Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d21f
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 34  LLSLCGFVINLIQKWC 81
           L+  C FV+ L QK+C
Sbjct: 181 LIQFCAFVVVLKQKFC 196


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory
          receptor candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 34 LLSLCGFVINLIQKWC 81
          L+  C FV+ L QK+C
Sbjct: 6  LIQFCAFVVVLKQKFC 21


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 483 VDPKKQFRPLSKFGNAFLDPIPVFNCHVGRTTR 581
           V  +K+ +P SKF    L+   +FN +V +  R
Sbjct: 241 VTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKR 273


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
 Frame = -2

Query: 437 NGYKSICSRLWTNTDARKISL*QIPDKCRFTG-----GVLSHEKYHGFGIE-IWIFEL-- 282
           NGY   C+R     D +K  L  +P    FT       +     + G G + +++     
Sbjct: 203 NGYAISCARYRFMPDIKKKGLHSLPRLVLFTSEDAHYSIKKLASFQGIGTDNVYLIRTDA 262

Query: 281 -RRMEIVELVVQLKR 240
             RM++  LV +++R
Sbjct: 263 RGRMDVSHLVEEIER 277


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 186 NIENVVEGLKRIYK 227
           NIE +  GLKR+ K
Sbjct: 244 NIERLCNGLKRVVK 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,945
Number of Sequences: 336
Number of extensions: 3324
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)