Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10d02f
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 69 2e-12
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 68 7e-12
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 66 2e-11
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 62 4e-10
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 60 1e-09
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 60 1e-09
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 59 3e-09
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 56 2e-08
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 56 3e-08
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 55 4e-08
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 55 5e-08
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 54 7e-08
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 52 5e-07
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 51 7e-07
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 50 1e-06
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 50 2e-06
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 49 4e-06
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 48 5e-06
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 47 1e-05
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 45 6e-05
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 43 2e-04
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 42 4e-04
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 42 4e-04
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 40 0.002
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 39 0.003
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 38 0.005
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 38 0.009
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.11
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.25
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 31 0.58
SB_47036| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 30 1.8
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 30 1.8
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_35887| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 29 3.1
SB_8506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_59789| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_56271| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_52479| Best HMM Match : Laminin_B (HMM E-Value=2.2) 28 7.1
SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 7.1
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7) 27 9.4
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 27 9.4
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_4004| Best HMM Match : PSS (HMM E-Value=1.7e-10) 27 9.4
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 70.9 bits (166), Expect = 8e-13
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Frame = +1
Query: 124 NARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHIN 303
N+RIVGGT A G+ P L F CGG+LV R V+TA HCV + G +
Sbjct: 246 NSRIVGGTTAQRGAWPWQAMLRYYNGNHF-CGGTLVHPRWVVTASHCVHKLTTG-----D 299
Query: 304 LRVTVGTNEWNSGGT----EYTVARNITHPDF-SLIYLKNDIGLLITDEEVKLSDAVRPI 468
L V +G + W G T ++ + R HP++ S + NDI LL+ D +L
Sbjct: 300 LYVRMGAH-WKDGKTGSEQDFRIQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLA 358
Query: 469 KLS--YDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEACVRA 609
L+ + G ++GWGR+ L+ V + G+ C +A
Sbjct: 359 CLAPRSSPLPDGTRCWISGWGRLSSGGASPNVLMQAQVPLVSGQTCSQA 407
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 69.3 bits (162), Expect = 2e-12
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHI--- 300
+IVGG G+ P V + + ICGGS+V+++ ++TA HCV G +
Sbjct: 1782 QIVGGKVTEHGAWPWQVQI-GYKTMGHICGGSIVNSQWIVTAAHCVTTKPPGASRYTMYA 1840
Query: 301 --NLRVTVGTNE-WNSGGTEYTVARN--ITHPDFSLIYLKNDIGLLITDEEVKLSDAVRP 465
+L VT+G ++ + G+E + + HP ++ L DI LL + + + V
Sbjct: 1841 FSDLNVTLGEHQLYQLDGSEQNIPIEGIVVHPSYN--DLDYDIALLKLRQPITFNAYVSQ 1898
Query: 466 IKLSYDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEAC 600
+ L + +G P V+GWGRIG P S L + +D AC
Sbjct: 1899 VCLPQAALLAGTPCYVSGWGRIGESSPGSNVLQEASIPLVDQRAC 1943
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 67.7 bits (158), Expect = 7e-12
Identities = 54/145 (37%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Frame = +1
Query: 196 RIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNS-GGTEYT--VAR 366
R SFICGGSLVS V+TA HC+ AG + +V G + NS GTE T V R
Sbjct: 87 RSGSFICGGSLVSPTWVVTAAHCI----AGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKR 142
Query: 367 NITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKLSYDFVSSGVPVRVAGWGRIGHREP 546
