits (93), Expect = 5e-04
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSI--CGASLLTNTRSVTAAHCWRTRNAQAR 352
G RI+ G A PH I+L GR+ CG SL+++ VTAAHC RN
Sbjct: 103 GARIINGQ----NAQPHSWPWQISL-RGRSGFHTCGGSLISDRWVVTAAHCIH-RNKNPG 156
Query: 353 QFTLAFGTANIFSGGTRV----TTSSVHLHGSYNMNNLNNDVAII 475
+T+ G A+ G T V S + H YN + ND+A++
Sbjct: 157 GYTVVVG-AHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALL 200
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 41.1 bits (92), Expect = 7e-04
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC-WRTRNAQARQFT 361
RIVGG A AGA P LA + + + CG +L+ VTAAHC +
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHCFYYDGKIVPSDIL 778
Query: 362 LAFG--TANIFSGGTR-VTTSSVHLHGSYNMNNLNNDVAII 475
+ G + G + V S++ LH N N L+ DVA+I
Sbjct: 779 VRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALI 819
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL 364
+IVGG GA P + T G ICG S++ + VTAAHC T+ A ++T+
Sbjct: 1782 QIVGGKVTEHGAWPWQVQIGYK-TMGH--ICGGSIVNSQWIVTAAHCVTTKPPGASRYTM 1838
Query: 365 -AFGTANIFSG--------GT--RVTTSSVHLHGSYNMNNLNNDVAIIN-HNHVGFNNNI 508
AF N+ G G+ + + +H SY N+L+ D+A++ + FN +
Sbjct: 1839 YAFSDLNVTLGEHQLYQLDGSEQNIPIEGIVVHPSY--NDLDYDIALLKLRQPITFNAYV 1896
Query: 509 QRINL 523
++ L
Sbjct: 1897 SQVCL 1901
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHCWR-TRNAQARQ 355
+R++ G A A A P L + G CG SL+ + +TAAHC RN R+
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIRN--PRR 93
Query: 356 FTLAFGTANIFSGGT----RVTTSSVHLHGSYNMNNLNNDVAII 475
+++ G A+ G T +++ S ++ H Y+ + L +DVA+I
Sbjct: 94 YSVYVG-AHELDGTTQVEEKISISKIYSHEKYSSSLLTSDVALI 136
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
+RI+GG+ A P A ++I + CG +L+ VTAAHC +N + +
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHC-VFQNIEPSNYK 341
Query: 362 LAFGTANIFS--GGTRVTTSSVHLHGSYNMN-NLNNDVAII 475
+ G + S G + +++H+H + + + D+AI+
Sbjct: 342 IKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIM 382
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 245 IALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVT--TSS 418
IAL + ICG SL++ T VTAAHC + + GT T
Sbjct: 83 IALERSGSFICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKR 142
Query: 419 VHLHGSYNMNNLNNDVAII 475
+ H +YN L+ND+A+I
Sbjct: 143 IITHPTYNSPQLSNDIALI 161
Score = 35.5 bits (78), Expect = 0.034
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
TRIVGG+AA G P A L T+G CG SL+ +TA HC +R
Sbjct: 662 TRIVGGTAAKQGDWPWQAQL--RSTSG-FPFCGGSLIHPQWVLTATHCVSSRRPTDLNIR 718
Query: 362 LAFGTANIFSGGTR-VTTSSVHLHGSYNMN-NLNNDVAII 475
L G + + + +H Y L +D+A+I
Sbjct: 719 LGAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHDIALI 758
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQF 358
G RIV G A + + P +A L +N T CGA+L+ ++TAAHC + ++
Sbjct: 323 GARIVNGQEAVSHSWPWIASLRKGRSNYHT--CGATLIRPGWAITAAHC----VMRPDKY 376
Query: 359 TLAFGTANIFS---GGTRVTTSSVHLHGSYNMNNLNNDVAII 475
T+ G+ + + + V+ H ++M N +D+A++
Sbjct: 377 TVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALL 418
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTN-GRTSICGASLLTNTRSVTAAHC 325
G R++ G A PH I+L GR CG +L+++ VTA+HC
Sbjct: 27 GARVINGQ----NAQPHSWPWQISLRPYGRYHSCGGTLISDRWVVTASHC 72
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 248 ALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVHL 427
A NG ICG SLL++T +TAAHC R+ +T+ G GT S+ +
Sbjct: 332 ATLNGH-HICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYK 389
Query: 428 HGSY-NMNNLNNDVAII 475
H Y + +D+A+I
Sbjct: 390 HEKYVGGKDKKHDLALI 406
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 37.5 bits (83), Expect = 0.008
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC----WRTRNAQ 346
