Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10d21f
(633 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05520.2 68417.m00839 calcium-binding EF hand family protein ... 148 3e-36
At4g05520.1 68417.m00838 calcium-binding EF hand family protein ... 148 3e-36
At3g20290.1 68416.m02571 calcium-binding EF hand family protein ... 146 1e-35
At4g19210.1 68417.m02834 RNase L inhibitor protein, putative sim... 31 0.48
At3g13640.1 68416.m01718 RNase L inhibitor protein, putative sim... 31 0.64
At1g64550.1 68414.m07317 ABC transporter family protein similar ... 30 1.1
At4g30300.1 68417.m04306 ABC transporter family protein ribonucl... 29 1.9
At3g46780.1 68416.m05078 expressed protein 29 1.9
At1g03160.1 68414.m00293 GTP-binding protein-related contains TI... 29 1.9
At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identic... 29 3.4
At1g02740.1 68414.m00227 MRG family protein member of Pfam PF057... 29 3.4
At2g38150.1 68415.m04683 alpha 1,4-glycosyltransferase family pr... 28 4.5
At3g53190.1 68416.m05861 pectate lyase family protein similar to... 28 5.9
At3g19720.2 68416.m02498 dynamin family protein identical to cDN... 28 5.9
At3g19720.1 68416.m02497 dynamin family protein identical to cDN... 28 5.9
At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identic... 28 5.9
At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identic... 28 5.9
At1g14420.1 68414.m01710 pectate lyase family protein similar to... 28 5.9
>At4g05520.2 68417.m00839 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 545
Score = 148 bits (359), Expect = 3e-36
Identities = 69/129 (53%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Frame = +3
Query: 156 WLKKEG--EKAENIENVVEGLKRIYKTKLLPLELHYQFHDFHSPQLEDPDFDAKPMILLV 329
W K + + N+ +V+GLKR+Y KL PLE+ Y+F+DF SP L DFDAKPM++L+
Sbjct: 143 WFKSKSIIKPQVNVVTIVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLL 202
Query: 330 GQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRFIAVMFDEKEGVIPGNALVVDPKKQFRP 509
GQYSTGKTTFI++LL D+PG IGPEPTTDRF+ M E IPGN + V F
Sbjct: 203 GQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNG 262
Query: 510 LSKFGNAFL 536
L+ FG AFL
Sbjct: 263 LTSFGGAFL 271
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 541 RFQCSTVTSDVLRGISIVDTPGILSGEKQRV 633
+F+CS + VL I++VDTPG+LSGEKQR+
Sbjct: 273 KFECSQMPHPVLDQITLVDTPGVLSGEKQRM 303
>At4g05520.1 68417.m00838 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4, {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 546
Score = 148 bits (359), Expect = 3e-36
Identities = 69/129 (53%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Frame = +3
Query: 156 WLKKEG--EKAENIENVVEGLKRIYKTKLLPLELHYQFHDFHSPQLEDPDFDAKPMILLV 329
W K + + N+ +V+GLKR+Y KL PLE+ Y+F+DF SP L DFDAKPM++L+
Sbjct: 144 WFKSKSIIKPQVNVVTIVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLL 203
Query: 330 GQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRFIAVMFDEKEGVIPGNALVVDPKKQFRP 509
GQYSTGKTTFI++LL D+PG IGPEPTTDRF+ M E IPGN + V F
Sbjct: 204 GQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNG 263
Query: 510 LSKFGNAFL 536
L+ FG AFL
Sbjct: 264 LTSFGGAFL 272
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 541 RFQCSTVTSDVLRGISIVDTPGILSGEKQRV 633
+F+CS + VL I++VDTPG+LSGEKQR+
Sbjct: 274 KFECSQMPHPVLDQITLVDTPGVLSGEKQRM 304
>At3g20290.1 68416.m02571 calcium-binding EF hand family protein
similar to EH-domain containing protein 1 from {Mus
