Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d02f
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    56   2e-08
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    52   3e-07
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    33   0.17 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    32   0.29 
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    32   0.29 
Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical pr...    31   0.51 
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    31   0.67 
Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z49074-3|CAA88894.1|  176|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z48583-6|CAA88474.1|  176|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U67954-2|AAB52606.1|  168|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   3.6  
Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical p...    28   4.8  
AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    27   8.3  
AF125463-5|AAD12866.1|  317|Caenorhabditis elegans Hypothetical ...    27   8.3  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
 Frame = +1

Query: 130 RIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLR 309
           R++GG+E++P S P  V L S R+    CGGSL+    VLTA HC    +A      +  
Sbjct: 57  RLIGGSESSPHSWPWTVQLLS-RLGHHRCGGSLIDPNFVLTAAHC----FAKDRRPTSYS 111

Query: 310 VTVGTNEWNSGGTEYTVARNITHPDFSLIYLKN-DIGLLITDEEVKLSDAVRPIKL-SYD 483
           V VG +   SG      A +I HP +++ +  + D  ++     V  S   RPI L S  
Sbjct: 112 VRVGGHRSGSGSPHRVTAVSI-HPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLP 170

Query: 484 FVSSGVPVRVAGWG 525
            V + + V V GWG
Sbjct: 171 AVENRLCV-VTGWG 183


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
 Frame = +1

Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINL 306
           AR+VGG E  PG+ P    L +   ++  CG S++    ++TA HC    +       + 
Sbjct: 25  ARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHC----FEEDERVSSY 80

Query: 307 RVTVGTNEWNSGGTE-----YTVARNITHPDFSLIYLKNDIGLL-ITDEEVKLSDAVRPI 468
            V VG  +W++  T+     + + R   +P +  I+  +DI +L I    ++ ++  +PI
Sbjct: 81  EVVVG--DWDNNQTDGNEQIFYLQRIHFYPLYKDIF-SHDIAILEIPYPGIEFNEYAQPI 137

Query: 469 KL-SYDFV-SSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEACVRAA 612
            L S DFV + G    V+GWG +G R   +E+L    +  I+   CV ++
Sbjct: 138 CLPSKDFVYTPGRQCVVSGWGSMGLR--YAERLQAALIPIINRFDCVNSS 185


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
 Frame = +1

Query: 22  VKRLLIFCTAFIA--CSALPTPEETDLSIFFEHADPNARIVGGTEAAPGSHPHMVFLTSG 195
           +   L+ C  FI    +A+   EE+   IF      + RI+GG     G++     ++ G
Sbjct: 5   IYHFLVLCFVFITKHSNAINLCEESYKPIF------SFRIIGGNSIDDGANWMAKLVSYG 58

Query: 196 -RIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSGGTEYTVARNI 372
              +  +CG +++    ++TA HC   +     +++           N+    ++V    
Sbjct: 59  DNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYVR-------EPKNNRERSFSVKEAY 111

Query: 373 THPDFSLIYLKNDIGLL-ITDEEVKLSDAVRPIKLSYD 483
            H  ++     NDI LL I+ +  KL   ++P+ L +D
Sbjct: 112 IHSGYNNQTADNDIALLRISSDLSKL--GIKPVCLVHD 147


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +1

Query: 211 ICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVG---TNEWNSGGTEY 354
           +CGG L++   V+T+ HC   V++G    +  +VT+G    N+ + G  E+
Sbjct: 45  VCGGVLIAPSIVITSAHC---VFSGDDFAVTAKVTLGDVHLNKHDDGEQEF 92


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 124 NARIVGGTEAAPGSHPHMVFL---TSGRIRSFICGGSLVSTRTVLTAGHCVAG 273
           +A++  G +A+    P  VF    +     +  C G++VS R +L A HC AG
Sbjct: 160 SAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAG 212


>Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical
           protein M05B5.3 protein.
          Length = 403

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 25/67 (37%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = -2

Query: 287 PPAYTPATQCPAVSTVRVDTSDP--PQMKLLIRPLVRKTMWGWLPGAASVPPTIRAFGSA 114
           PP+ TP T     STV   TSDP  P            T     P A+S PPT  A G  
Sbjct: 230 PPSTTPETSSTTPSTVTSSTSDPNAPTASDAASGTGTGTESSDTP-ASSAPPTSAASGPP 288

Query: 113 CSKKMDK 93
             K  DK
Sbjct: 289 APKSNDK 295


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 211 ICGGSLVSTRTVLTAGHC 264
           ICGG+L++ + VLTA HC
Sbjct: 61  ICGGTLITLKHVLTAAHC 78


>Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical
           protein F36H1.3 protein.
          Length = 597

