SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c24f
         (365 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VP19 Cluster: CG7181-PA; n=5; Sophophora|Rep: CG7181-...    43   0.002
UniRef50_UPI0000F209A8 Cluster: PREDICTED: hypothetical protein;...    42   0.005
UniRef50_Q09JM4 Cluster: Cytochrome c oxidase polypeptide VIII; ...    40   0.019
UniRef50_Q4TC53 Cluster: Chromosome undetermined SCAF7053, whole...    37   0.099
UniRef50_Q692Y6 Cluster: Mitochondrial cytochrome c oxidase subu...    36   0.30 
UniRef50_UPI0000515C5B Cluster: PREDICTED: hypothetical protein;...    35   0.40 
UniRef50_UPI0000DA3DE3 Cluster: PREDICTED: similar to Daxx-like ...    33   1.6  
UniRef50_UPI0000E49890 Cluster: PREDICTED: similar to vitellogen...    33   2.1  
UniRef50_Q8NTE9 Cluster: Hypothetical membrane protein; n=1; Cor...    32   2.8  
UniRef50_Q9LSL5 Cluster: Receptor protein kinase-like protein; n...    32   3.7  
UniRef50_Q0RY70 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_UPI0000498967 Cluster: protein kinase; n=3; Entamoeba h...    31   8.6  

>UniRef50_Q9VP19 Cluster: CG7181-PA; n=5; Sophophora|Rep: CG7181-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 68

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +1

Query: 97  KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYR 249
           ++  Q R  SV+  PP  ++S  E + L G M      IPAWVL +I+ Y+
Sbjct: 15  RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>UniRef50_UPI0000F209A8 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 138

 Score = 41.5 bits (93), Expect = 0.005
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +1

Query: 97  KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYRDK 255
           +++  +RN S+   PP+NK+  G+   +  +  V   A   W+L +I  YR++
Sbjct: 80  RDIVHKRNSSIYSKPPKNKIGPGQSFLIMSVFAVALLAPAGWILHHIPEYRER 132


>UniRef50_Q09JM4 Cluster: Cytochrome c oxidase polypeptide VIII;
           n=2; Ixodoidea|Rep: Cytochrome c oxidase polypeptide
           VIII - Argas monolakensis
          Length = 69

 Score = 39.5 bits (88), Expect = 0.019
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
 Frame = +1

Query: 61  IRNLLRANNQIFKNVAQQ---RNMS-VICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVL 228
           + ++++ +  + +N   Q   R+M  +I TPPR ++S  E +     +  G  AIPAWVL
Sbjct: 1   MNSIVQRSCTVIRNTKMQVRYRSMCRMIVTPPRVRISTAEKVGHLVALTAGILAIPAWVL 60

Query: 229 VNIKHYRDK 255
           V++  Y+ K
Sbjct: 61  VHLGDYKKK 69


>UniRef50_Q4TC53 Cluster: Chromosome undetermined SCAF7053, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7053,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 176

 Score = 37.1 bits (82), Expect = 0.099
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 97  KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYRDK 255
           K V ++    +   PPRNK+   +  F+  +  V   A  AW+L ++  YR +
Sbjct: 117 KQVVKELRRKIYSKPPRNKIGAAQSFFVMSVFTVVMLAPAAWILHHLPEYRQR 169


>UniRef50_Q692Y6 Cluster: Mitochondrial cytochrome c oxidase subunit
           VIII-H; n=1; Branchiostoma belcheri tsingtauense|Rep:
           Mitochondrial cytochrome c oxidase subunit VIII-H -
           Branchiostoma belcheri tsingtauense
          Length = 71

 Score = 35.5 bits (78), Expect = 0.30
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +1

Query: 112 QRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYRDKQ 258
           Q+   ++  P +N +S  +    A  ++ G   IP W+L N+K Y+ K+
Sbjct: 23  QQRAGIMSEPAKNPMSSTDKAIGATAILAGVMGIPVWILCNLKRYQGKE 71


>UniRef50_UPI0000515C5B Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 70

 Score = 35.1 bits (77), Expect = 0.40
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +1

Query: 52  MFGIRNLLRANNQIFKNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLV 231
           MF ++ +             Q   S + TPPR +VS  E +     + VG  AIP ++  
Sbjct: 1   MFAVQKIANGAPLALNLYKTQCRTSFLGTPPRVRVSFTEKMLHGVALYVGLMAIPLYIAC 60

Query: 232 NIKHY 246
           N+K+Y
Sbjct: 61  NVKNY 65


>UniRef50_UPI0000DA3DE3 Cluster: PREDICTED: similar to Daxx-like
           protein CG9537-PA; n=2; Rattus norvegicus|Rep:
           PREDICTED: similar to Daxx-like protein CG9537-PA -
           Rattus norvegicus
          Length = 255

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 102 CRPTKEHERYLHSAKKQGFQR*DDLPRRPDGGGLVCHPSLGVGQYQALPRQ-AIKLSQK 275
           C P     +  H+ ++QG      LPR  D     C P  G+ Q Q  P++ AI L+++
Sbjct: 188 CSPGTGISQQQHAPQEQGSVNSSMLPRNRDQSTAACSPRTGISQQQHAPQEPAIALNKR 246



 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 102 CRPTKEHERYLHSAKKQGFQR*DDLPRRPDGGGLVCHPSLGVGQYQALPRQ 254
           C P     +  H+ ++QG      LPR  D     C P +G+ Q Q  P++
Sbjct: 13  CSPGTGISQQQHAPQEQGSVNSSMLPRNRDQSIAACSPGIGISQQQHAPQE 63