ITHP ++ L NDI L+ V LSD VS G + GWG+I H
Sbjct: 143 IITHPTYNSPQLSNDIALIELSSPVPLSDRGHQ-------VSVGSKCFITGWGKIRHPGG 195
Query: 547 LSEKLLVIDVRTIDGEACVRAAAQA 621
L + + +AC + QA
Sbjct: 196 SHHILQQAMMPPLSQDACKKKVQQA 220
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 58 ACSALPTPEETDLSIFFEHADPNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVST 237
+C+ P T + P+ RIVGGT A G P L S F CGGSL+
Sbjct: 639 SCATRPPFPTTQAPVASCGVRPSTRIVGGTAAKQGDWPWQAQLRSTSGFPF-CGGSLIHP 697
Query: 238 RTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSG-GTEYTVARNITHPDF-SLIYLKND 411
+ VLTA HCV+ + +N+R+ N G + V + I HP + + L +D
Sbjct: 698 QWVLTATHCVS---SRRPTDLNIRLGAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHD 754
Query: 412 IGLL 423
I L+
Sbjct: 755 IALI 758
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 67.3 bits (157), Expect = 1e-11
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINL 306
+R++GG +A PG+ P + L S +FICGGSLVS+ V+TA HCV A
Sbjct: 475 SRVIGGKDAIPGAWPWQIALKSRG--NFICGGSLVSSTWVVTAAHCV----ARSSNPAQY 528
Query: 307 RVTVGTNEWN-SGGTEYT--VARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL 474
++ VG + N + TE T V + I HP ++ L NDI L+ KLS V P+ L
Sbjct: 529 QIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPVCL 587
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 66.1 bits (154), Expect = 2e-11
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFL-TSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHIN 303
+R+V G AA S P + L +GR ICGGSL++ VLTA HCV I
Sbjct: 79 SRVVNGDNAAQHSWPWQISLRVNGR---HICGGSLITPEWVLTAAHCVEDFPHPSAHRIK 135
Query: 304 LRVTVGTNEWNSGGTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL--S 477
R + E+ + + H DFS+ +LKND+ LL D ++ SD V + L
Sbjct: 136 ERSAIQQ--------EFRLTKLFKHKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPER 187
Query: 478 YDFVSSGVPVRVAGWGR-IGHREPLSEKLLVIDVRTIDGEACVR 606
G + GWGR +G +P SE L + AC R
Sbjct: 188 NSRAQVGAQCFITGWGRLVGGGQP-SEILQQAMLPVASHSACDR 230
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 65.7 bits (153), Expect = 3e-11
Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLR 309
RIVGG + G++P V + G CGGSL+S + VLTA HCV + +
Sbjct: 107 RIVGGHDTVKGAYPWHVLIRKGG--HVACGGSLISEKWVLTAAHCVTHRNGNILPRSRFQ 164
Query: 310 VTVGTNEWNSGGTEYTVARNI----THPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL- 474
V +G RNI THP F + D+ L+ D E +S+ VRPI L
Sbjct: 165 VQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPICLP 224
Query: 475 -SYDFVSSGVPVR---VAGWGR-IGHREPLSEKLL 564
+ D S P + GWG+ +G + +S K L
Sbjct: 225 ETDDQASLISPSKFGMAVGWGKTVGRQGDVSVKNL 259
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 64.1 bits (149), Expect = 9e-11
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRS----FICGGSLVSTRTVLTAGHCVAGVYA-GGIL 294
RI GG+++ PG +P V L +S F CGG+L++ VLTA HCV VY GI
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCV--VYKDSGIP 1217
Query: 295 HINLRVTVGTNEWNSGGTEYTV-----ARNITHPDFSLIYLKNDIGLLITDEEVKLSDAV 459
+ LRV +G ++ + + V A +HP FS +DI L+ + +++ V
Sbjct: 1218 YHGLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRFSWRTYDSDIALIRLRWKANITEYV 1277
Query: 460 RPIKLSYDFVSSGVPVR----VAGWGRIGHREPLSEKLLVIDVRTIDGEACVRA 609
RP+ L + V R + GWG ++ P S+ L V ++ AC +A
Sbjct: 1278 RPVCLPNGYQRRLVKPRAKGVMLGWGVTENKRP-SKTLKEAIVPVVNHNACKKA 1330
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 62.1 bits (144), Expect = 4e-10
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHI 300
P R++ G+EA G P +L FICGGSLV+ VLTA HC+ A
Sbjct: 28 PATRVISGSEALLGEWPWQAWLHLQHT-GFICGGSLVAPGWVLTAAHCILSDDAS----- 81
Query: 301 NLRVTVG-TNEWNSGGTE--YTVARNITHPDF-SLIYLKNDIGLLITDEEVKLSDAVRPI 468
+V +G + G+E VA I H + + + ND+ LL + +D V +
Sbjct: 82 KYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALLKLRDYPTKTDFVNTV 141
Query: 469 KLS--YDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEAC 600
L D V G + GWGR + P + KL D+R + AC
Sbjct: 142 CLPQYMDHVEIGKDCFITGWGRSYYPGPTANKLQQADLRVVSNRAC 187
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 62.1 bits (144), Expect = 4e-10
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHI 300
P +RIVGG+ A PG+ P V L R F CGG+LV+ V+TA HCV I +
Sbjct: 627 PLSRIVGGSTAPPGAWPWQVMLIYNSGRQF-CGGTLVTPEWVITAAHCVVDKNPASI-QV 684
Query: 301 NLRVTVGTNEWNSGGTEYTVARNITHPDF-SLIYLKNDIGLLITDEEVKLSDAVRPIKLS 477
L T+ S ++ HPD+ S NDI LL L+ + +
Sbjct: 685 RLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMP 744
Query: 478 YDFV--SSGVPVRVAGWGRI--GHREPLSEKLLVIDVRT 582
D V +G + GWG + G +P + V+ +RT
Sbjct: 745 NDTVHFPNGTMCYITGWGTLSSGGSQPEALNQAVVPLRT 783
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 60.5 bits (140), Expect = 1e-09
