Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d23r
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-19|AAK18851.1|  181|Caenorhabditis elegans Adp-ribosylati...   103   1e-22
AY519855-1|AAR89636.1|  180|Caenorhabditis elegans ADP-ribosylat...    88   5e-18
AF045644-6|AAC02598.1|  180|Caenorhabditis elegans Adp-ribosylat...    88   5e-18
AL117204-5|CAB55153.1|  175|Caenorhabditis elegans Hypothetical ...    67   1e-11
U70852-7|AAK29813.1|  179|Caenorhabditis elegans Adp-ribosylatio...    54   7e-08
Z22181-6|CAA80185.1|  178|Caenorhabditis elegans Hypothetical pr...    53   2e-07
Z93378-2|CAB07583.1|  184|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z46241-6|CAA86319.1|  190|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z49967-8|CAA90255.1|  180|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z50044-1|CAA90353.2|  184|Caenorhabditis elegans Hypothetical pr...    40   0.002
U80847-2|AAB37982.2|  475|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z66496-6|CAA91281.3|  191|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z48585-12|CAI46589.1|  191|Caenorhabditis elegans Hypothetical p...    29   3.1  
U80023-10|AAG24042.1|   97|Caenorhabditis elegans Hypothetical p...    28   5.4  
U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF068716-1|AAC17747.1|  247|Caenorhabditis elegans Hypothetical ...    27   9.5  

>U32305-19|AAK18851.1|  181|Caenorhabditis elegans Adp-ribosylation
           factor relatedprotein 1.2 protein.
          Length = 181

 Score =  103 bits (247), Expect = 1e-22
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 546
           AMNAAE+TDKLGLHSLRNR+WYIQATCATSGDGLYEGLDWLSNQLKN
Sbjct: 133 AMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKN 179


>AY519855-1|AAR89636.1|  180|Caenorhabditis elegans ADP-ribosylation
           factor related(20.5 kD) (arf-3) protein.
          Length = 180

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
           AM AAE+TDKLGLH+LR+R WYIQATCAT G GLYEGLDWLSNQL
Sbjct: 133 AMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177


>AF045644-6|AAC02598.1|  180|Caenorhabditis elegans Adp-ribosylation
           factor relatedprotein 3 protein.
          Length = 180

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
           AM AAE+TDKLGLH+LR+R WYIQATCAT G GLYEGLDWLSNQL
Sbjct: 133 AMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177


>AL117204-5|CAB55153.1|  175|Caenorhabditis elegans Hypothetical
           protein Y116A8C.12 protein.
          Length = 175

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 549
           AM   EI DKLGL  +R+RNWY+Q +CA++GDGL+EGL WLS   K
Sbjct: 129 AMKPHEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEGLTWLSQNCK 174


>U70852-7|AAK29813.1|  179|Caenorhabditis elegans Adp-ribosylation
           factor relatedprotein 1.1 protein.
          Length = 179

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 25/46 (54%), Positives = 31/46 (67%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 549
           A + AE+T  L L SL+NR W+I  T A SG GLYEGL W+  Q+K
Sbjct: 133 ARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178


>Z22181-6|CAA80185.1|  178|Caenorhabditis elegans Hypothetical
           protein ZK632.8 protein.
          Length = 178

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRN-RNWYIQATCATSGDGLYEGLDWLSNQL 552
           AMN AE++ +LGL +LR  R W I   CA  G+GL E L+W++N L
Sbjct: 133 AMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178


>Z93378-2|CAB07583.1|  184|Caenorhabditis elegans Hypothetical
           protein F19H8.3 protein.
          Length = 184

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 537
           A ++ EIT KL L  LR+R W+IQA  A   +G+ +G+ W+++ LK A++
Sbjct: 134 AASSEEITRKLNLDLLRDRTWHIQACSALKNEGINDGITWVASNLKPASK 183


>Z46241-6|CAA86319.1|  190|Caenorhabditis elegans Hypothetical
           protein C38D4.8 protein.
          Length = 190

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
           AM A++IT  LGL+  R+  W I +TCA +GDGL + +  LS ++
Sbjct: 137 AMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181


>Z49967-8|CAA90255.1|  180|Caenorhabditis elegans Hypothetical
           protein F54C9.10 protein.
          Length = 180

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = -2

Query: 683 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 549
           +   E+   LGL +LRNR   I  T A+ G+GL   +DWL+NQL+
Sbjct: 133 LTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQ 177


>Z50044-1|CAA90353.2|  184|Caenorhabditis elegans Hypothetical
           protein F22B5.1 protein.
          Length = 184

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -2

Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
           A++   I   L LHS+++ +W I + CA SGD L + + WL + +
Sbjct: 132 AIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDV 176


>U80847-2|AAB37982.2|  475|Caenorhabditis elegans Hypothetical
           protein C17H11.1 protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -2

Query: 365 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLYLVAL 240
           + Y  +   K  F  YY  Y+    ING  I+ + C +L+ L
Sbjct: 104 IHYCLVSTTKMAFVMYYTTYIEAPFINGFLISGLYCSFLLTL 145


>Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical
           protein K04H8.3 protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = -3

Query: 502 IIERDYGLRYVNFIC---Y*IQCIMCGIINVLLT-RHLVTEGAPHSFRT 368
           I E+   LRY NFIC   + + C +   + + +T R++   G P +F T
Sbjct: 105 ITEQQLNLRYYNFICSSHFHLDCKLTETLQICMTDRYVAVLGLPLAFDT 153


>Z66496-6|CAA91281.3|  191|Caenorhabditis elegans Hypothetical
           protein E04D5.4 protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 649 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 515
           C  CA  T T+   A  P TDCT+ +     +  TP   + CA +
Sbjct: 91  CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135


>Z48585-12|CAI46589.1|  191|Caenorhabditis elegans Hypothetical
           protein E04D5.4 protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 649 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 515
           C  CA  T T+   A  P TDCT+ +     +  TP   + CA +
Sbjct: 91  CGFCAEETTTASTCADDPNTDCTQYTFLCSNAKYTPLLQQFCAKT 135


>U80023-10|AAG24042.1|   97|Caenorhabditis elegans Hypothetical
           protein F07C4.11 protein.
          Length = 97

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/58 (25%), Positives = 21/58 (36%)
 Frame = -3

Query: 649 CIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLR 476
           C RC + T  S   A +  + CT  +  S  S      N  C N    L   + +  R
Sbjct: 35  CARCPSTTAASALAAAVAASSCTTYAADSSPSCAAWAKNGFCTNMSYTLAQRKSFCAR 92


>U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical
           protein F45F2.5 protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 365 MQYGTLCALKYCFSKYYINYVYLNAINGMQINSVQCLY 252
           ++Y   C L Y  +  Y  Y+YL  +    INS  C+Y
Sbjct: 67  LEYSIFCVLMYAVAVAYFLYLYLFVLYPNVINS--CIY 102


>AF068716-1|AAC17747.1|  247|Caenorhabditis elegans Hypothetical
           protein F26D11.4 protein.
          Length = 247

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 677 AAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSN 558
           A EI D    HS     WY ++T  T  D ++  + +LSN
Sbjct: 147 AFEIADGSSNHSYLQSAWYTESTRRTDQDIVFNCMMYLSN 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,383,754
Number of Sequences: 27780
Number of extensions: 348551
Number of successful extensions: 931
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)