musculus} SP|Q9WVK4 and {Homo sapiens} SP|Q9H4M9,
receptor-mediated endocytosis 1 from [Caenorhabditis
elegans] GI:13487775, GI:13487777, GI:13487779; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 545
Score = 146 bits (353), Expect = 1e-35
Identities = 69/137 (50%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Frame = +3
Query: 135 NTFIMFSWLKKEGEKA---ENIENVVEGLKRIYKTKLLPLELHYQFHDFHSPQLEDPDFD 305
+T + W + K ++ ++V+GLKR+Y KL PLE+ Y+F+DF SP L + DFD
Sbjct: 136 DTSLTAHWFSSKSSKKISLSSVTSIVDGLKRLYIQKLKPLEVAYRFNDFVSPLLTNSDFD 195
Query: 306 AKPMILLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRFIAVMFDEKEGVIPGNALVV 485
AKPM++L+GQYSTGKTTFI++LL+ +PG IGPEPTTDRF+ VM E IPGN + V
Sbjct: 196 AKPMVMLLGQYSTGKTTFIKHLLKSTYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAV 255
Query: 486 DPKKQFRPLSKFGNAFL 536
F L+ FG AFL
Sbjct: 256 QADMPFSGLTTFGTAFL 272
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 541 RFQCSTVTSDVLRGISIVDTPGILSGEKQR 630
+F+CS + +L ++ VDTPG+LSGEKQR
Sbjct: 274 KFECSQMPHPLLEHVTFVDTPGVLSGEKQR 303
>At4g19210.1 68417.m02834 RNase L inhibitor protein, putative
similar to 68 kDa protein HP68 GI:16755057 from
[Triticum aestivum]
Length = 605
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 282 QLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRF 428
++ + +F +I+++G+ TGKTTFIR L P GP+ F
Sbjct: 365 RVSEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDDTEGPDREIPEF 413
>At3g13640.1 68416.m01718 RNase L inhibitor protein, putative
similar to 68 kDa protein HP68 GI:16755057 from
[Triticum aestivum]
Length = 603
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 258 QFHDFHSPQLEDPDFDAKPMILLVGQYSTGKTTFIRYL 371
Q DF +E +F +I+++G+ TGKTTFIR L
Sbjct: 358 QLGDFKLEVMEG-EFTDSQIIVMLGENGTGKTTFIRML 394
>At1g64550.1 68414.m07317 ABC transporter family protein similar to
ABC transporter protein GB:AAF31030 GI:6899653 from
[Leishmania major]
Length = 715
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 324 LVGQYSTGKTTFIRYLLERDFPGI 395
LVG+ TGKTTF+RY+ GI
Sbjct: 205 LVGRNGTGKTTFLRYMAMHAIEGI 228
>At4g30300.1 68417.m04306 ABC transporter family protein
ribonuclease L inhibitor - Mus musculus,PIR2:JC6555
Length = 181
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 282 QLEDPDFDAKPMILLVGQYSTGKTTFIRYL 371
+L +F +I+++G+ TGKTTFI+ L
Sbjct: 11 RLNQGEFTDSQIIVMLGENGTGKTTFIKML 40
>At3g46780.1 68416.m05078 expressed protein
Length = 510
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -3
Query: 490 GSTTNALPGITPSFSSNITAINLSVVGSGPIRMPGKSLSSKYLINVVLPVEYCPTRSIMG 311
GST N L GIT SF N+ A + + S I ++ + LI L ++ P ++
Sbjct: 217 GSTYNVLDGIT-SFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNV 275
Query: 310 LASKSGSSS 284
+ S GS+S
Sbjct: 276 VVSAEGSNS 284
>At1g03160.1 68414.m00293 GTP-binding protein-related contains
TIGRFAM TIGR00650: GTP-binding conserved hypothetical
protein domain; contains TIGRFAM TIGR00231: small
GTP-binding protein domain; similar to mitofusin 1
precursor (GI:12744896) [Homo sapiens]
Length = 642
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/47 (27%), Positives = 30/47 (63%)
Frame = +3
Query: 315 MILLVGQYSTGKTTFIRYLLERDFPGIRIGPEPTTDRFIAVMFDEKE 455
++++VG++++GK+T I LL + + ++ G PTT+ + + + E
Sbjct: 351 LMVIVGEFNSGKSTVINALLGKRY--LKEGVVPTTNEITFLCYSDLE 395
>At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identical
to dynamin like protein 2a (ADL2a) [Arabidopsis
thaliana] GI:19032337; supported by cDNA gi:19032336
