Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d02r
         (713 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0531 - 15073952-15074017,15075883-15076073,15076173-15076239     31   0.69 
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266...    28   6.4  

>05_03_0531 - 15073952-15074017,15075883-15076073,15076173-15076239
          Length = 107

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -2

Query: 604 QHVGPPRGPSH*TMHLPRQR--NWCLWW*QWWCID 506
           Q +G PRG +    H  R R  +W   W  WWCID
Sbjct: 16  QPIGHPRGFALSRAHPSRARCSHWTPDWTSWWCID 50


>07_01_0362 -
           2667031-2667090,2667182-2667426,2667749-2669471,
           2669578-2669921,2670544-2670667,2671350-2671599,
           2672486-2672571
          Length = 943

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 571 NGWVHVGGPRVEVYGRLGRGPDTGLTVNCSHVD 669
           NGWV  G  R  V GR   G D G +++ + VD
Sbjct: 396 NGWVAEGTERENVEGRGEAGTDEGKSLSNAQVD 428


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,601,867
Number of Sequences: 37544
Number of extensions: 335096
Number of successful extensions: 685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)