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +2

Query: 80  LRRRIYPSSSSTPIQMPVSSEGPKLLQ-GATPT 175
           + + + PS S++P+  PVSS  P+L+Q   TPT
Sbjct: 521 VEKPVTPSPSASPLPSPVSSPAPQLVQKPTTPT 553


>Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical
           protein R09E10.9 protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 344 PPEFHSFVPTVTRRLMCKIPPAYTPATQCPAVSTVRV-DTSDPPQMKLLIRPLV 186
           PP+     PTV   ++  + P    A   P+VS   V  TS  PQ  L+++P V
Sbjct: 362 PPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSCAPQKPLVVQPPV 415


>Z49074-3|CAA88894.1|  176|Caenorhabditis elegans Hypothetical
           protein ZK971.1 protein.
          Length = 176

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 4   LVRIMYVKRLLIFCTAFIACSALPTPEETDLSIFFEHADPNARIVGGTEAAPGS 165
           L++I+ +  +L+F    I CS++P P +TDL   F     N    G  +  P S
Sbjct: 112 LIKII-INVVLMFLLIAI-CSSVPAPSQTDLKRIFREIAANENAYGVIQVVPYS 163


>Z48583-6|CAA88474.1|  176|Caenorhabditis elegans Hypothetical
           protein ZK971.1 protein.
          Length = 176

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 4   LVRIMYVKRLLIFCTAFIACSALPTPEETDLSIFFEHADPNARIVGGTEAAPGS 165
           L++I+ +  +L+F    I CS++P P +TDL   F     N    G  +  P S
Sbjct: 112 LIKII-INVVLMFLLIAI-CSSVPAPSQTDLKRIFREIAANENAYGVIQVVPYS 163


>U67954-2|AAB52606.1|  168|Caenorhabditis elegans Hypothetical
           protein F41D9.2 protein.
          Length = 168

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 442 KLSDAVRPIKLSYDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEACV 603
           +++  VR   + +  V +G+P   +GW  IG    +   L VI VR ++G   V
Sbjct: 26  QITYGVRGNTIHFRVVLTGIPPTGSGWTAIGFGNSMFSGLDVIVVRVLNGRVIV 79


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 214 CGGSLVSTRTVLTAGHCVA 270
           C G+L S R +LTA HC A
Sbjct: 75  CSGTLTSPRHILTATHCAA 93


>Z81044-11|CAB02809.2|  476|Caenorhabditis elegans Hypothetical
           protein C30H6.4 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
 Frame = -2

Query: 374 VIFLATVYSVP-PEFHSFVPTVTRRLMCKIP-----PAYTPATQCPAVSTVRVDTSDPPQ 213
           V+   TV S   P   +  PT T  +    P     P  T  T   + ST  + T+ PP 
Sbjct: 289 VVTTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPT 348

Query: 212 MKLLIRPLVRKTMWGWL 162
            ++ I         GW+
Sbjct: 349 TQIDIEKCTSNCPVGWI 365


>AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical
           protein E01A2.4 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 117 RSKCPYRR--RDRSCSREPPPHGFSDQRTNQEFHLW 218
           RSK P RR  R R  S  PP   + D+  N+   +W
Sbjct: 167 RSKSPPRRNYRQRQRSGSPPVRNWRDEEENRRAEMW 202


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
           protein T08A11.1 protein.
          Length = 1872

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 32  CLFFVRHSLRVPHFRLLRRRIYPSSSSTPIQMP--VSSEGPKLLQGATPTW 178
           C +F+ H +   ++++ RR          IQ+P  V S   K++ G+T T+
Sbjct: 666 CEYFIPHWMNYSYYQMARRSAISVQFRPRIQLPAAVLSAPKKMIMGSTGTF 716


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
           protein T08A11.1 protein.
          Length = 1872

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 32  CLFFVRHSLRVPHFRLLRRRIYPSSSSTPIQMP--VSSEGPKLLQGATPTW 178
           C +F+ H +   ++++ RR          IQ+P  V S   K++ G+T T+
Sbjct: 666 CEYFIPHWMNYSYYQMARRSAISVQFRPRIQLPAAVLSAPKKMIMGSTGTF 716


>AF125463-5|AAD12866.1|  317|Caenorhabditis elegans Hypothetical
           protein Y49F6C.4 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 13  IMYVKRLLIFCTAFIACSALPTPEETDLSIFFE 111
           ++Y+ R       F+ C++L   EET LSI+ E
Sbjct: 36  LLYINRKDDELAVFLGCNSLQGTEETTLSIYVE 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,950,032
Number of Sequences: 27780
Number of extensions: 370173
Number of successful extensions: 1270
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)