Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10d23r
(687 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 93 1e-19
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 91 5e-19
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 91 5e-19
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 91 5e-19
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 91 5e-19
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 91 5e-19
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 91 5e-19
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 91 5e-19
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 69 2e-12
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 67 9e-12
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 66 2e-11
At1g02440.1 68414.m00192 ADP-ribosylation factor, putative simil... 64 6e-11
At1g02430.1 68414.m00190 ADP-ribosylation factor, putative simil... 64 6e-11
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 64 1e-10
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 62 3e-10
At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2 ... 36 0.019
At5g35450.1 68418.m04215 disease resistance protein (CC-NBS-LRR ... 29 2.2
At1g55140.1 68414.m06297 URF 4-related weak similarity to URF 4 ... 29 3.8
At5g62070.1 68418.m07790 calmodulin-binding family protein conta... 28 5.0
At5g67560.1 68418.m08519 ADP-ribosylation factor, putative ident... 28 6.7
At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR ... 27 8.8
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 27 8.8
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 27 8.8
At2g46210.1 68415.m05746 delta-8 sphingolipid desaturase, putati... 27 8.8
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 546
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 179
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 133 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 546
AM+ E+ + LGL L+NR W+IQ TCA GDGLYEGLDWLS+ LK+
Sbjct: 133 AMSPREVCEGLGLFDLKNRKWHIQGTCALRGDGLYEGLDWLSSTLKD 179
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 549
AM+ E+ + LGL L+NR W+IQ TCA GDGLYEGLDWLS LK
Sbjct: 133 AMSPREVCEGLGLLDLKNRKWHIQGTCALQGDGLYEGLDWLSATLK 178
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 66.5 bits (155), Expect = 2e-11
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 552
AM AEITD L LHS++N +W+IQA+CA +G+GLY+GL W++ ++
Sbjct: 133 AMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKV 177
>At1g02440.1 68414.m00192 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:AAA32729 GI:166586 from
(Arabidopsis thaliana)
Length = 190
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRN----RNWYIQATCATSGDGLYEGLDWLSNQLKNANR 537
AM+A+EI++KL L SLR RNW++Q++CA SGDGL+EGLDWL LKNA R
Sbjct: 139 AMSASEISNKLDLTSLRKKNWQRNWHVQSSCAFSGDGLHEGLDWL---LKNAER 189
>At1g02430.1 68414.m00190 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 157
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRN----RNWYIQATCATSGDGLYEGLDWLSNQLKNANR 537
AM+A+EI++KL L SLR RNW++Q++CA SGDGL+EGLDWL LKNA R
Sbjct: 106 AMSASEISNKLDLTSLRQKNWQRNWHVQSSCAFSGDGLHEGLDWL---LKNAER 156
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 546
A+ AE+ +KLGLHSL R W IQ T A SG GLYEGL+WLS + N
Sbjct: 133 ALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTIPN 179
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNAN 540
A++ A +T+ L LH +++R W I TCA G+GL+EGLDWLSN LK+ +
Sbjct: 133 ALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKSGS 181
>At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2
(ARL2) identical to ARL2 G-protein (Halimasch; HAL;
TITAN5) GI:20514265 from [Arabidopsis thaliana];
identical to cDNA ARL2 G-protein mRNA GI:20514264;
contains Pfam profile PF00025: ADP-ribosylation factor
family; contains TIGRfam profile TIGR00231: small
GTP-binding protein domain
Length = 185
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSL-RNRNWYIQATCATSGDGLYEGLDWL 564
A+ EI L L S+ ++R+W I A +G+GL EG DWL
Sbjct: 132 ALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWL 173
>At5g35450.1 68418.m04215 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 590 RLRKWRMSLGCTSYGCAANADPVCLLSRLRSL 685
R R W+M L + G +ADP CL R R L
Sbjct: 288 RKRGWKMLLTSRNEGVGLHADPTCLSFRARIL 319
>At1g55140.1 68414.m06297 URF 4-related weak similarity to URF 4
(GI:49224) [Synechococcus sp.]
Length = 305
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 14 TYKTCYVINLSRVSYIPIHITMCDHTGEMLHLFLPPLS 127
T CYVI ++ Y+ + + C + H PPLS
Sbjct: 157 TMSLCYVILTNKFLYLSLAVLGCKNIYARRHFLFPPLS 194
>At5g62070.1 68418.m07790 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 403
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 407 SSGDRRRAAFVP-NQMQYGTLCALKYCFSKYYINYV 303
SSG RRR F P ++ +Y C Y +S Y+ NY+
Sbjct: 287 SSGSRRRTPFTPTSRSEYSWGCN-NYYYSGYHPNYM 321
>At5g67560.1 68418.m08519 ADP-ribosylation factor, putative
identical to GP:15450888 ADP-ribosylation factor-like
protein {Arabidopsis thaliana]
Length = 184
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -2
Query: 686 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNAN 540
A++ +TD++GL SL +R + + + +DWL K++N
Sbjct: 136 ALSKEALTDEMGLKSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSSN 184
>At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 908
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 590 RLRKWRMSLGCTSYGCAANADPVCLLSR 673
R R W+M L + G +ADP CL R
Sbjct: 290 RKRGWKMLLTSRNEGVGIHADPTCLTFR 317
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 590 RLRKWRMSLGCTSYGCAANADPVCLLSR 673
R R W+M L + G +ADP CL R
Sbjct: 290 RKRGWKMLLTSRNEGVGIHADPTCLTFR 317
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 590 RLRKWRMSLGCTSYGCAANADPVCLLSR 673
R R W+M L + G +ADP CL R
Sbjct: 290 RKRGWKMLLTSRNEGVGIHADPTCLTFR 317
>At2g46210.1 68415.m05746 delta-8 sphingolipid desaturase, putative
similar to delta-8 sphingolipid desaturase GI:3819708
from [Brassica napus]
Length = 449
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 167 QLYTLYFVQRH---RGSNTRRMIISWTLTPLSTSIAPN 271
Q + L F +RH R N +++ WT PL S PN
Sbjct: 269 QTFLLLFSKRHVPDRALNIAGILVFWTWFPLLVSFLPN 306
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,071,203
Number of Sequences: 28952
Number of extensions: 309642
Number of successful extensions: 818
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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