BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10d24f (606 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 2.5 M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 3.3 AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic pr... 24 4.4 U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 23 5.8 U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 23 5.8 AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 23 5.8 AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CY... 23 7.7 >AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase protein. Length = 1099 Score = 24.6 bits (51), Expect = 2.5 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -1 Query: 330 PTPPPVRRTLANCVDPRTRTALTR 259 P+PPP RT A D R R A R Sbjct: 1069 PSPPPSPRTAARRADLRLRQARFR 1092 >M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. Length = 1212 Score = 24.2 bits (50), Expect = 3.3 Identities = 13/32 (40%), Positives = 13/32 (40%) Frame = -1 Query: 354 N*RFTKVKPTPPPVRRTLANCVDPRTRTALTR 259 N R P PPP R A D R R A R Sbjct: 1126 NRRSQPTPPAPPPTPREAARLEDGRRRVARWR 1157 >AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic protein. Length = 379 Score = 23.8 bits (49), Expect = 4.4 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%) Frame = -1 Query: 267 LTRLPAG----AVYLTLTARELVVAARLTTKLRKSLSLEVILPILKALDLSVDLGSATSL 100 +T +P G A LTLT RE + + R + +V++ + + L Sbjct: 94 VTSIPRGEKLRAAELTLT-REGIAHRSSRAQARTPVLYQVMVYDIVRPGVKGKRAPTFLL 152 Query: 99 VDTATIAVNTNNRANF 52 VDT T+A+N + A+F Sbjct: 153 VDTKTLAINESGTASF 168 >U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase protein. Length = 260 Score = 23.4 bits (48), Expect = 5.8 Identities = 8/18 (44%), Positives = 14/18 (77%) Frame = -3 Query: 61 SELHLAGNLYWYSESIVS 8 +E HLA +++W+S+ I S Sbjct: 54 AEEHLAASIFWWSKIIFS 71 >U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase protein. Length = 332 Score = 23.4 bits (48), Expect = 5.8 Identities = 8/18 (44%), Positives = 14/18 (77%) Frame = -3 Query: 61 SELHLAGNLYWYSESIVS 8 +E HLA +++W+S+ I S Sbjct: 126 AEEHLAASIFWWSKIIFS 143 >AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease protein. Length = 375 Score = 23.4 bits (48), Expect = 5.8 Identities = 10/45 (22%), Positives = 22/45 (48%) Frame = -3 Query: 478 RIFCANEKTKTSCLCM*TSRICILASPNLYCKAKSSSRRVHELKI 344 R N K +C S+ +L++ + + AKS ++H +++ Sbjct: 119 RFQARNRKIHGNCGASLVSKRFVLSAAHCFTAAKSKGWKIHSVRV 163 >AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CYP9K1 protein. Length = 531 Score = 23.0 bits (47), Expect = 7.7 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +1 Query: 397 LGTLKCIFWTFTCKDTKFLFFRLHKKFVL 483 LG CI F +TK +FF L F+L Sbjct: 470 LGPRNCIGSRFALMETKAVFFFLLTHFLL 498 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 528,650 Number of Sequences: 2352 Number of extensions: 8771 Number of successful extensions: 27 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 58870980 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -