Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c24f
(365 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p pro... 43 1e-04
AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA... 43 1e-04
BT023511-1|AAY84911.1| 671|Drosophila melanogaster LD05357p pro... 27 10.0
AY069190-1|AAL39335.1| 509|Drosophila melanogaster GH24215p pro... 27 10.0
AF276664-1|AAG29352.1| 671|Drosophila melanogaster comb gap pro... 27 10.0
AF276663-2|AAG29351.1| 375|Drosophila melanogaster comb gap spl... 27 10.0
AF276663-1|AAG29350.1| 671|Drosophila melanogaster comb gap pro... 27 10.0
AF181636-1|AAD55422.1| 682|Drosophila melanogaster BcDNA.GH0726... 27 10.0
AE014134-2078|AAS64682.1| 682|Drosophila melanogaster CG31705-P... 27 10.0
AE014134-2077|AAS64681.1| 682|Drosophila melanogaster CG31705-P... 27 10.0
AE014134-2076|AAF53106.2| 682|Drosophila melanogaster CG31705-P... 27 10.0
AE013599-1840|AAM70989.1| 629|Drosophila melanogaster CG8367-PC... 27 10.0
AE013599-1839|AAG22267.1| 671|Drosophila melanogaster CG8367-PD... 27 10.0
AE013599-1838|AAM70988.1| 671|Drosophila melanogaster CG8367-PA... 27 10.0
AE013599-1837|AAF58283.2| 772|Drosophila melanogaster CG8367-PB... 27 10.0
>AY118790-1|AAM50650.1| 68|Drosophila melanogaster GH15688p
protein.
Length = 68
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 97 KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYR 249
++ Q R SV+ PP ++S E + L G M IPAWVL +I+ Y+
Sbjct: 15 RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65
>AE014296-3570|AAF51742.1| 68|Drosophila melanogaster CG7181-PA
protein.
Length = 68
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 97 KNVAQQRNMSVICTPPRNKVSRGEMIFLAGLMVVGWSAIPAWVLVNIKHYR 249
++ Q R SV+ PP ++S E + L G M IPAWVL +I+ Y+
Sbjct: 15 RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65
>BT023511-1|AAY84911.1| 671|Drosophila melanogaster LD05357p
protein.
Length = 671
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AY069190-1|AAL39335.1| 509|Drosophila melanogaster GH24215p
protein.
Length = 509
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 257 AHHHQAGQQTHPQTITVVS 275
>AF276664-1|AAG29352.1| 671|Drosophila melanogaster comb gap
protein.
Length = 671
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AF276663-2|AAG29351.1| 375|Drosophila melanogaster comb gap splice
variant cg14 protein.
Length = 375
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 117 AHHHQAGQQTHPQTITVVS 135
>AF276663-1|AAG29350.1| 671|Drosophila melanogaster comb gap
protein.
Length = 671
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AF181636-1|AAD55422.1| 682|Drosophila melanogaster BcDNA.GH07269
protein.
Length = 682
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 177 PRRPDGGGLVCHPSLGVGQYQALPRQAIKLSQ 272
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>AE014134-2078|AAS64682.1| 682|Drosophila melanogaster CG31705-PC,
isoform C protein.
Length = 682
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 177 PRRPDGGGLVCHPSLGVGQYQALPRQAIKLSQ 272
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>AE014134-2077|AAS64681.1| 682|Drosophila melanogaster CG31705-PB,
isoform B protein.
Length = 682
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 177 PRRPDGGGLVCHPSLGVGQYQALPRQAIKLSQ 272
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>AE014134-2076|AAF53106.2| 682|Drosophila melanogaster CG31705-PA,
isoform A protein.
Length = 682
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 177 PRRPDGGGLVCHPSLGVGQYQALPRQAIKLSQ 272
P P GGG++C P G P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568
>AE013599-1840|AAM70989.1| 629|Drosophila melanogaster CG8367-PC,
isoform C protein.
Length = 629
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 377 AHHHQAGQQTHPQTITVVS 395
>AE013599-1839|AAG22267.1| 671|Drosophila melanogaster CG8367-PD,
isoform D protein.
Length = 671
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AE013599-1838|AAM70988.1| 671|Drosophila melanogaster CG8367-PA,
isoform A protein.
Length = 671
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 419 AHHHQAGQQTHPQTITVVS 437
>AE013599-1837|AAF58283.2| 772|Drosophila melanogaster CG8367-PB,
isoform B protein.
Length = 772
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 201 AHHHQAGEEDHLTSGNLVS 145
AHHHQAG++ H + +VS
Sbjct: 520 AHHHQAGQQTHPQTITVVS 538
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,972,694
Number of Sequences: 53049
Number of extensions: 275333
Number of successful extensions: 1104
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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