Identities = 49/141 (34%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFL-TSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHIN 303
+R+V G A S P + L +GR ICGGSL++ V+TA HCV
Sbjct: 30 SRVVNGDNAQQHSWPWQISLRVNGR---HICGGSLIAKDWVVTAAHCVDRNPTPS----G 82
Query: 304 LRVTVGTNEWNSGGTE----YTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIK 471
V VG + +G T + + + H FS+ +LKNDI LL E VK SD V +
Sbjct: 83 YTVVVGAHH-RTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVC 141
Query: 472 L--SYDFVSSGVPVRVAGWGR 528
L S +G + GWGR
Sbjct: 142 LPSSGSRAQAGARCYITGWGR 162
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 60.5 bits (140), Expect = 1e-09
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV---AGVYAGGIL-H 297
RIVGG A P L G + +CGGSL++ V+TA HC+ G ++
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTIVCGGSLINREWVVTAAHCIDRNNPSRTGCVVPD 491
Query: 298 INLRVTVGTNE-WNSGGTEY--TVARNITHPDFSLIYLKNDIGLL-ITDEEVKLSDAVRP 465
+RV +G ++ G E VA+ HPD+ I L ND+ L+ + + VRP
Sbjct: 492 PPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTFTKHVRP 551
Query: 466 IKL---SYDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEAC 600
+ L + ++ G V G+GR+G E LS +L + + C
Sbjct: 552 VCLPTSATPDLAVGTNCTVTGYGRVGENEDLSTQLRHATIPVLSVSEC 599
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 60.5 bits (140), Expect = 1e-09
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 6/138 (4%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLR 309
RI+ G++A P S P MV + CGG+LVS + V+TA HCV V + L
Sbjct: 351 RIISGSDAQPNSWPWMVQINYNN--GHHCGGTLVSPQWVVTAAHCVDHV-KDPKNYNELA 407
Query: 310 VTVGTNEWN-SGGTE--YTVARNITHPD-FSLIYLKNDIGLLITDEEVKLSDAVRPIKL- 474
+T+G ++ + S GTE ++VAR I HP F + NDI L+ ++ +L+ V L
Sbjct: 408 ITLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLACLP 467
Query: 475 -SYDFVSSGVPVRVAGWG 525
+ +S G GWG
Sbjct: 468 RQGEELSDGKICYATGWG 485
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 60.1 bits (139), Expect = 1e-09
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Frame = +1
Query: 133 IVGGTEAAPGSHPHMVFLT-SGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLR 309
I+GG A G P V + + ICGG+++S VLTA HCV A N++
Sbjct: 546 IMGGANAEHGEWPWQVSMKLNSSSLPHICGGNVISPWWVLTAAHCVQDERAS-----NIK 600
Query: 310 VTVGTNEW---NSGGTEYT--VARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL 474
+T+G EW N GTE V R I+H ++S + D LL + + V+P+ L
Sbjct: 601 LTMG--EWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL 658
Query: 475 SYDFVSSGVPVRVAGWGRIGHR-EPLSEKLLVIDVRTIDGEAC 600
+G V GWG +R P L + + ++ C
Sbjct: 659 PDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQC 701
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 60.1 bits (139), Expect = 1e-09
Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGIL---H 297
+RIVGGTEA P L CGGSL+ VLTA HC+ G L H
Sbjct: 28 SRIVGGTEAPINGWPWQAMLLRSPNGDQFCGGSLIDPGWVLTAAHCLVGEQPDSALLGAH 87
Query: 298 INLRVTVGTNEWNSGGTEYTVARNITHPDF-SLIYLKNDIGLLITDEEVKLSDAVRPIKL 474
TVGT + + VA+ I H ++ S I + NDI LL + L + V + L
Sbjct: 88 YRSNKTVGTEK------DIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCL 141
Query: 475 SYDFVSSGVPV------RVAGWGRIGHREPLSEKLLVIDVRTIDGEAC 600
+ + ++ +PV + GWG + ++L+ V + C
Sbjct: 142 ANN--NTHLPVDEFGKCYITGWGSLSSGGAAPDRLMQASVPLVSKSRC 187
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 59.3 bits (137), Expect = 3e-09
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHI 300
P ARIV G EA S P + L GR CG +L+ +TA HCV +
Sbjct: 322 PGARIVNGQEAVSHSWPWIASLRKGRSNYHTCGATLIRPGWAITAAHCV-------MRPD 374
Query: 301 NLRVTVGTNEWNS---GGTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIK 471
V VG++ ++ V R H FS+ +DI LL + ++D V
Sbjct: 375 KYTVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALLELERSAVINDKVSTAC 434
Query: 472 LSYDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEACVRA 609
L G +AGWGR+ ++ L V + E C RA
Sbjct: 435 LPSGEPKVGAICYIAGWGRLQSLGDVALTLQQAKVPIVSKEDCKRA 480
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTS-GRIRSFICGGSLVSTRTVLTAGHCV 267
P AR++ G A P S P + L GR S CGG+L+S R V+TA HCV
Sbjct: 26 PGARVINGQNAQPHSWPWQISLRPYGRYHS--CGGTLISDRWVVTASHCV 73
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 115 ADPNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGIL 294
A P+ RIVGGT+A PG+ P L S F CGG+LV + V+TA HC VY G
Sbjct: 134 AKPHTRIVGGTKAPPGAWPWQAMLRSNYGGQF-CGGTLVHPQWVITAAHC---VYRRGPN 189
Query: 295 HINLRVTVGTNEWNSG-GTEYTVARNITHPDF 387
+R+ + + G +++++R ITHP +
Sbjct: 190 DFKIRMGAHFRKGDYGTEQDFSLSRVITHPSY 221
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 57.2 bits (132), Expect = 1e-08
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 7/174 (4%)