GTRI+ GS A + P + + I NG CG +L++ VTAAHC +N
Sbjct: 349 GTRIISGSDAQPNSWPWM--VQINYNNGHH--CGGTLVSPQWVVTAAHCVDHVKDPKNYN 404
Query: 347 ARQFTLAFGTANIFSG-GTRVTTSSVHLHGSY-NMNNLNNDVAIINHN 484
TL + G R + + + +H Y +NND+A+I N
Sbjct: 405 ELAITLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLN 452
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 37.5 bits (83), Expect = 0.008
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
TRIVGG+AA G P A L T CG SL+ +TA HC QA
Sbjct: 9 TRIVGGTAAKHGDWPWQAQL---RTTSGFPYCGGSLIAPQWILTATHC--VERKQASSIV 63
Query: 362 LAFGT-ANIFSGGTR--VTTSSVHLHGSYNM-NNLNNDVAII 475
+ G + + GT + V H SY+ ++D+A++
Sbjct: 64 IRLGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALL 105
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Frame = +2
Query: 188 IVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLA 367
I+GG+ A G P + + ++ ICG ++++ +TAAHC ++ +A L
Sbjct: 546 IMGGANAEHGEWPWQVSMKLN-SSSLPHICGGNVISPWWVLTAAHCV--QDERASNIKLT 602
Query: 368 FGTANIFS-GGTR--VTTSSVHLHGSYNMNNLNNDVAIINHNH-VGFNNNIQRINL 523
G +F+ GT + + H +Y+ N ++ D A++ + F +Q + L
Sbjct: 603 MGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL 658
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 328
RIVGG A GA P L L NG T CG SL+ VTA HC+
Sbjct: 53 RIVGGVEAAPGAWPWQVAL---LMNG-TQFCGGSLVNENWVVTARHCF 96
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNG-RTSICGASLLTNTRSVTAAHCWRTRN 340
RIVGG+ A G P G+ +G + ICG +L+ +TAAHC+ N
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCFYKTN 178
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 328
RIVGG + GA P A L + NG CG S++ + VTAAHC+
Sbjct: 26 RIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHCF 70
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQ-ARQFT 361
R+VGG A AG P IAL R CG +L+ VT AHC+ ++ R +
Sbjct: 28 RVVGGDEAKAGQFPWQ----IALLFKRQQYCGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 362 LAFGTANI 385
+ G N+
Sbjct: 84 VTLGEYNL 91
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
GTRIVGG+ A P A L A G + CG SL+ +TAAHC
Sbjct: 257 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHC 302
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 35.9 bits (79), Expect = 0.026
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQF 358
G+RIVGG+ A P A +++ NG CG SL+ +TAAHC +
Sbjct: 27 GSRIVGGTEAPINGWPWQA-MLLRSPNG-DQFCGGSLIDPGWVLTAAHCLVGEQPDSALL 84
Query: 359 TLAFGTANIFSGGTRVTTSSVHLHGSYNMN-NLNNDVAIIN-HNHVGFNNNIQRINLAS 529
+ + + + + H +Y+ + ND+A++ N N + + LA+
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCLAN 143
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +2
Query: 239 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANI---FSGGTRVT 409
+ + L+ CG +L+ +TAAHC+ R + ++T+ G +++ G ++
Sbjct: 1254 VALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSLS 1312
Query: 410 TSSVHLHGSYNMNNLNNDVAIIN-HNHVGFNNNIQRI 517
++ +H YN ++ +D+A++ FN+ + I
Sbjct: 1313 IKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPI 1349
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
GTRIVGG+ A P A L A G + CG SL+ +TAAHC
Sbjct: 217 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHC 262
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.5 bits (78), Expect = 0.034
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTR 337
RIVGG A+ + P LV+ NG CG SL+ VT+ HC+ R
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCFDQR 296
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 239 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 373
+++ N T CG SL+ +T++HC+ T N + QF + G
Sbjct: 3 IILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.5 bits (78), Expect = 0.034
