Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d21r
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   2.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   2.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   2.3  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   5.3  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   5.3  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   5.3  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   5.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   7.0  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 383 LKQTASHPSTCCSCTDK 333
           L  TASH    C C DK
Sbjct: 78  LTNTASHTRLSCDCDDK 94


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 383 LKQTASHPSTCCSCTDK 333
           L  TASH    C C DK
Sbjct: 83  LTNTASHTRLSCDCDDK 99


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 383 LKQTASHPSTCCSCTDK 333
           L  TASH    C C DK
Sbjct: 83  LTNTASHTRLSCDCDDK 99


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 302 HNVLEFILYMIKKQIVTA 249
           HNVL+ +LY  ++ I+ A
Sbjct: 165 HNVLDMVLYWDQEPIILA 182


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 142 YENENTKQLLRYSHNKIYY 198
           Y N N K+L   ++ K+YY
Sbjct: 91  YNNNNYKKLYCNNYKKLYY 109


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 142 YENENTKQLLRYSHNKIYY 198
           Y N N K+L   ++ K+YY
Sbjct: 91  YNNNNYKKLYCNNYKKLYY 109


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 142 YENENTKQLLRYSHNKIYY 198
           Y N N K+L   ++ K+YY
Sbjct: 91  YNNNNYKKLYCNNYRKLYY 109


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 317 KTNTPLYLCRNNMSRGERLFVLSDIIATLQESHL 418
           K+ +P    R+N S   + F+LSD + +  ++ L
Sbjct: 86  KSKSPESRDRSNTSNTSKTFILSDKLESSDDTSL 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,613
Number of Sequences: 438
Number of extensions: 4120
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)