Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d02f
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   6.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.4  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 318 DGDAEVDVQNSARIYTGHTMSSCEYG 241
           D   E+DV+ + + Y+   +S+C +G
Sbjct: 159 DHTEEIDVKTAMKKYSVDIISTCAFG 184


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +3

Query: 129 PY-RRRDRSCSREPPPHGFS 185
           PY  +R +S S  PPPH ++
Sbjct: 267 PYPMQRPKSASLSPPPHVYN 286


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 133 YGHLDRRARRRWINPSPQESEVRNTQ*MP 47
           YG  + RARR     SP+ + +++T  +P
Sbjct: 331 YGVFNIRARRTGRKVSPRVNTIKHTSCIP 359


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 133 YGHLDRRARRRWINPSPQESEVRNTQ*MP 47
           YG  + RARR     SP+ + +++T  +P
Sbjct: 331 YGVFNIRARRTGRKVSPRVNTIKHTSCIP 359


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +1

Query: 301 NLRVTVGTNEWNSGGTEYT 357
           NL+  V    WN G   Y+
Sbjct: 91  NLKTLVAIGGWNEGSVNYS 109


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 572 SITKSFSESGSRCPILPHPATLT 504
           S+T+ + ++G   P++   +TLT
Sbjct: 406 SLTRLYKKAGKEIPVILWTSTLT 428


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,847
Number of Sequences: 336
Number of extensions: 3637
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)