Frame = +1
Query: 106 FEHADPNARIVGGTEAAPGSHPHM--VFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVY 279
F +P +RI+GGT AAP P + + + + CGG+L+ T V+TA HCV
Sbjct: 276 FTSEEPMSRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCV---- 331
Query: 280 AGGILHINLRVTVGTNEWNSGGTEYTVARNITHPDFSLI---YLKNDIGLLITDEEVKLS 450
I N ++ +G ++ S T+ H + DI ++ +
Sbjct: 332 FQNIEPSNYKIKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANPAPIG 391
Query: 451 DAVRPIKLS--YDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEACVR 606
+ P L YD V+SG V GWG + + L + + E C R
Sbjct: 392 HTISPACLPGLYDQVTSGTMCYVTGWGMTEYGNAGARLLQQARIPVVSSEECER 445
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 56.0 bits (129), Expect = 2e-08
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHP-HMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILH 297
P RIV G +A P S P + F G S ICG SL++ LTA HC+
Sbjct: 237 PPLRIVNGEDAVPHSWPWQLSFRYKG---SHICGASLLTPGWALTAAHCLTLSDDAS--- 290
Query: 298 INLRVTVGTNEWNSGGTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL 474
+ + G ++ + G + +++ H FS+++++ND+ LL V+LSD V I L
Sbjct: 291 -DYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALLKLSTYVQLSDKVGTICL 348
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 55.6 bits (128), Expect = 3e-08
Identities = 52/173 (30%), Positives = 68/173 (39%), Gaps = 9/173 (5%)
Frame = +1
Query: 109 EHADPNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV-AGVYAG 285
E+ P RIVGG EA+P S P V L R CGGSL+ + V+T+GHC YA
Sbjct: 242 ENNKPQPRIVGGREASPNSWPWQVDLVVNGTRHN-CGGSLIDKQWVVTSGHCFDQRPYAY 300
Query: 286 -GILHINLRVTVGTNEWNSGGTEYTVARNI-THPDFSLIYL----KNDIGLLITDEEVKL 447
+ + R+ G E + HP + L L DI L+
Sbjct: 301 IPLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVF 360
Query: 448 SDAVRPIKLSYDFVS--SGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEAC 600
V + L S G V GWGR E S+ L VR + + C
Sbjct: 361 YKRVHSVCLPEKSWSPPDGAGCYVTGWGRTAENEGYSDVLREAQVRLVSRDTC 413
Score = 31.9 bits (69), Expect = 0.44
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 7/148 (4%)
Frame = +1
Query: 178 VFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSGGTEYT 357
+ L + + + CGGSL+ +LT+ HC Y +R+ G E
Sbjct: 3 IILKTPNLTTHYCGGSLIDPYWILTSSHCF-WTYNNISTQFEIRLGEHDERRIEGYEEII 61
Query: 358 VARNI-THPDFSLIYLKN----DIGLLITDEEVKLSDAVRPIKLS--YDFVSSGVPVRVA 516
+ HP + L + D+ L+ V + L +++G V
Sbjct: 62 QGDQLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFVT 121
Query: 517 GWGRIGHREPLSEKLLVIDVRTIDGEAC 600
GWG+ P S L ++V + E C
Sbjct: 122 GWGKTAEGSPYSPVLNELEVDIVSKEVC 149
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGI-LH 297
PN RIVGGT A G P L + + CGGSL++ + +LTA HCV A I +
Sbjct: 7 PNTRIVGGTAAKHGDWPWQAQLRTTSGFPY-CGGSLIAPQWILTATHCVERKQASSIVIR 65
Query: 298 INLR---VTVGTNEWNSGGTEYTVARNITHPDF-SLIYLKNDIGLLITDEEV 441
+ R TVGT + +Y V + ITHP + +DI LL D+ V
Sbjct: 66 LGARRRVATVGTEK------DYIVTKVITHPSYHKPKTYSHDIALLKLDKPV 111
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 54.8 bits (126), Expect = 5e-08
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Frame = +1
Query: 109 EHADPNARIVGGTEAAPGSHPHMVFL-TSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAG 285
+ +D RIVGG EA G+ P + + G SF CGG+L++ V+TA HC Y G
Sbjct: 716 DSSDKRFRIVGGREAKAGAWPWLAAIYVKG---SFRCGGALIARDWVVTAAHCF--YYDG 770
Query: 286 GILHINLRVTVGTNEWN-SGGTEYTV-ARN-ITHPDFSLIYLKNDIGLLITDEEVKLSDA 456
I+ ++ V +G ++ G+E V A N + HP + L D+ L+ VKL+
Sbjct: 771 KIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALIQLKGGVKLTAY 830
Query: 457 VRPIKLSYD----FVSSGVPVRVAGWG 525
VR + L V G VAGWG
Sbjct: 831 VRTVCLPQPTDAILVRPGSVGIVAGWG 857
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 54.4 bits (125), Expect = 7e-08
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHI 300
P+ RIVGGT A + P L S F CGG+LV R V+TA HC+ L I
Sbjct: 20 PSTRIVGGTAAPKNAWPWQAQLRSASGFPF-CGGTLVHPRFVVTASHCI-DKKTPSSLRI 77
Query: 301 NLRVTVGTNEWNSGGTEYTVARNITHPDFS-LIYLKNDIGLLITDEEVKLSDAV 459
L S ++ V R I H +S + L NDI ++ +E +L+ AV
Sbjct: 78 RLGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEPARLNRAV 131
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 51.6 bits (118), Expect = 5e-07
Identities = 38/115 (33%), Positives = 54/115 (46%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLR 309
RI+ G EA P S P + L S CG SL+S LTA HCV + L
Sbjct: 85 RIINGEEAVPNSWPWQLSLRV--YGSHNCGASLLSPGWALTAAHCVQR--SSNPADYTLA 140
Query: 310 VTVGTNEWNSGGTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL 474
++ V++ I+H +FS+ +L+ND+ LL V+LSD + I L
Sbjct: 141 AGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLLRLSAPVQLSDKIGTICL 195
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 51.2 bits (117), Expect = 7e-07
