Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d22r
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    37   5e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   5.4  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 494  RRLEALTVKKYGSVDSG--LNRVGIAAPGTNKHAVEGSNPIW 375
            R+L A  +  +GS         V  A P TNKH+++GSNPIW
Sbjct: 1761 RQLRAAKIAAFGSTGPSRMYQEVLGAVPNTNKHSMKGSNPIW 1802


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -1

Query: 512  RTKKLNRRLEALTVKKYGSVDSGLNRVGIAA--PGTNKHAVEGSNPIWNETIKAPDFDSM 339
            R ++ NRRL  ++ +   + D G  R  +AA   G    A++  N   +  + A +  ++
Sbjct: 1155 RERRRNRRLLGMSGQAINNDDDGRERADLAAGPSGMRNRAIDEENEATDGGLNAAEEAAV 1214

Query: 338  SDA 330
             +A
Sbjct: 1215 VEA 1217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,945
Number of Sequences: 2352
Number of extensions: 13005
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)