Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d22r
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U10438-14|ABB88242.1|  441|Caenorhabditis elegans Hypothetical p...    28   7.7  

>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical protein
            T01E8.3 protein.
          Length = 1299

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = -1

Query: 413  TNKHAVEGSNPIWNET----IKAPDFDSMSDASNDSDLIGIEDLPHFGENNYFPHD 258
            T   A  G NPIWN+T    I+ P+   +     D D +G +  P  G+   FP D
Sbjct: 1102 TKTIASNGLNPIWNQTFTFEIQCPEVALIRFHVEDGDFVGPKTDPFIGQ-AVFPVD 1156


>Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical
           protein F25H2.1 protein.
          Length = 457

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -1

Query: 488 LEALTVKKYGSV--DSGLN-RVGIAAPGTNKHAVEGSNPIWNETIKA 357
           LEA  VK YG V  D     RVG     TN  A  G  P WN T+ A
Sbjct: 59  LEANLVKNYGLVRMDPYCRVRVGNVEFDTNVAANAGRAPTWNRTLNA 105


>U10438-14|ABB88242.1|  441|Caenorhabditis elegans Hypothetical
           protein B0280.11 protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 314 LIGIEDLPHFGENNYFPHDFDEMKT 240
           LIG ++L     + YFP DF E KT
Sbjct: 239 LIGEDELDKAALSEYFPEDFKEFKT 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,596,175
Number of Sequences: 27780
Number of extensions: 291726
Number of successful extensions: 850
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)