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Frame = +1
Query: 124 NARIVGGTEAAPGSHPHMVFLT--SGRIRS--FICGGSLVSTRTVLTAGHCVAGVYAGGI 291
N RIVGGT A G+ P + + ++ ICGGS+V+ ++TA HC A Y+
Sbjct: 101 NTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFA--YSKDA 158
Query: 292 LHINLRVTVGTNEWN-SGGTEY--TVARNITHPDFSLIYLKN-DIGLLITDEEVKLSDAV 459
+ + VG ++ N + G E V R I HP ++ + D+ L+ ++ +D V
Sbjct: 159 K--DYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRV 216
Query: 460 RPIKLS--YDFVSSGVPVRVAGWGRI 531
RP+ L + + ++GWG +
Sbjct: 217 RPVCLPSLKEDLEENTQCYISGWGHL 242
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRS-FICGGSLVSTRTVLTAGHCVAG 273
AR++GG +AAP S P + L R+R +CGG+L+S VLTAGHCV G
Sbjct: 434 ARVIGGEDAAPHSWPWQISL---RVRGKHMCGGTLISPDWVLTAGHCVHG 480
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV 267
ARI+ G A P S P + L GR R +CGG+L+S R V+TA HC+
Sbjct: 844 ARIINGQNAQPHSWPWQISLRQGR-RFHLCGGALISDRWVVTASHCI 889
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV 267
P +R++GG A P S P V ++ G++ S CGG+L+S++ V+TA HCV
Sbjct: 473 PMSRVIGGEAARPYSWPWQVSVSMGKLHS--CGGALISSKWVITAAHCV 519
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 49.6 bits (113), Expect = 2e-06
Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Frame = +1
Query: 34 LIFCTAFIACSALPTPEETDLSIFFEHADPNARIVGGTEAAPGSHPHMVFLTSGRIR-SF 210
+I AF+ C P E S D RIVGG EA P S P V + R++ S
Sbjct: 1 MIGSIAFVLCVLGVAPSEA--SSCGRRPD-GVRIVGGDEAVPHSWPWQVSI---RLKGSH 54
Query: 211 ICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSGGTEYTVARNITHPDF- 387
ICGGSL+S +LTA HCV + + + V VG ++ GTE+ ++ H +
Sbjct: 55 ICGGSLLSPLWLLTAAHCV--IRSNN--SADYTVIVGAHKRVLDGTEHKLSTFYKHEKYV 110
Query: 388 SLIYLKNDIGLLITDEEVKLSDAVRPIKL 474
K+D+ L+ + S V P+ L
Sbjct: 111 GGKDKKHDLALIKLAKPATFSTKVSPVCL 139
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 48.8 bits (111), Expect = 4e-06
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPH---MVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGI 291
P +RIVGG +A G P ++F T + F CGG+LV V+TA HC+ +
Sbjct: 207 PASRIVGGNDAMHGEWPWQAMLMFQTPLGYKQF-CGGALVHEDWVVTASHCINDIRPED- 264
Query: 292 LHINLRVTVGTNEWNSGGTEYT--VARNITHPDFSLI--YLKNDIGLLITDEEVKLSDAV 459
++ G N+ E +A+ H D++L ND+ L+ + + V
Sbjct: 265 YKTHIISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYV 324
Query: 460 RPIKLSYDFVS--SGVPVRVAGWGRIGHREPLSEKLL 564
+P+ L+ VS G + GWGR+ H S ++L
Sbjct: 325 QPVCLADGTVSFPPGTECWITGWGRL-HSGGASPEIL 360
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 48.8 bits (111), Expect = 4e-06
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINL 306
ARI+ G A P S P + L GR CGGSL+S R V+TA HC+ G
Sbjct: 104 ARIINGQNAQPHSWPWQISLR-GRSGFHTCGGSLISDRWVVTAAHCIHRNKNPG----GY 158
Query: 307 RVTVGTNEWNSGGT----EYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDA 456
V VG ++ G T +++ I HP ++ + NDI LL V+ A
Sbjct: 159 TVVVGAHK-KRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSA 211
Score = 46.4 bits (105), Expect = 2e-05
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV-AGVYAGGILHI- 300
ARI+ G A P S P + L GR CGGSL+S R V+TA + GG +
Sbjct: 427 ARIINGQNAQPHSWPWQISLR-GRSGFHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPG 485
Query: 301 NLRVTVGTNEWNSGGT----EYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDA--VR 462
V VG ++ G T +++ I HP ++ + NDI LL V+ A V
Sbjct: 486 GYTVVVGAHK-KRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVG 544
Query: 463 PIKLSYDFVSSGVPVRVAGWGRI 531
+ L+ + G + GWG I
Sbjct: 545 TVCLTDQRPAPGKRCYITGWGAI 567
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/99 (31%), Positives = 48/99 (48%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINL 306
+RIVGG A PG P L + + CGGSL+ + VLTA HC++ ++ + L
Sbjct: 389 SRIVGGAAANPGDWPWQAQLRTTTGFPY-CGGSLIHSNWVLTAAHCISSKRPAEVV-VRL 446
Query: 307 RVTVGTNEWNSGGTEYTVARNITHPDFSLIYLKNDIGLL 423
+ + V+ ITH +++ + NDI LL
Sbjct: 447 GAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALL 485
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +1
Query: 124 NARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHIN 303
++R+V G +A G P +L F+CGGSL++ + VLTAGHC+
Sbjct: 59 SSRVVSGDDATLGEWPWQAWLHVTP-HGFVCGGSLIAPQWVLTAGHCILTEDPE-----K 112
Query: 304 LRVTVG-TNEWNSGGTE--YTVARNITHPDFSL-IYLKNDIGLL 423
RV +G + + G+E + V R I HP +S + ND+ LL
Sbjct: 113 YRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALL 156
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 47.2 bits (107), Expect = 1e-05
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 15/175 (8%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMV--FLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGIL 294