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
TRIVGG+ A GA P A L +N CG +L+ +TAAHC R F
Sbjct: 138 TRIVGGTKAPPGAWPWQAML---RSNYGGQFCGGTLVHPQWVITAAHCVYRRG--PNDFK 192
Query: 362 LAFGTANIFSG--GTR--VTTSSVHLHGSYNM-NNLNNDVAII 475
+ G A+ G GT + S V H SY+ +D+A+I
Sbjct: 193 IRMG-AHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALI 234
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.1 bits (77), Expect = 0.045
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
TR++ GS A G P A L + T ICG SL+ +TAAHC + +A +
Sbjct: 30 TRVISGSEALLGEWPWQAWLHLQHTG---FICGGSLVAPGWVLTAAHCILSDDASKYKVV 86
Query: 362 LAFGTANIFSGGTR-VTTSSVHLHGSYNMNNLN-NDVAII 475
L G + + + V H +Y N NDVA++
Sbjct: 87 LGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALL 126
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 35.1 bits (77), Expect = 0.045
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
TRIVGG+AA A P A L A CG +L+ VTA+HC + + +
Sbjct: 22 TRIVGGTAAPKNAWPWQAQLRSA---SGFPFCGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 362 LAFGTANIFSGGTRV---TTSSVHLHGSY-NMNNLNNDVAII 475
L SG + V + H Y N NL ND+A+I
Sbjct: 79 LG-AHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVI 119
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 34.3 bits (75), Expect = 0.079
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Frame = +2
Query: 116 NKIGIPXXXXXXXXXXXXDFDGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLT 295
N+ +P D +R+V G A G P A L + +G +CG SL+
Sbjct: 38 NEKSLPLVQTNAEHCGVSDSASSRVVSGDDATLGEWPWQAWLHVT-PHG--FVCGGSLIA 94
Query: 296 NTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRV-TTSSVHLHGSYNMN-NLNNDVA 469
+TA HC T + + + L + G ++ + H Y+ + +NDVA
Sbjct: 95 PQWVLTAGHCILTEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVA 154
Query: 470 IINHNHVGF 496
++ + F
Sbjct: 155 LLQLSRPAF 163
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFT 361
+ I+GG+ A G P L + +CG +LLT+ +TAA C+R N +A ++
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTHYG---PVCGGTLLTSEWVLTAARCFRD-NKRAGEWK 311
Query: 362 LAFGTANIF 388
+ G + +
Sbjct: 312 VILGETDFY 320
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 33.9 bits (74), Expect = 0.10
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRT-RNAQARQF 358
+R+V G A + P L + NGR ICG SL+T +TAAHC + A +
Sbjct: 79 SRVVNGDNAAQHSWPWQISLRV---NGR-HICGGSLITPEWVLTAAHCVEDFPHPSAHRI 134
Query: 359 TLAFGTANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAII 475
F R+T + H ++M++L NDVA++
Sbjct: 135 KERSAIQQEF----RLT--KLFKHKDFSMSHLKNDVALL 167
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
+RIVGG+ A GA P A ++ NG CG +L+ VTA+HC
Sbjct: 247 SRIVGGTTAQRGAWPWQA--MLRYYNG-NHFCGGTLVHPRWVVTASHC 291
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRN 340
RIVGG GA+P + + G CG SL++ +TAAHC RN
Sbjct: 107 RIVGGHDTVKGAYPWH----VLIRKGGHVACGGSLISEKWVLTAAHCVTHRN 154
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
+R++GG AA + P ++++ G+ CG +L+++ +TAAHC
Sbjct: 475 SRVIGGEAARPYSWPWQ----VSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHC 325
G RI+ G A PH I+L GR +CG +L+++ VTA+HC
Sbjct: 843 GARIINGQ----NAQPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 179 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQF 358
G R++GG A PH I+L +CG +L++ +TA HC + +
Sbjct: 433 GARVIGGE----DAAPHSWPWQISLRVRGKHMCGGTLISPDWVLTAGHCVHGQ-LDPSGY 487
Query: 359 TLAFGTAN 382
T+ GT N
Sbjct: 488 TVVVGTLN 495
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQA 349
TRIVGG+AA + P A L T CG SL+ +TA HC ++A +
Sbjct: 52 TRIVGGTAAKQNSWPWQAQL---RTTSGFPYCGGSLIHPQWILTATHCVSGKSASS 104
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQAR 352
RI+GG + HP + +++ CG SL+ VTAAHC+ + + R
