BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10d05r (749 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY236870-1|AAP41817.1| 701|Homo sapiens MUC19 protein. 39 0.022 AK093065-1|BAC04041.1| 280|Homo sapiens protein ( Homo sapiens ... 38 0.029 X63454-1|CAA45054.1| 198|Homo sapiens hst-2 (FGF-6) protein. 34 0.63 X57075-3|CAA40360.1| 82|Homo sapiens FGF6 protein. 34 0.63 X57075-2|CAA40359.1| 105|Homo sapiens FGF6 protein. 34 0.63 X57075-1|CAA40358.1| 115|Homo sapiens FGF6 protein. 34 0.63 BC121098-1|AAI21099.1| 208|Homo sapiens fibroblast growth facto... 34 0.63 BC121097-1|AAI21098.1| 208|Homo sapiens fibroblast growth facto... 34 0.63 AY581424-1|AAS79318.1| 208|Homo sapiens fibroblast growth facto... 34 0.63 S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein. 32 2.5 S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein. 32 2.5 S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein. 32 2.5 AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein. 32 2.5 AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor... 32 2.5 Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 31 3.3 Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 31 5.8 >AY236870-1|AAP41817.1| 701|Homo sapiens MUC19 protein. Length = 701 Score = 38.7 bits (86), Expect = 0.022 Identities = 30/101 (29%), Positives = 43/101 (42%) Frame = +1 Query: 370 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVAL 549 G T GS + T+ P ++ T T +A + +TG T G S T +TGVAL Sbjct: 102 GSMTTALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVAL 161 Query: 550 AASLMLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSG 672 + ++ T + G T G T GA+TR G Sbjct: 162 STTVAPGSSSTEATTSTGVHRTTVVGQKT-GATTRGSAKQG 201 >AK093065-1|BAC04041.1| 280|Homo sapiens protein ( Homo sapiens cDNA FLJ35746 fis, clone TESTI2004399, moderately similar to APOMUCIN. ). Length = 280 Score = 38.3 bits (85), Expect = 0.029 Identities = 29/97 (29%), Positives = 42/97 (43%) Frame = +1 Query: 382 TMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASL 561 T GS + T+ P ++ T T +A + +TG T G S T +TGVAL+ ++ Sbjct: 3 TALGSQLSSSQTVIPGSSGTISHTTVAPGSSVTGTTTGASDDQVTGSKTGTTGVALSTTV 62 Query: 562 MLIRMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTSG 672 T + G T G T GA+TR G Sbjct: 63 APGSSSTEATTSTGVHRTTVVGQKT-GATTRGSAKQG 98 >X63454-1|CAA45054.1| 198|Homo sapiens hst-2 (FGF-6) protein. Length = 198 Score = 33.9 bits (74), Expect = 0.63 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476 +RG +S G G + V+W G+ G+ R Y ++G + + DGRIS Sbjct: 41 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 99 Query: 477 HGRN 488 H N Sbjct: 100 HEEN 103 >X57075-3|CAA40360.1| 82|Homo sapiens FGF6 protein. Length = 82 Score = 33.9 bits (74), Expect = 0.63 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476 +RG +S G G + V+W G+ G+ R Y ++G + + DGRIS Sbjct: 18 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 76 Query: 477 HGRN 488 H N Sbjct: 77 HEEN 80 >X57075-2|CAA40359.1| 105|Homo sapiens FGF6 protein. Length = 105 Score = 33.9 bits (74), Expect = 0.63 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476 +RG +S G G + V+W G+ G+ R Y ++G + + DGRIS Sbjct: 41 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 99 Query: 477 HGRN 488 H N Sbjct: 100 HEEN 103 >X57075-1|CAA40358.1| 115|Homo sapiens FGF6 protein. Length = 115 Score = 33.9 bits (74), Expect = 0.63 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476 +RG +S G G + V+W G+ G+ R Y ++G + + DGRIS Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109 Query: 477 HGRN 488 H N Sbjct: 110 HEEN 113 >BC121098-1|AAI21099.1| 208|Homo sapiens fibroblast growth factor 6 protein. Length = 208 Score = 33.9 bits (74), Expect = 0.63 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476 +RG +S G G + V+W G+ G+ R Y ++G + + DGRIS Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109 Query: 477 HGRN 488 H N Sbjct: 110 HEEN 113 >BC121097-1|AAI21098.1| 208|Homo sapiens fibroblast growth factor 6 protein. Length = 208 Score = 33.9 bits (74), Expect = 0.63 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476 +RG +S G G + V+W G+ G+ R Y ++G + + DGRIS Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109 Query: 477 HGRN 488 H N Sbjct: 110 HEEN 113 >AY581424-1|AAS79318.1| 208|Homo sapiens fibroblast growth factor 6 protein. Length = 208 Score = 33.9 bits (74), Expect = 0.63 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 300 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY-DGRISND 476 +RG +S G G + V+W G+ G+ R Y ++G + + DGRIS Sbjct: 51 SRGWGTLLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYC-NVGIGFHLQVLPDGRISGT 109 Query: 477 HGRN 488 H N Sbjct: 110 HEEN 113 >S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein. Length = 81 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77 >S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein. Length = 97 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 47 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 85 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 55 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 93 >S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein. Length = 89 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 7 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 45 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 15 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 53 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 23 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 61 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 31 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 69 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 39 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 77 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 47 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 85 >AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein. Length = 277 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 57 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 95 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 65 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 103 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 73 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 111 >AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor protein. Length = 285 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 57 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 95 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 65 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 103 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 73 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 111 Score = 31.9 bits (69), Expect = 2.5 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +3 Query: 297 WARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 413 W + H G HGG G W + H GG H G Sbjct: 81 WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGG 119 >Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. Length = 279 Score = 31.5 bits (68), Expect = 3.3 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Frame = +1 Query: 394 SATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGV-ALAASLMLI 570 SAT T T GP T + + T SA T T+G +T +T T V + + I Sbjct: 122 SATTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPI 181 Query: 571 RMWTRGVSCPGTRGPTWTGDGTMGASTRAGPTS 669 T + GP T AST + T+ Sbjct: 182 SSTTSATTTSRISGPETTPSPVPTASTTSASTT 214 Score = 30.3 bits (65), Expect = 7.7 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 1/93 (1%) Frame = +1 Query: 394 SATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASLMLIR 573 SAT T GP T + + T SA T T+G +T +T + V ++ Sbjct: 186 SATTTSRISGPETTPSPVPTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSAST 245 Query: 574 MWTRGVSCPG-TRGPTWTGDGTMGASTRAGPTS 669 T S T GP T ST + PT+ Sbjct: 246 TSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTT 278 >Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. Length = 940 Score = 30.7 bits (66), Expect = 5.8 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = +3 Query: 306 GHNGRVSHDHGGHQGH-VTNVHWARGHN--GGVSHDHRGYTRSLGNNYRARYYDGRISND 476 GH HGG GH + +V RGH+ G H+HRG+ R +DG + Sbjct: 844 GHRPHEGPGHGGPHGHRLHDVPGHRGHDHRGQPPHEHRGHDGPGHGGGGHRGHDG--GHS 901 Query: 477 HG 482 HG Sbjct: 902 HG 903 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 70,125,356 Number of Sequences: 237096 Number of extensions: 1237909 Number of successful extensions: 8229 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 7651 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8166 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 9015132854 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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