Length = 808
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 282 QLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDF 386
QL A P +++VG S+GK++ + L+ RDF
Sbjct: 50 QLGSQSTIALPQVVVVGSQSSGKSSVLEALVGRDF 84
>At1g02740.1 68414.m00227 MRG family protein member of Pfam PF05712:
MRG; similar to Transcription factor-like protein MRG15
(MORF-related gene 15 protein) (MSL3-1 protein) (Protein
HSPC008/HSPC061) (SP:Q9UBU8) {Homo sapiens}
Length = 316
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 153 SWLKKEGEKAENIENVVEGLKRIYKTKLLPLELHY 257
S +KK G +++E +++GL R Y K LP+ L Y
Sbjct: 202 SQMKKHGRVTDSLEEILKGL-RCYFDKALPVMLLY 235
>At2g38150.1 68415.m04683 alpha 1,4-glycosyltransferase family
protein / glycosyltransferase sugar-binding DXD
motif-containing protein low similarity to
alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens
[gi:5726306], Gb3 synthase, Rattus norvegicus
[gi:9082162] ; contains Pfam profiles PF04572: Alpha
1,4-glycosyltransferase conserved region, PF04488:
Glycosyltransferase sugar-binding region containing DXD
motif
Length = 736
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -3
Query: 355 VVLPVEYCPTRSIMGLASKSGSSSCGEWKSWNW*CSSRGNSLVL*ILLSPSTTFSIFSAF 176
V L ++ TRS GL + G+ + E S NW +R N+ VL +S F
Sbjct: 209 VYLDTDFIVTRSFKGLKNSIGAQTVVEGDSKNW---TRLNNAVLIFEKDHPLVYSFIEEF 265
Query: 175 SPSF 164
+ +F
Sbjct: 266 ASTF 269
>At3g53190.1 68416.m05861 pectate lyase family protein similar to
pectate lyase 2 GP:6606534 from [Musa acuminata]
Length = 483
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 331 PTRSIMGLASKSGSSSCGEWKSWNW*CSSRGNSLV 227
PT +K + G+WK WNW S G+ LV
Sbjct: 342 PTNPFAKEVTKRVETPDGDWKGWNW--RSEGDILV 374
>At3g19720.2 68416.m02498 dynamin family protein identical to cDNA
dynamin-like protein (ARC5) GI: 30349145; contains Pfam
profile PF00350: Dynamin family
Length = 741
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 249 LHYQFHDFHS--PQLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDF 386
L+ +++ H+ +LE P F+A P +L+VGQ + GK+ + L+ F
Sbjct: 28 LYEAYNELHALAQELETP-FEA-PAVLVVGQQTDGKSALVEALMGFQF 73
>At3g19720.1 68416.m02497 dynamin family protein identical to cDNA
dynamin-like protein (ARC5) GI: 30349145; contains Pfam
profile PF00350: Dynamin family
Length = 777
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 249 LHYQFHDFHS--PQLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDF 386
L+ +++ H+ +LE P F+A P +L+VGQ + GK+ + L+ F
Sbjct: 28 LYEAYNELHALAQELETP-FEA-PAVLVVGQQTDGKSALVEALMGFQF 73
>At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 282 QLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDF 386
QL A P + +VG S+GK++ + L+ RDF
Sbjct: 34 QLGSQSTIALPQVAVVGSQSSGKSSVLEALVGRDF 68
>At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 282 QLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDF 386
QL A P + +VG S+GK++ + L+ RDF
Sbjct: 34 QLGSQSTIALPQVAVVGSQSSGKSSVLEALVGRDF 68
>At1g14420.1 68414.m01710 pectate lyase family protein similar to
pectate lyase P59 SP:P15722 from [Lycopersicon
esculentum]
Length = 459
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 280 GEWKSWNW 257
GEWKSWNW
Sbjct: 390 GEWKSWNW 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,674,460
Number of Sequences: 28952
Number of extensions: 286951
Number of successful extensions: 1012
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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