P +RIVGG EA S P V L + + + CGGSL+ +LT+ HC + +
Sbjct: 242 PESRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHC---FWTYNNI 298
Query: 295 HINLRVTVGTNEWNSGGTEYTVARNITHPDFSLIYLKNDIGLLIT--DEEVKLSDAVRPI 468
+ +G ++ +Y I D I+ +G LI+ D +V L RP
Sbjct: 299 STQFEIRLGEHDVR----KYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIKLKRPA 354
Query: 469 ---KLSYDF--------VSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEAC 600
K Y +++G V GWG+ P S L ++V + E C
Sbjct: 355 VFHKCVYSVCLPSVTANLTTGTKCYVTGWGKTAEGSPYSLVLNEVEVDIVSKEVC 409
Score = 45.6 bits (103), Expect = 3e-05
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Frame = +1
Query: 214 CGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSGGTEYTVARNI-THPDFS 390
CGGS++ V+TAGHCV I LR + G +Y + I HP F
Sbjct: 10 CGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHPGFV 69
Query: 391 LIYLKN----DIGLLITDEEVKLSDAVRPIKLSYDFVS--SGVPVRVAGWG 525
+ + + DI LL + ++ SD ++PI L D +G + GWG
Sbjct: 70 IGGVSHPGYYDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYLTGWG 120
Score = 36.7 bits (81), Expect = 0.015
Identities = 37/138 (26%), Positives = 51/138 (36%), Gaps = 9/138 (6%)
Frame = +1
Query: 214 CGGSLVSTRTVLTAGHCV-AGVYAG-GILHINLRVTVGTNEWNSGGTEYTVARNI-THPD 384
CGGSL+ + V+T+GHC YA + + R+ G E + HP
Sbjct: 561 CGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHPK 620
Query: 385 FSLIYL----KNDIGLLITDEEVKLSDAVRPIKLSYDFVS--SGVPVRVAGWGRIGHREP 546
+ L L DI L+ V + L S G V GWGR E
Sbjct: 621 YKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGRTAENEG 680
Query: 547 LSEKLLVIDVRTIDGEAC 600
S+ L VR + + C
Sbjct: 681 YSDVLREAQVRLVSRDTC 698
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHI 300
P+ RIVGGT A S P L + + CGGSL+ + +LTA HCV+G A I+
Sbjct: 50 PHTRIVGGTAAKQNSWPWQAQLRTTSGFPY-CGGSLIHPQWILTATHCVSGKSASSIVIR 108
Query: 301 NLRV 312
N+ +
Sbjct: 109 NVNL 112
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 46.4 bits (105), Expect = 2e-05
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 3/160 (1%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLR 309
RIVGG EAAPG+ P V L + CGGSLV+ V+TA HC +++ + +
Sbjct: 53 RIVGGVEAAPGAWPWQVALLMNGTQ--FCGGSLVNENWVVTARHCFHELWS-SMDTASWT 109
Query: 310 VTVGTNEW-NSGGTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKLSYDF 486
++G + S G E + N S I LL + KL + V PI L D
Sbjct: 110 ASLGEHHLVTSEGFEQSSRSNA----LSFTQRTTWITLLRLAKPAKLDEYVSPICLLPDG 165
Query: 487 VSS--GVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEAC 600
+ GWG+ + + V+ + E C
Sbjct: 166 FEFPWAKECYITGWGKTEFEGTKPQVIREATVKLVPPEIC 205
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFI--CGGSLVSTRTVLTAGHCV 267
R+V G+E P S P V L R SF+ CGG+L+ V+TA HCV
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCV 90
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 44.4 bits (100), Expect = 8e-05
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Frame = +1
Query: 163 SHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSG 342
S P V LT CGG+L++ VLTA HC + + V+ +
Sbjct: 1249 SWPWQVALTLSGNPVQRCGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVS-DMRRRDGK 1307
Query: 343 GTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL-SYDFVSSGVPVRVAG 519
G ++ HP ++ ++D+ +L + + + V PI + + + V +G VAG
Sbjct: 1308 GQSLSIKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICIVANEEVQAGRACAVAG 1367
Query: 520 WGRIGHREPLSEKLLVIDVRTIDGEACVRAAAQAAI 627
WG+ + LL +R I C AAAQ+ +
Sbjct: 1368 WGQSYLPRITTIPLLTRRMRVIGRTDC--AAAQSRV 1401
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Frame = +1
Query: 211 ICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSGGTEYTVARNITHPDF- 387
ICGGSL+S+ VLTA HCV + + V VG ++ GTE+ ++ H +
Sbjct: 339 ICGGSLLSSTWVLTAAHCVIRSHNTS----DYTVIVGAHKRVLDGTEHKLSAFYKHEKYV 394
Query: 388 SLIYLKNDIGLLITDEEVKLSDAVRPIKL--SYDFVSSGVPVRVAGWGRIGHREP--LSE 555
K+D+ L+ + S V P+ L D + + GWGR+ ++
Sbjct: 395 GGKDKKHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKNCYTTGWGRVSGSMMFFMAT 454
Query: 556 KLLVIDVRTIDGEAC 600
KL +D E C
Sbjct: 455 KLQQARTPVVDHETC 469
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV 267
RIVGGTEA P L S F CGGSL+ VLTA HC+
Sbjct: 259 RIVGGTEAPVNGWPWQAMLRSAGGSQF-CGGSLIHPEWVLTAAHCL 303
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/46 (50%), Positives = 25/46 (54%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV 267
RIVGGTEA P L S F CGGSL+ VLTA HC+
Sbjct: 219 RIVGGTEAPVNGWPWQAMLRSAGGSQF-CGGSLIHPEWVLTAAHCL 263
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMV----FLTSGRIRSFICGGSLVSTRTVLTAGHC 264
ARIVGG EA G+ P V F SG + ICGG+L++ VLTA HC
Sbjct: 125 ARIVGGNEAGHGTWPWQVGIYRFDHSGN-QMQICGGALINREWVLTAAHC 173
