Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10d02f
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    71   1e-14
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   4.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 70.5 bits (165), Expect = 1e-14
 Identities = 53/157 (33%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
 Frame = +1

Query: 127 ARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINL 306
           +RIVGGT       P M  +        ICG +++S R VLTA HC+            L
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGMICGATIISKRYVLTAAHCIIDENT-----TKL 213

Query: 307 RVTVGTNEWNS-GGTEYTVARNIT----HPDFSLI----YLKNDIGLLITDEEVKLSDAV 459
            + VG ++W+S   T  TV  +I     HP + +I    +  NDI LL T++++K  D V
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273

Query: 460 RPIKLSYD-FVSS--GVPVRVAGWGRIGHREPLSEKL 561
            P  L +  F+ S  G  V V GWG       LS  L
Sbjct: 274 GPACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHIL 310


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 319 GTNEWNSGGTEYTVARNI 372
           GTN W+SG  +    RN+
Sbjct: 266 GTNHWDSGRRKSAAQRNV 283


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 172 GGGSLEQLRSLRRYGHLDRRARRRWINPSPQESE 71
           G   L Q  SL  YG  D    R+   P+P++ E
Sbjct: 151 GRDELSQPGSLNGYGSSDGCDARKKKGPTPRQQE 184


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 64  SALPTPEETDLSIFF 108
           S L TP++ D+ IFF
Sbjct: 409 SNLTTPDDPDIQIFF 423


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 536 CPILPHPATLTG 501
           CP+ P+P  LTG
Sbjct: 219 CPLNPNPQPLTG 230


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 73  PTPEETDLSIFFEHADPNARIVGGT 147
           P P E DL    +   P+A +VG T
Sbjct: 285 PDPGEVDLPPETQPTPPSATLVGTT 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,832
Number of Sequences: 438
Number of extensions: 4541
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)