Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d21r
         (747 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00001D96AE Cluster: U exon; n=1; Human adenovirus ty...    33   5.6  
UniRef50_Q22RA5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_UPI00001D96AE Cluster: U exon; n=1; Human adenovirus type
           12|Rep: U exon - Human adenovirus type 12
          Length = 52

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 404 QESHLKFKIWKKYHITKKIFFSYLNEVNLIKI 499
           +ES L FKIW+K+ + K + F    E N I++
Sbjct: 10  EESDLPFKIWRKFAVCKSVRFDSWEEGNFIRV 41


>UniRef50_Q22RA5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1197

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 343 QEQHVEG*EAVCFKRHYCNSTGEPFKV*NLEKISHNEKNLFQ 468
           ++ HV   EA+  K+ YC +    FK+ NL K SHN K  F+
Sbjct: 12  RKDHVLNNEAIKLKKEYCENCFVQFKIVNL-KFSHNCKRCFR 52


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,418,900
Number of Sequences: 1657284
Number of extensions: 12649733
Number of successful extensions: 23697
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23695
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)