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRS---FICGGSLVSTRTVLTAGHCVAGVYAGGILH 297
+R++ G +A + P + L + CGGSL+ + VLTA HCVAG+
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIRNPR--- 92
Query: 298 INLRVTVGTNEWNSGGTE----YTVARNITHPDFSLIYLKNDIGLLITDEEVKLS 450
V VG +E + G T+ ++++ +H +S L +D+ L+ + ++S
Sbjct: 93 -RYSVYVGAHELD-GTTQVEEKISISKIYSHEKYSSSLLTSDVALIKLSKAYRVS 145
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLR 309
RIVGG ++ G P V L + +C GSL+ R ++TAGHC + +
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLNDRQ--VCAGSLIEARWIITAGHCFKDPRSSADPD-KWK 109
Query: 310 VTVGTNEWNSGGTEY----TVARNITHPDFSLIYLKND 411
V +G +S + V R I HP F+ ++ D
Sbjct: 110 VLLGERRRHSSKRHFERAQQVKRIIVHPKFNGKFVNGD 147
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 39.1 bits (87), Expect = 0.003
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 10/176 (5%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAG------VYAGGI 291
RI+GG + HP MV + ++ CGGSLV ++TA HC V AG
Sbjct: 40 RIMGGQRSTIEQHPWMVAMMLDSAQA--CGGSLVPEDWIVTAAHCFDSNRLRWRVVAGND 97
Query: 292 LHINLRVTVGTNE-WNSGGTEYTVARNITHP-DFSLIYLKNDIGLLITDEEVKLSDAVR- 462
+ T G + W + +A + P D+ + +K + + T + V + R
Sbjct: 98 MPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTVPICLVPRD 157
Query: 463 -PIKLSYDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEACVRAAAQAAI 627
P L D VAGWGR S L + V + E C A + +
Sbjct: 158 TPRDLKRD-------CYVAGWGRRSFGGEQSLALREVQVHMVPRELCNSANSYGGV 206
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 124 NARIVGGTEAAPGSHPHMVFL-TSGRIRSFICGGSLVSTRTVLTAGHCV 267
++R+V G A + P + L T+G+ ICGGSL++ VLTA HCV
Sbjct: 35 SSRVVNGANAPQHAWPWQISLRTNGQ---HICGGSLITPEWVLTAAHCV 80
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHC 264
R+VGG EA G P + L R + CGG+LV R V+T HC
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQQ--YCGGALVHERWVVTGAHC 70
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Frame = +1
Query: 133 IVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRV 312
+VG T + P P + + R F C G L+S R V+TA HC + + + L
Sbjct: 1088 LVGATPSPPEDWPWQTMILNRRRFPF-CSGVLISARHVITAAHCFDRIIRTDQIIVRLGA 1146
Query: 313 TV---GTNEWNSGG---TEYTVARNITHPDFSL-IYLKNDIGLL 423
+ G +W G E VA HP + NDI +L
Sbjct: 1147 YIARSGRLDWGMGSRWEQEIAVAAIHKHPSYQAPTRWANDIAVL 1190
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHM--VFLTSGRIRSFICGGSLVSTRTVLTAGHC 264
RIVGG E+A G+ P +FL R CGGS++ ++ V+TA HC
Sbjct: 26 RIVGGIESANGAWPWQAALFLNGTHHR---CGGSVIKSQWVVTAAHC 69
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 343 GTE--YTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKLSYDFVSSGVPVR-- 510
GTE +TV + I HP++ +D+ LL L+ AV I L + S V
Sbjct: 1398 GTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVGKNCY 1457
Query: 511 VAGWGRIGHREPLSEKLLVIDVRTIDGEACVRA 609
+ GWGR G+ P + L + + + C A
Sbjct: 1458 ITGWGRTGYNRPGASVLQEAMMPIVSQQTCAAA 1490
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHC 264
+ I+GGT+AA G P V L +CGG+L+++ VLTA C
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTHYGP-VCGGTLLTSEWVLTAARC 300
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 33.9 bits (74), Expect = 0.11
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Frame = +1
Query: 262 CVAGVYAGGILHINLRVTVGTNEW---NSGGTEYT--VARNITHPDFSLIYLKNDIGLLI 426
CV G +++ +TV EW N GTE V R I+H ++S + D LL
Sbjct: 335 CVPYNAVGKGVNVTTVLTV-LGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLK 393
Query: 427 TDEEVKLSDAVRPIKLSYDFVSSGVPVRVAGWGRIGHR-EPLSEKLLVIDVRTIDGEAC 600
+ + V+P+ L +G V GWG +R P L + + ++ C
Sbjct: 394 LTRPLNFTQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQC 452
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +1
Query: 376 HPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKL-----SYDFVSSGVPVRVAGWG-RIGH 537
HP +S +DI L+ + V +D V+PI L Y + + V ++GWG R
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKLW 258
Query: 538 REPLSEKLLVIDVRTIDGEACVRA 609
R+ ++ +L V +D + C +A
Sbjct: 259 RDRVANRLHEATVPIVDIQTCRKA 282
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.3 bits (70), Expect = 0.33
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 370 ITHPDF-SLIYLKNDIGLLITDEEVKLSDAVRPIKLSYD---FVSSGVPVRVAGWG 525
I HP+F SL NDI L+ VKL +VR I L + +S G VAGWG
Sbjct: 85 ILHPNFKSLQTFYNDIALVKLRTRVKLGPSVRTICLPHKGEALLSPGKYGFVAGWG 140
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 214 CGGSLVSTRTVLTAGHCV 267
C G+L+STR VLT+ HCV
Sbjct: 179 CTGTLISTRHVLTSAHCV 196
>SB_47036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 212 SVEDRWCRHAPYSQLDIVWPVYMRAEFCTSTSASPSV 322
+V+ WCRH + WP YM+A + + PS+
Sbjct: 29 AVDSNWCRHYSGQGYCLKWPDYMKAHCKKTCNMCPSL 65
