Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10d23r
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 93 1e-19
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 91 6e-19
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 90 1e-18
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 88 5e-18
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 88 5e-18
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 88 5e-18
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 66 2e-11
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 66 2e-11
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 64 8e-11
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 52 4e-07
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 45 7e-05
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 34 0.12
11_01_0455 + 3517281-3519798,3519888-3520261 31 1.1
01_06_1603 - 38564330-38564341,38564608-38564835 30 1.5
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389... 29 4.6
04_04_1184 + 31558678-31558707,31559485-31559644,31559732-315603... 29 4.6
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186... 28 6.0
08_01_0412 + 3675767-3676069,3676627-3677877 28 8.0
05_01_0479 - 3920992-3921513,3921643-3921756,3921905-3922482,392... 28 8.0
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 28 8.0
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 546
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 179
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 91.5 bits (217), Expect = 6e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 139 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 183
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 90.2 bits (214), Expect = 1e-18
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 546
AMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ + N
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIAN 179
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 88.2 bits (209), Expect = 5e-18
Identities = 37/45 (82%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 150 AMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 194
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 88.2 bits (209), Expect = 5e-18
Identities = 37/45 (82%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 256 AMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 300
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 88.2 bits (209), Expect = 5e-18
Identities = 37/45 (82%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 177
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 66.5 bits (155), Expect = 2e-11
Identities = 25/45 (55%), Positives = 38/45 (84%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AM+ AEITD L LHS++N +W+IQA+CA +G+GLY+GL W++ ++
Sbjct: 242 AMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYDGLGWIAQKV 286
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 549
AM E+ + LGL+ L+NR W+IQ +CA GDGLYEGLDWL++ LK
Sbjct: 133 AMTPLEVCEGLGLYDLKNRIWHIQGSCALKGDGLYEGLDWLASTLK 178
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 64.5 bits (150), Expect = 8e-11
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AM E+ + LGL+ L NR W+IQ TCA GDGLYEGLDWL+ L
Sbjct: 133 AMTPMEVCEGLGLYDLNNRIWHIQGTCALKGDGLYEGLDWLATTL 177
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -2
Query: 686 AMNAAEITDKLGLHS-LRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 546
AM+++E+ +LG + L+NR W+ Q A +GDGL+ GLDWL++ L++
Sbjct: 132 AMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWLASTLRD 179
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLD 570
A++ A IT+ L LH +++R W I T A G+GL+EGLD
Sbjct: 148 ALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEGLD 186
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 537
A+ E+ L L L R + QA A G G+ G+DWL +++ + R
Sbjct: 273 AVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEMERSKR 322
>11_01_0455 + 3517281-3519798,3519888-3520261
Length = 963
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3
Query: 403 LVTEGAPHSFRTRCNTARCVR 341
L TEGA HSF T CN R VR
Sbjct: 682 LETEGAEHSFITECNALRKVR 702
>01_06_1603 - 38564330-38564341,38564608-38564835
Length = 79
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -3
Query: 658 NWVCIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 515
+W+C+ G S APL + C ++TG+ R N +S
Sbjct: 22 HWMCLHVPFTVGASVPFAPLIKPTCVEIATGAFAPERQTICNESSESS 69
>09_04_0237 -
15936630-15937250,15937457-15937534,15938874-15938973,
15940414-15942278
Length = 887
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = -3
Query: 640 CATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 461
CAT G DC++ + + + R A + +++ER G R ++
Sbjct: 564 CATCGGEWSTADDADHRDCSKGPEAAMVK-KLADERRWKACPKCRMLVERTAGCRVMSCR 622
Query: 460 CY*IQCIMCGI 428
C + C +CG+
Sbjct: 623 CRMVFCYLCGL 633
>04_04_1184 +
31558678-31558707,31559485-31559644,31559732-31560394,
31560512-31560956,31561090-31561171,31561319-31561534
Length = 531
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 646 IRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQT 509
+ +V P+P D +R TG+P+ S TPT + C+ T
Sbjct: 289 VHSVSVRDVGTEMTPIPSQDPSR--TGTPLGSMTPTRSPNCSIPST 332
>04_03_0286 +
13915705-13915984,13916478-13917062,13918188-13918661,
13918963-13920208,13920282-13920297
Length = 866
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 585 QSVSGSGACRLDVPVTVAQRMQTQFV 662
Q +G+G C +DVP+ AQ +Q FV
Sbjct: 171 QDCNGTGCCSIDVPIR-AQTLQLMFV 195
>08_01_0412 + 3675767-3676069,3676627-3677877
Length = 517
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 398 DRRRAAFVPNQMQYGTLCALKYCFSKYYINYVYLNAI 288
D +RA PN++ YG L Y +++ Y+ AI
Sbjct: 244 DMKRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAI 280
>05_01_0479 -
3920992-3921513,3921643-3921756,3921905-3922482,
3922709-3923067,3923132-3923205
Length = 548
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 29 YVINLSRVSYIPIHITMCDHTGEMLHLFLPPL 124
Y+ N + VSY P+H H G++ L P L
Sbjct: 493 YIANSNHVSYFPVHAITKLHEGDVQSLVDPKL 524
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 559 ISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 461
++++ ANR C + QTN++ ++D L FI
Sbjct: 502 LTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFI 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,760,208
Number of Sequences: 37544
Number of extensions: 383542
Number of successful extensions: 932
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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