Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d22f
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.0  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 256 ADEVSPHFGDAVHDDPAGVSGRND 185
           A ++ PH+ +  ++DP G +G  +
Sbjct: 32  AQQMPPHYSNYHYEDPYGYTGSEE 55


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 256 ADEVSPHFGDAVHDDPAGVSGRND 185
           A ++ PH+ +  ++DP G +G  +
Sbjct: 32  AQQMPPHYSNYHYEDPYGYTGSEE 55


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 256 ADEVSPHFGDAVHDDPAGVSGRND 185
           A ++ PH+ +  ++DP G +G  +
Sbjct: 32  AQQMPPHYSNYHYEDPYGYTGSEE 55


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 132 KSVFCSTCSKVLTNKKKTRFLVEIK 58
           K  + S  SKV    KK ++LVE++
Sbjct: 151 KEEYISFESKVFHKLKKMKYLVEVQ 175


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 587 WCPAPRCRRGSNLNLPIRTS*P 522
           W PAP+  R  N N  I  S P
Sbjct: 342 WPPAPQTDRLCNKNFVIEASKP 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,651
Number of Sequences: 336
Number of extensions: 2238
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)