 Score = 31.9 bits (69), Expect = 3.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 102 CRPTKEHERYLHSAKKQGFQR*DDLPRRPDGGGLVCHPSLGVGQYQALPRQ 254
           C P     +  H+ ++QG      LPR  D     C P  G+ Q Q  P++
Sbjct: 83  CSPGTGISQQQHAPQEQGSVNSSMLPRNRDQSTAACSPGTGISQQQHAPQE 133



 Score = 31.9 bits (69), Expect = 3.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 102 CRPTKEHERYLHSAKKQGFQR*DDLPRRPDGGGLVCHPSLGVGQYQALPRQ 254
           C P     +  H+ ++QG      LPR  D     C P  G+ Q Q  P++
Sbjct: 118 CSPGTGISQQQHAPQEQGSVNSSMLPRNRDQSTAACSPGTGISQQQHAPQE 168



 Score = 31.9 bits (69), Expect = 3.7
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 102 CRPTKEHERYLHSAKKQGFQR*DDLPRRPDGGGLVCHPSLGVGQYQALPRQ 254
           C P     +  H+ ++QG      LPR  D     C P  G+ Q Q  P++
Sbjct: 153 CSPGTGISQQQHAPQEQGSVNSSMLPRNRDQSTAACSPGTGISQQQHAPQE 203



 Score = 31.1 bits (67), Expect = 6.5
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +3

Query: 102 CRPTKEHERYLHSAKKQGFQR*DDLPRRPDGGGLVCHPSLGVGQYQALPRQ 254
           C P     +  H+ ++QG      LPR  D     C P  G+ Q Q  P++
Sbjct: 48  CSPGIGISQQQHAPQEQGSVNSSMLPRNRDQSTAACSPGTGISQQQHAPQE 98


>UniRef50_UPI0000E49890 Cluster: PREDICTED: similar to vitellogenin;
            n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
            similar to vitellogenin - Strongylocentrotus purpuratus
          Length = 2186

 Score = 32.7 bits (71), Expect = 2.1
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 231  DQHPGWDGRPAH-HHQAGEEDH-LTSGNLVSWRSADNAHVPLLGDI 100
            D+H G  G   H HH + EE H L   N  S  S  + H  LLGD+
Sbjct: 1551 DEHHGLLGDVHHGHHSSSEEHHGLLGNNYHSHHSGSDEHHGLLGDV 1596



 Score = 31.5 bits (68), Expect = 4.9
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 231  DQHPGWDGRPAH-HHQAGEEDH-LTSGNLVSWRSADNAHVPLLGDI 100
            D+H G  G   H HH + EE H L   N     S+ + H  LLGD+
Sbjct: 1515 DEHHGLLGDVHHGHHSSSEEHHGLLGNNYHGHHSSSDEHHGLLGDV 1560



 Score = 31.1 bits (67), Expect = 6.5
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -3

Query: 231  DQHPGWDGRPAHHHQAGEEDH--LTSGNLVSWRSADNAHVPLLGDI 100
            D+H G  G   H H +G ++H  L   N     S  + H  LLGD+
Sbjct: 1317 DEHHGLLGNIHHGHHSGSDEHHGLLGDNYHGHHSGSDEHHGLLGDV 1362


>UniRef50_Q8NTE9 Cluster: Hypothetical membrane protein; n=1;
           Corynebacterium glutamicum|Rep: Hypothetical membrane
           protein - Corynebacterium glutamicum (Brevibacterium
           flavum)
          Length = 390

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +1

Query: 163 GEMIFLAGLMVVGWSAIPAWV 225
           GEM F  GL+++G+S IPAW+
Sbjct: 11  GEMHFWQGLLIIGFSFIPAWL 31


>UniRef50_Q9LSL5 Cluster: Receptor protein kinase-like protein; n=3;
           Arabidopsis thaliana|Rep: Receptor protein kinase-like
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 675

 Score = 31.9 bits (69), Expect = 3.7
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 255 LVAVMLDIDQHPGWDGRPAHHHQAGEEDHLTSGNLVSWRSADNA 124
           LV V  D   +PGWD      H     + L S N  SW ++ ++
Sbjct: 153 LVHVEFDTFNNPGWDPNDVGSHVGINNNSLVSSNYTSWNASSHS 196


>UniRef50_Q0RY70 Cluster: Putative uncharacterized protein; n=1;
           Rhodococcus sp. RHA1|Rep: Putative uncharacterized
           protein - Rhodococcus sp. (strain RHA1)
          Length = 302

 Score = 31.1 bits (67), Expect = 6.5
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 255 LVAVMLDIDQHPGWDGRPAHHHQ--AGEEDH 169
           + A+  DID+H   +GRP HHHQ   G + H
Sbjct: 1   MTALFTDIDRHAR-EGRPGHHHQRRRGRQPH 30


>UniRef50_UPI0000498967 Cluster: protein kinase; n=3; Entamoeba
           histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
           histolytica HM-1:IMSS
          Length = 2577

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = -1

Query: 155 TLFLGGVQI-TLMF--LCWATFLKIWLLARSKFLIPNILF 45
           T+F+G ++I TL +  LCW   +KI  L+ +K  + +ILF
Sbjct: 304 TIFIGNLEIGTLTYSKLCWFDSIKIGSLSNTKLSVNSILF 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,730,332
Number of Sequences: 1657284
Number of extensions: 5855667
Number of successful extensions: 17018
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16998
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -