Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d08r
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66033-1|AAC51118.1|  572|Homo sapiens glypican-5 protein.             30   7.9  
BC039730-1|AAH39730.1|  572|Homo sapiens glypican 5 protein.           30   7.9  
BC030254-1|AAH30254.1|  433|Homo sapiens chromosome 20 open read...    30   7.9  
AL163537-2|CAI13232.1|  572|Homo sapiens glypican 5 protein.           30   7.9  
AL162456-1|CAI17090.1|  572|Homo sapiens glypican 5 protein.           30   7.9  
AL157821-1|CAC34558.2|  572|Homo sapiens glypican 5 protein.           30   7.9  
AL157363-1|CAH71865.1|  572|Homo sapiens glypican 5 protein.           30   7.9  
AL138714-1|CAH70260.1|  572|Homo sapiens glypican 5 protein.           30   7.9  
AL031658-5|CAI42581.1|  433|Homo sapiens chromosome 20 open read...    30   7.9  
AF001462-1|AAC12261.1|  572|Homo sapiens glypican-5 protein.           30   7.9  

>U66033-1|AAC51118.1|  572|Homo sapiens glypican-5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


>BC039730-1|AAH39730.1|  572|Homo sapiens glypican 5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


>BC030254-1|AAH30254.1|  433|Homo sapiens chromosome 20 open reading
           frame 160 protein.
          Length = 433

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 176 SKQRFGWA*CGVLF-QSHSETIQACCA*CSWQCNDST 69
           S  R  W+ CGV +  S S +++ CC    W C   T
Sbjct: 392 SSYRITWSRCGVSWGPSRSSSLRCCCGSTGWGCPSRT 428


>AL163537-2|CAI13232.1|  572|Homo sapiens glypican 5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


>AL162456-1|CAI17090.1|  572|Homo sapiens glypican 5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


>AL157821-1|CAC34558.2|  572|Homo sapiens glypican 5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


>AL157363-1|CAH71865.1|  572|Homo sapiens glypican 5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


>AL138714-1|CAH70260.1|  572|Homo sapiens glypican 5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


>AL031658-5|CAI42581.1|  433|Homo sapiens chromosome 20 open reading
           frame 160 protein.
          Length = 433

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 176 SKQRFGWA*CGVLF-QSHSETIQACCA*CSWQCNDST 69
           S  R  W+ CGV +  S S +++ CC    W C   T
Sbjct: 392 SSYRITWSRCGVSWGPSRSSSLRCCCGSTGWGCPSRT 428


>AF001462-1|AAC12261.1|  572|Homo sapiens glypican-5 protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 330 LFFCSTYNNMILNLPSMFRNIGVNVSLSLVGSD 232
           + FCSTY NM L   +  +    +V L L G+D
Sbjct: 124 ILFCSTYRNMALEAAASVQEFFTDVGLYLFGAD 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,571,752
Number of Sequences: 237096
Number of extensions: 1948428
Number of successful extensions: 2863
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2861
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)