Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d21f
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   1.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.5  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 517 LLNGRNCFFGSTTNALPGITPSFSSNITAINLSVV 413
           LL+GR+    STT   PG TP+  + + A+N+  V
Sbjct: 372 LLSGRSQ--KSTTGPPPGPTPAQKARMRALNIDRV 404


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 52  FVINLIQKWCSECI 93
           FV+NL   +CS+CI
Sbjct: 352 FVVNLWSGFCSQCI 365


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 64  DLLQIRRDLKDHHHHI 17
           + LQ    L++HHHH+
Sbjct: 136 ETLQRHHHLQNHHHHL 151



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -3

Query: 403  PIRMPGKSLSSKYLINVVLPVEYCPTRSIMGLASKSGSSS 284
            P  MP   ++    +  +LP +Y  T  I GL  +  +++
Sbjct: 1167 PPFMPSPFMAGAPNVPTILPEQYFATSRIRGLQEQQRNAA 1206


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 211 SPSTTFSIFSAFSPSFLSQLNIMNV 137
           SPS+  S FS+ SP+ L   N   +
Sbjct: 92  SPSSPSSFFSSVSPTSLGSENYTGI 116


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 246 ELHYQFHDFHSPQLEDPD 299
           +LH Q H + +P + DPD
Sbjct: 446 KLHRQPHIYPNPDVFDPD 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,536
Number of Sequences: 438
Number of extensions: 3748
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)