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 406 NDIGLLITDEEVKLSDAVRPIKLSY--DFVSSGVPVRVAGWGRIGHRE-PLSEKL 561
NDI L+ + V+ S VRPI L V G + GWG+ H + +S+KL
Sbjct: 206 NDIALIQLKKRVRRSRLVRPICLPRVGQEVEIGTKCYMTGWGKRNHGDADMSKKL 260
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 214 CGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNS---GGTEYTVARNITHPD 384
C G LV + VLTA HCVA L + G W S + +N D
Sbjct: 124 CTGVLVGPKHVLTAAHCVANEKPHN-LKVGFLQRNGMMNWYSVSRFAMSHKWRKNDIASD 182
Query: 385 FSLIYLKNDIGL 420
++LI L + GL
Sbjct: 183 YALIVLNSSPGL 194
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 121 PNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCV 267
P++RI T A + P F S ++ S C G+L+S + VLT+ HCV
Sbjct: 141 PDSRIRVNTTLAAHTFP---FSASVKL-STGCSGTLISRQHVLTSAHCV 185
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 130 RIVGGTEAAPGSHPHMVFLT-SGRIRSFICGGSLVSTRTVLTAGHCV 267
RIVGG +A + P + R R+F+ G+L+ +R VLT + V
Sbjct: 92 RIVGGKISAKAAWPWQAAIYYKDRGRNFLFNGALIKSRWVLTVANAV 138
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = +1
Query: 511 VAGWG-----RIGHRE-PLSEKLLVIDVRTIDGEACVRAA 612
VAGWG R+G+ PLS KLL + V + E C RA+
Sbjct: 277 VAGWGTTRKIRLGYPVGPLSAKLLQVTVPIVSNEECKRAS 316
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 214 CGGSLVSTRTVLTAGHCV 267
C G+LVS R VLTA HC+
Sbjct: 168 CTGTLVSPRHVLTAAHCL 185
>SB_35887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -2
Query: 626 MAAWAAALTQASPSIVLTSITKSFSESGSRCPILPHPATLTGTPLDTKS*LNLMGRTASD 447
MA A +T+A S++++ +T + P P L T D K + L G S
Sbjct: 654 MACRAVPVTKAPSSLMISHVTIKGEGAHENQTTTPTPHNLKCTVTDPKDGVTLNGGLKSG 713
Query: 446 NFT 438
NFT
Sbjct: 714 NFT 716
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +1
Query: 358 VARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKLSYDFVSSG-VPVR----VAGW 522
V + + +P F+ + +NDI LL + V + V P+ L V++G VPV + GW
Sbjct: 17 VKKLVYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPP--VNAGKVPVGKNCFITGW 74
Query: 523 GRI 531
GR+
Sbjct: 75 GRV 77
>SB_8506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 385 FSLIYLKNDIGLLITDEEVKLSDAVRPIKLSYDFVSSGVPVRVAGWGRIGHREPLSEKLL 564
+ L L + + + + SDA RP +DF +G+P VA W + + ++
Sbjct: 21 YELFELAQTLRIRPRTDSIGGSDAQRPSLKVFDFHPAGLPCSVAWWHT---ADDFNMCIV 77
Query: 565 VIDVRTIDGEA 597
++ T+ GEA
Sbjct: 78 GTEISTVSGEA 88
>SB_59789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 340 GGTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSD 453
G T + I H FS+ +L+NDI L+ + V LS+
Sbjct: 11 GQTPIAIHEVIKHESFSMRHLRNDIALIRLVKPVTLSE 48
>SB_56271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 246 YGACRHQRSSTDETPDSSAGQKNHVGVAPWSSFGPS 139
YG RH++ + P+++ G KN +A S GPS
Sbjct: 455 YGEWRHKKPGFEWRPEAAWGPKNSGSLAKEPSTGPS 490
>SB_52479| Best HMM Match : Laminin_B (HMM E-Value=2.2)
Length = 465
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 116 PIQMPVSSEGPKLLQGATPTWFF*PADESG 205
P+Q+P E P Q A PT + P ++SG
Sbjct: 123 PVQLPCYVENPLTTQVAIPTTYLAPFNQSG 152
>SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 304 LRVTVGTNEWNSGGTEY--TVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKLS 477
+R T+ EW+ T Y + F+ Y+ D I +E+ KLS+ VR ++ +
Sbjct: 144 IRDTMLPGEWDVCVTSYEMVIREKAVFKKFAWRYIVIDEAHRIKNEKSKLSEIVRELRSA 203
Query: 478 YDFVSSGVPVR 510
+ +G P++
Sbjct: 204 NRLLLTGTPLQ 214
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 290 FCTSTSAS--PSVRTSGTLAVP-NTPW 361
+C+S S P RTSGTL P N PW
Sbjct: 1591 WCSSEDGSETPGTRTSGTLRCPANAPW 1617
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 149 SVPPTIRAFGSACSKKMDKSVSSGVGSAEHAMNAVQKI 36
+ P T + C KK KSV V SAE + +K+
Sbjct: 81 TTPITCSCSSNCCRKKYSKSVQDNVDSAESSTTGGEKV 118
>SB_39648| Best HMM Match : DUF1110 (HMM E-Value=1.7)
Length = 472
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 200 SGVSSVEDRWCRHAPYSQLDIVWPVYMRAEFCTSTSASPS 319
SGV V R+C S + +VW V RA FC S S
Sbjct: 81 SGVWRVRVRFCVECDVSSIAVVWRV--RARFCVECLVSIS 118
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 114 RRSKCPYRRRDRSCSREPPPH 176
RRS+ P ++ RS SR PP H
Sbjct: 76 RRSRSPNKKHSRSKSRTPPRH 96
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -2
Query: 218 PQMKLLIRPLVRKTMWGWLPGAASVPPTIRAFGSACSKKMDKSVSSG 78
P M + + P + + M+G +PG A P G A + + + SG
Sbjct: 786 PMMGMGMNPFMAQQMYGGMPGGAPYFPQQSTNGMAAQQPLGEQEDSG 832
>SB_4004| Best HMM Match : PSS (HMM E-Value=1.7e-10)
Length = 283
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -1
Query: 609 GPDTG-LTVNCSHVDHQKLFG 550
GPDT VNCSH+ Q+L+G
Sbjct: 187 GPDTEEYAVNCSHITVQRLWG 207
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,938,563
Number of Sequences: 59808
Number of extensions: 516175
Number of successful extensions: 1940
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -