Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d22r
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.94 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.8  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -2

Query: 187 QHPSVRNLQINSRNKLNNETEIQFVLKFFFYGFYKCIPTHFTKKRNANLQSDTF 26
           +H + R+   N    L +ET+I  V +       K +PT+  K +N +L+ +T+
Sbjct: 222 KHINTRHNTKNGMKTLLSETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTW 275


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = -1

Query: 404 HAVEGSNPIWNETIKAPDFDSMSDASNDSDLIGIEDLPHFGENNYFP-HDFDEMKTDKPE 228
           H   GS       IK     S+  +  DS    IE      +N+     D +  KT++P 
Sbjct: 266 HETFGSKKTMELHIKTHSDSSVVGSPRDSP---IEPEIEISQNSVSTGSDKENHKTEEPN 322

Query: 227 DIVATHNN 204
           D VAT++N
Sbjct: 323 DEVATYDN 330


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 397 WKAPIRSGTRPLKPRT 350
           WK+ + SGT  L+ RT
Sbjct: 449 WKSILESGTTTLQTRT 464


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 85  KCIPTHFTKKRNANLQSDTFVTQFICKY 2
           KC    F++ +N N  S T    F  KY
Sbjct: 83  KCSLVEFSENKNCNAGSLTVKKNFANKY 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,221
Number of Sequences: 438
Number of extensions: 3331
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)