Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c21r
         (640 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4FLJ4 Cluster: Galactofuranosyl transferase; n=6; Acti...    34   3.3  
UniRef50_Q72KK4 Cluster: Hypothetical conserved protein; n=7; Th...    33   7.7  
UniRef50_A6G607 Cluster: Nicotinate phosphoribosyltransferase re...    33   7.7  

>UniRef50_A4FLJ4 Cluster: Galactofuranosyl transferase; n=6;
           Actinomycetales|Rep: Galactofuranosyl transferase -
           Saccharopolyspora erythraea (strain NRRL 23338)
          Length = 657

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 474 TVSWFAARSIFPAHAWSRVTTLRRSRENLQLEQYGVIQ-KRDRLSGG 337
           TVS+ A  + FPA  W R TT+   R NL LE  G +   R R  GG
Sbjct: 83  TVSFSAYFNAFPAGYWRRWTTITAIRLNLMLEGPGRVDVYRSRADGG 129


>UniRef50_Q72KK4 Cluster: Hypothetical conserved protein; n=7;
           Thermus thermophilus|Rep: Hypothetical conserved protein
           - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM
           7039)
          Length = 315

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
 Frame = -2

Query: 486 QGILTVSWFAARSIFP---AHAWSRVTTLRRSR--ENLQLEQYGVIQ--KRDRLSG 340
           +G+L  +W+AAR +      H W  VT LR +R  + +QL ++G  +  K  RL G
Sbjct: 147 EGVLFDAWYAARQVLEWLHVHGWPFVTRLRSNRVLDGVQLRRHGGTRWVKTGRLRG 202


>UniRef50_A6G607 Cluster: Nicotinate phosphoribosyltransferase
           related protein; n=1; Plesiocystis pacifica SIR-1|Rep:
           Nicotinate phosphoribosyltransferase related protein -
           Plesiocystis pacifica SIR-1
          Length = 510

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +3

Query: 363 VSRRTAPTEDFPATAEAL*RDSTRELER*IWQRTMKLSRSPVQLRHEAILQPRRISNA 536
           V  R A   D PA        + R   R  W+R +KLS +P++     ILQ RR+ +A
Sbjct: 332 VGTRLATAYDQPALGGVYKLSALRPDARAPWRRMVKLSSTPIKTSTPGILQVRRMRDA 389


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,502,703
Number of Sequences: 1657284
Number of extensions: 12143704
Number of successful extensions: 27579
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27576
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)