Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d08r
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   6.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.2  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -1

Query: 214 ETDCSIPCYVHSNRSKDLAGRNVESCFSLTVKQSKPAVLNVLGSVTIRLAF 62
           ET  + P Y  S+ S+     NVE   +L VK   P    V+G  T    F
Sbjct: 288 ETGHNAPLYSPSSDSQYQKQLNVEHAANLWVKLGTPKEKLVIGMPTYGRTF 338


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -1

Query: 169 KDLAGRNVESCFSLTVKQSK-PAVLNVLGSVTIR 71
           + L  +N E CFSL +K  K P  L  +  V ++
Sbjct: 515 RTLGNQNSEMCFSLKLKNKKLPPFLAEIWDVDLK 548


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 169 KDLAGRNVESCFSLTVKQS 113
           +DLA RNV  C + TVK S
Sbjct: 616 RDLAARNVLVCENHTVKVS 634


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 381 RRSYIKARPRFGLATVDL 328
           + SY+KA+   G+A VDL
Sbjct: 398 KASYVKAKGLGGIAIVDL 415


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 625 SGIRNIQGHTITHFMKGQRXHTSVN 699
           + +RN+Q HT    ++ ++ H   N
Sbjct: 102 NSVRNVQQHTFADLIQLEQIHLDDN 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,720
Number of Sequences: 336
Number of extensions: 3541
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)