Sbjct: 40 RIMGGQRSTIEQHPWMVAMML----DSAQACGGSLVPEDWIVTAAHCFDSNRLRWR 91
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +2
Query: 182 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
+R+V G+ A A P L TNG+ ICG SL+T +TAAHC
Sbjct: 36 SRVVNGANAPQHAWPWQISL---RTNGQ-HICGGSLITPEWVLTAAHC 79
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQA 349
RIVGG ++ G P L++ N R +C SL+ +TA HC++ + A
Sbjct: 53 RIVGGVVSSEGLWPWQVALLL---NDR-QVCAGSLIEARWIITAGHCFKDPRSSA 103
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIAL--TNGRTSICGASLLTNTRSVTAAHC 325
RI GGS + G +P L +N T CG +L+ +TAAHC
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 446 NNLNNDVAIINHNHVG-FNNNIQRINL 523
NN+NN+ IIN+N++ NNNI IN+
Sbjct: 409 NNINNNNIIINNNNIIIINNNIININI 435
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 452 LNNDVAIINHNHVGFNNNIQRINL 523
+NN+ IIN+N++ NNNI N+
Sbjct: 393 INNNNIIINNNNIIINNNINNNNI 416
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 422 HLHGSYNMNNLNNDVAIINHNHVGFNNNIQRIN 520
+++ + N NN NN++ IN+N+ NNNI N
Sbjct: 92 NINNNNNNNNNNNNINNINNNNNNNNNNINNNN 124
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 401 RVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNN 505
R +S++ + N N++NN+ + IN+N+ NNN
Sbjct: 1759 RNNNNSINNRNNTNNNSINNNNSSINNNNSSINNN 1793
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 97 GLFCHDHGRQRHQYCCEDLHGYY 29
G FCH H R CC+DL Y
Sbjct: 601 GSFCHIHPTDRFAVCCKDLLSSY 623
>SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8)
Length = 213
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 434 SYNMNNLNNDVAIINHNHVGFNNN 505
S N NN+NN++ I N+N+ NNN
Sbjct: 126 SDNNNNINNNIIINNNNNNDENNN 149
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 185 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 325
R+V GS + P L+ + CG +L+ VTAAHC
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHC 89
>SB_32032| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 610
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 490 WLQQQHPAHQPSQWKQQLCWYLGLGCRLR 576
W+ + HP H+ ++LC+ +G C R
Sbjct: 457 WMNESHPRHEDGIVSRRLCYRVGGDCCAR 485
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 377 ANIFSGGTRVTTSSVHLHGSYNMN-NLNNDVAIINHNHVGFNNNIQRINL 523
A I++GGT + + H N N N NN+ N N+ NN I ++
Sbjct: 978 AYIYAGGTATPDTGISEHNDNNNNTNTNNNSDNNNTNNNSDNNTINNYSV 1027
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Frame = +2
Query: 251 LTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSG------GTR--- 403
L R C L++ +TAAHC+ R + Q + G SG G+R
Sbjct: 1106 LNRRRFPFCSGVLISARHVITAAHCF-DRIIRTDQIIVRLGAYIARSGRLDWGMGSRWEQ 1164
Query: 404 -VTTSSVHLHGSYNM-NNLNNDVAII 475
+ +++H H SY ND+A++
Sbjct: 1165 EIAVAAIHKHPSYQAPTRWANDIAVL 1190
>SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31)
Length = 273
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 440 NMNNLNNDVAIINHNHVGFNNN 505
N NN+NN+ I N+N++ NNN
Sbjct: 238 NNNNINNNNNINNNNNINNNNN 259
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 142 LSPGDTDLVVVVKFDGLFCHDHGRQRH-QYCCEDLHGYYQFTGSLE 8
LSP + V+ K G++C G Q H C + +Y+ G+ E
Sbjct: 413 LSPNSSAWSVLCKCGGIWCFKCGSQAHWPASCVEARKFYRIAGNYE 458
>SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 422 HLHGSYNMNNLNNDVAIINHNHVGFNNNIQR 514
H +G NN NN+ IIN+N+ NNI++
Sbjct: 24 HNNGHNITNNNNNNNIIINNNNDNSKNNIKK 54
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 256 RECDHKSSKMGVSTSVGGRTTHNPGTVEVSGF 161
R+CD +S S TTH G +++GF
Sbjct: 270 RDCDDSASSTSDKESAPDETTHASGNTKLTGF 301
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,424,063
Number of Sequences: 59808
Number of extensions: 298065
Number of successful extensions: 2118
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -